BLASTX nr result
ID: Cocculus22_contig00018172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00018172
(329 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007198929.1| hypothetical protein PRUPE_ppa001197mg [Prun... 104 1e-20
ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [A... 103 3e-20
ref|XP_002517890.1| conserved hypothetical protein [Ricinus comm... 101 1e-19
ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp.... 100 2e-19
ref|XP_004505563.1| PREDICTED: putative DNA repair and recombina... 100 2e-19
ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Caps... 100 2e-19
ref|XP_006367475.1| PREDICTED: putative DNA repair and recombina... 100 3e-19
ref|XP_006494797.1| PREDICTED: putative DNA repair and recombina... 99 5e-19
ref|XP_006494796.1| PREDICTED: putative DNA repair and recombina... 99 5e-19
ref|XP_006432394.1| hypothetical protein CICLE_v10003508mg [Citr... 99 5e-19
gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana] 99 5e-19
ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis tha... 99 5e-19
ref|XP_004243362.1| PREDICTED: putative DNA repair and recombina... 99 6e-19
ref|XP_004243361.1| PREDICTED: putative DNA repair and recombina... 99 6e-19
ref|XP_003562297.1| PREDICTED: putative DNA repair and recombina... 99 6e-19
gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japo... 99 8e-19
ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group] g... 99 8e-19
ref|XP_007043622.1| Switch 2 [Theobroma cacao] gi|508707557|gb|E... 98 1e-18
gb|EMS60403.1| Putative DNA repair and recombination protein RAD... 98 1e-18
ref|XP_004303097.1| PREDICTED: putative DNA repair and recombina... 98 1e-18
>ref|XP_007198929.1| hypothetical protein PRUPE_ppa001197mg [Prunus persica]
gi|462394224|gb|EMJ00128.1| hypothetical protein
PRUPE_ppa001197mg [Prunus persica]
Length = 884
Score = 104 bits (260), Expect = 1e-20
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY+LYK+NHGG+LGDDMGLGKTIQTIAFLA+V GND
Sbjct: 126 QVPASINCRLLEHQREGVKFLYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVFGND 181
>ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [Amborella trichopoda]
gi|548857193|gb|ERN15007.1| hypothetical protein
AMTR_s00032p00230880 [Amborella trichopoda]
Length = 827
Score = 103 bits (256), Expect = 3e-20
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGNDVE 327
QVPA INCRLLEHQR+GVRFLY LYK+NHGG+LGDDMGLGKTIQTIAFL +V+G D E
Sbjct: 115 QVPASINCRLLEHQREGVRFLYGLYKNNHGGILGDDMGLGKTIQTIAFLVAVLGADAE 172
>ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis]
gi|223542872|gb|EEF44408.1| conserved hypothetical
protein [Ricinus communis]
Length = 870
Score = 101 bits (251), Expect = 1e-19
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGNDVE 327
QVPA INCRLLEHQR+GV+FLY LY++NHGGVLGDDMGLGKTIQTIAFLA+V G D E
Sbjct: 136 QVPASINCRLLEHQREGVKFLYKLYRNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDGE 193
>ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335315|gb|EFH65732.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 876
Score = 100 bits (250), Expect = 2e-19
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+F+Y+LYK+NHGG+LGDDMGLGKTIQTIAFLA V G D
Sbjct: 131 QVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAGVYGKD 186
>ref|XP_004505563.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Cicer arietinum]
Length = 911
Score = 100 bits (249), Expect = 2e-19
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 148 LQQVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGNDVE 327
L QVPA INCRLLEHQR GV+FLYDLYK+NHGG+LGDDMGLGKTIQTIAFLA++ + E
Sbjct: 157 LVQVPASINCRLLEHQRVGVKFLYDLYKNNHGGILGDDMGLGKTIQTIAFLAAIFAKEGE 216
>ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Capsella rubella]
gi|482575461|gb|EOA39648.1| hypothetical protein
CARUB_v10008286mg [Capsella rubella]
Length = 860
Score = 100 bits (249), Expect = 2e-19
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGNDVE 327
+VPA INCRLLEHQR+G++FLY+LYK+NHGG+LGDDMGLGKTIQTIAFLA V G D E
Sbjct: 131 KVPASINCRLLEHQREGIKFLYNLYKNNHGGILGDDMGLGKTIQTIAFLAGVYGKDGE 188
>ref|XP_006367475.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Solanum tuberosum]
Length = 888
Score = 100 bits (248), Expect = 3e-19
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +1
Query: 148 LQQVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
L QVPA INCRLLEHQR+GV+FLY LY++NHGGVLGDDMGLGKTIQ+IAFLA+V G D
Sbjct: 124 LVQVPASINCRLLEHQREGVKFLYSLYRNNHGGVLGDDMGLGKTIQSIAFLAAVYGKD 181
>ref|XP_006494797.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform X2 [Citrus sinensis]
gi|568884184|ref|XP_006494798.1| PREDICTED: putative DNA
repair and recombination protein RAD26-like isoform X3
[Citrus sinensis]
Length = 879
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY LYK+ HGG+LGDDMGLGKTIQTIAFLA+V G D
Sbjct: 120 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 175
>ref|XP_006494796.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform X1 [Citrus sinensis]
Length = 882
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY LYK+ HGG+LGDDMGLGKTIQTIAFLA+V G D
Sbjct: 123 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 178
>ref|XP_006432394.1| hypothetical protein CICLE_v10003508mg [Citrus clementina]
gi|557534516|gb|ESR45634.1| hypothetical protein
CICLE_v10003508mg [Citrus clementina]
Length = 890
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY LYK+ HGG+LGDDMGLGKTIQTIAFLA+V G D
Sbjct: 127 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 182
>gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana]
Length = 874
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = +1
Query: 157 VPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
VPA INCRLLEHQR+GV+F+Y+LYK+NHGG+LGDDMGLGKTIQTIAFLA+V G D
Sbjct: 143 VPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKD 197
>ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis thaliana]
gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis
thaliana]
Length = 862
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = +1
Query: 157 VPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
VPA INCRLLEHQR+GV+F+Y+LYK+NHGG+LGDDMGLGKTIQTIAFLA+V G D
Sbjct: 131 VPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKD 185
>ref|XP_004243362.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform 2 [Solanum lycopersicum]
Length = 836
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY LY++NHGGVLGDDMGLGKTIQ+IAFLA+V G D
Sbjct: 103 QVPASINCRLLEHQREGVKFLYSLYQNNHGGVLGDDMGLGKTIQSIAFLAAVYGKD 158
>ref|XP_004243361.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform 1 [Solanum lycopersicum]
Length = 852
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLLEHQR+GV+FLY LY++NHGGVLGDDMGLGKTIQ+IAFLA+V G D
Sbjct: 125 QVPASINCRLLEHQREGVKFLYSLYQNNHGGVLGDDMGLGKTIQSIAFLAAVYGKD 180
>ref|XP_003562297.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Brachypodium distachyon]
Length = 851
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVP INCRLL HQR GVRFLY+LY++NHGGVLGDDMGLGKTIQTIAFL+SVIG D
Sbjct: 119 QVPPSINCRLLAHQRVGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKD 174
>gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group]
Length = 947
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVP+ INCRLL HQR GVRFLY+LY++NHGGVLGDDMGLGKTIQTIAFL++VIG D
Sbjct: 214 QVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKD 269
>ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa
Japonica Group] gi|113578572|dbj|BAF16935.1|
Os05g0247900 [Oryza sativa Japonica Group]
gi|125551533|gb|EAY97242.1| hypothetical protein
OsI_19162 [Oryza sativa Indica Group]
gi|215701224|dbj|BAG92648.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 856
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVP+ INCRLL HQR GVRFLY+LY++NHGGVLGDDMGLGKTIQTIAFL++VIG D
Sbjct: 123 QVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKD 178
>ref|XP_007043622.1| Switch 2 [Theobroma cacao] gi|508707557|gb|EOX99453.1| Switch 2
[Theobroma cacao]
Length = 886
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGNDVE 327
QVPA INCRLL HQR+GV+FL+ LYK+NHGGVLGDDMGLGKTIQTIAFLA+V G D E
Sbjct: 136 QVPASINCRLLAHQREGVKFLFMLYKNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDEE 193
>gb|EMS60403.1| Putative DNA repair and recombination protein RAD26-like protein
[Triticum urartu]
Length = 859
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +1
Query: 148 LQQVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
++ VP INCRLL HQR GVRFLY+LY++NHGGVLGDDMGLGKTIQTIAFL+SVIG D
Sbjct: 112 VRNVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKD 169
>ref|XP_004303097.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Fragaria vesca subsp. vesca]
Length = 862
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 154 QVPA*INCRLLEHQRKGVRFLYDLYKDNHGGVLGDDMGLGKTIQTIAFLASVIGND 321
QVPA INCRLL HQR+GV+FLY +YK+NHGGVLGDDMGLGKTIQTIAFLA+V G D
Sbjct: 104 QVPASINCRLLLHQREGVKFLYRIYKNNHGGVLGDDMGLGKTIQTIAFLAAVFGKD 159