BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018123
         (1053 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...   245   2e-62
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   244   4e-62
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu...   243   7e-62
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei...   242   2e-61
gb|ACG35575.1| DNA binding protein [Zea mays]                         238   4e-60
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392...   237   7e-60
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB...   237   7e-60
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote...   236   2e-59
ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4...   234   6e-59
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei...   233   1e-58
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S...   233   1e-58
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps...   232   2e-58
gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus...   232   2e-58
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps...   231   3e-58
gb|AGE44298.1| whirly transcription factor domain containing pro...   230   8e-58
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi...   229   1e-57
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi...   228   2e-57
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...   228   2e-57
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops...   227   5e-57
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...   227   5e-57

>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score =  245 bits (626), Expect = 2e-62
 Identities = 134/240 (55%), Positives = 165/240 (68%), Gaps = 9/240 (3%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPNPG-NGSGILYAD 217
           M++LSRFL S         +  K+ D+K  LW      +  +ST A N   N S   +A 
Sbjct: 1   MLRLSRFLPS---------TSRKVSDLKDVLWSGSVTFEHALSTSAANVDENASARKFAS 51

Query: 218 YTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSA 397
           YT+FKGKAALSISPILP FTK +SG  RV K GS++L F PA+G+R+YDY KKQ FALS 
Sbjct: 52  YTVFKGKAALSISPILPNFTKIESGGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSP 111

Query: 398 TELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSED-GYFFTLTVANSLLKTN 574
           TE+GSLISL  A+SCEFFHDPSMKSS+ GQV+KSLS+TPL  D GYF  +TV N++ KTN
Sbjct: 112 TEVGSLISLGSAESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTN 171

Query: 575 ERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLS---PNLEWDR 745
           ER +VPVTKAEF VM+T+ S+ LPHIMGW Q  T  P S  A  S+  +    P+ EW+R
Sbjct: 172 ERLSVPVTKAEFAVMRTALSYALPHIMGWDQALTSHPQSPTAPASKPRVERPHPDSEWER 231


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  244 bits (623), Expect = 4e-62
 Identities = 131/238 (55%), Positives = 168/238 (70%), Gaps = 7/238 (2%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPNPGNGSGILYADY 220
           M +LSRF+ S         S  ++ D+K ALW      Q  +ST+A +  N SG  +A Y
Sbjct: 1   MQRLSRFVPS---------SSRRVTDLKDALWSGSLTFQHALSTFAADE-NTSGRKFASY 50

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           T+FKGKAALS+ PILP+F+K +SG  RV+K GS++L F PA+G+RKYDY KKQ FALS T
Sbjct: 51  TVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPT 110

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSED-GYFFTLTVANSLLKTNE 577
           E+GSLISL PA+SCEFFHDPSMKSS+ GQV+KSLSVTPL  D GYF  +TV N+L KT E
Sbjct: 111 EVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTE 170

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQ-FSTQSPGSNQARQSEVNL-SPNLEWDR 745
           R ++P++KAEFTVM+T+ SF LPHI+GW Q  +   P  + A +  V    P+ EW+R
Sbjct: 171 RLSLPISKAEFTVMRTALSFALPHILGWDQALTNHQPSPSPASKPRVERPHPDSEWER 228


>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
           gi|118484514|gb|ABK94132.1| unknown [Populus
           trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
           protein POPTR_0003s04700g [Populus trichocarpa]
          Length = 229

 Score =  243 bits (621), Expect = 7e-62
 Identities = 135/237 (56%), Positives = 173/237 (72%), Gaps = 6/237 (2%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCA-LWKSQSGISTYAPNPGNGSGI---LYADY 220
           MMKLSRFL   R +V +   P+ + D         Q+ IST     G  S I   ++A Y
Sbjct: 1   MMKLSRFLNFNRNAVGK---PTDVRDGSALHALTFQASIST-----GGKSSIQDRVFAPY 52

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           ++FKGKAALS+ P+LPTF+K  SG LRVD++GS++L F PAIGERKYDYEK+Q FALSAT
Sbjct: 53  SVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSAT 112

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSLLKTNE 577
           E+GSLIS  P  SCEFFHDPSM SSNAGQVRK+LS+ P ++  GYF +L+V N++LKT E
Sbjct: 113 EVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTE 172

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVN-LSPNLEWDR 745
           RFTVPVT AEFTV++T+ SF LPHIMGW + +T  PG+  ++ S+V+   P+LEWD+
Sbjct: 173 RFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 229


>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like [Setaria italica]
          Length = 229

 Score =  242 bits (617), Expect = 2e-61
 Identities = 130/238 (54%), Positives = 166/238 (69%), Gaps = 7/238 (2%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPN-PGNGSGILYAD 217
           M++LSRFL S         +  +  D K ALW      Q  +ST A N   N SG  +A 
Sbjct: 1   MLRLSRFLPS---------ASRRGFDPKEALWSGSLTFQQAVSTSAANLDENSSGKKFAS 51

Query: 218 YTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSA 397
           YT+FKGKAALSI PILP+F K +SGA R+++ GS++L F PA+G+RKYDY KKQ F+LS 
Sbjct: 52  YTVFKGKAALSIHPILPSFCKMESGASRINRNGSVMLTFFPAVGQRKYDYTKKQLFSLSP 111

Query: 398 TELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTN 574
           TE+GSLISL PA+SCEFFHDPSMKSS+ GQV+KSLS+TPL S+ GYF  +TV N++ KT 
Sbjct: 112 TEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSITPLGSDSGYFVNITVLNNMQKTT 171

Query: 575 ERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNL-SPNLEWDR 745
           +R +VP+TKAEF VM+T+ SF LPHIMGW Q  T+ P    + +  V    P+ EW+R
Sbjct: 172 DRLSVPITKAEFAVMRTALSFALPHIMGWDQVLTRHPAPQASSKPRVERPHPDSEWER 229


>gb|ACG35575.1| DNA binding protein [Zea mays]
          Length = 230

 Score =  238 bits (606), Expect = 4e-60
 Identities = 132/238 (55%), Positives = 163/238 (68%), Gaps = 7/238 (2%)
 Frame = +2

Query: 53  MMKLSRFLIS---RRISVSENLSPSKIDDVKCALWKSQSGISTYAPN-PGNGSGILYADY 220
           M++LSRFL S   R   + E+L         C     Q  +ST A N  GN SG  +A Y
Sbjct: 1   MLRLSRFLPSACRRGFDLKESLW--------CGSLTFQQAVSTAATNLDGNLSGKKFASY 52

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           T+FKGKAALSI PILP+F+K +SG  RV K GS++L F PA+G+RKYDY KKQ FALS T
Sbjct: 53  TVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPT 112

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTNE 577
           E+GSLISL PA+SCEFFHDPSMKSSN G V+KSLS+TPL S+ GYF  +TV NS  +TN+
Sbjct: 113 EVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTND 172

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQA--RQSEVNLSPNLEWDR 745
           R +VP+TKAEF V++T+ SF LPHIMGW Q  T    +  A  R +     P+ EW+R
Sbjct: 173 RLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHPAPPASSRPTVERPHPDSEWER 230


>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
           gi|413926544|gb|AFW66476.1| DNA binding protein isoform
           2 [Zea mays]
          Length = 274

 Score =  237 bits (604), Expect = 7e-60
 Identities = 133/243 (54%), Positives = 166/243 (68%), Gaps = 12/243 (4%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPN-PGNGSGILYAD 217
           M++LSRFL S         +  +  D+K +LW      Q  +ST A N  GN SG  +A 
Sbjct: 43  MLRLSRFLPS---------ACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFAS 93

Query: 218 YTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSA 397
           YT+FKGKAALSI PILP+F+K +SG  RV K GS++L F PA+G+RKYDY KKQ FALS 
Sbjct: 94  YTVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSP 153

Query: 398 TELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTN 574
           TE+GSLISL PA+SCEFFHDPSMKSSN G V+KSLS+TPL S+ GYF  +TV NS  +TN
Sbjct: 154 TEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTN 213

Query: 575 ERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQ------SPGSNQARQSEVNLSPNLE 736
           +R +VP+TKAEF V++T+ SF LPHIMGW Q  T        P S  +R +     P+ E
Sbjct: 214 DRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHPAPAPPAS--SRPTVERPHPDSE 271

Query: 737 WDR 745
           W+R
Sbjct: 272 WER 274


>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
           transcription factor [Zea mays]
           gi|323388771|gb|ADX60190.1| PBF-2 like transcription
           factor [Zea mays]
          Length = 232

 Score =  237 bits (604), Expect = 7e-60
 Identities = 133/243 (54%), Positives = 166/243 (68%), Gaps = 12/243 (4%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPN-PGNGSGILYAD 217
           M++LSRFL S         +  +  D+K +LW      Q  +ST A N  GN SG  +A 
Sbjct: 1   MLRLSRFLPS---------ACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFAS 51

Query: 218 YTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSA 397
           YT+FKGKAALSI PILP+F+K +SG  RV K GS++L F PA+G+RKYDY KKQ FALS 
Sbjct: 52  YTVFKGKAALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSP 111

Query: 398 TELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTN 574
           TE+GSLISL PA+SCEFFHDPSMKSSN G V+KSLS+TPL S+ GYF  +TV NS  +TN
Sbjct: 112 TEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTN 171

Query: 575 ERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQ------SPGSNQARQSEVNLSPNLE 736
           +R +VP+TKAEF V++T+ SF LPHIMGW Q  T        P S  +R +     P+ E
Sbjct: 172 DRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHPAPAPPAS--SRPTVERPHPDSE 229

Query: 737 WDR 745
           W+R
Sbjct: 230 WER 232


>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
           mitochondrial-like [Oryza brachyantha]
          Length = 230

 Score =  236 bits (601), Expect = 2e-59
 Identities = 127/240 (52%), Positives = 165/240 (68%), Gaps = 9/240 (3%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPNPGNGSGILYADY 220
           M +LSRF  +         S  ++ D+K ALW      Q  +ST + +  N SG  +A Y
Sbjct: 1   MQRLSRFGFAPS-------SSRRVTDLKDALWSGSLTFQHALSTLSADE-NTSGRKFASY 52

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           T+FKGKAALS+ P+LP+F+K +SG  RV + GS++L F PA+G+RKYDY KKQ FALS T
Sbjct: 53  TVFKGKAALSMHPVLPSFSKLESGGSRVSRNGSVMLTFFPAVGQRKYDYSKKQIFALSPT 112

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSED-GYFFTLTVANSLLKTNE 577
           E+GSLISL PA+SCEFFHDPSMKSS+ GQV+KSLSVTPL  D GYF  +TV N+L KT E
Sbjct: 113 EVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTE 172

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFST----QSPGSNQARQSEVNLSPNLEWDR 745
           R ++P+TKAEF VM+T+ SF LPHI+GW Q  T      P +++ R    +  P+ EW+R
Sbjct: 173 RLSLPITKAEFAVMRTTLSFALPHILGWDQVLTNHHPSPPAASKPRAERPH--PDSEWER 230


>ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding
           protein [Zea mays]
          Length = 232

 Score =  234 bits (596), Expect = 6e-59
 Identities = 132/243 (54%), Positives = 165/243 (67%), Gaps = 12/243 (4%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKS----QSGISTYAPN-PGNGSGILYAD 217
           M++LSRFL S         +  +  D+K +LW      Q  +ST A N  GN SG  +A 
Sbjct: 1   MLRLSRFLPS---------ACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFAS 51

Query: 218 YTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSA 397
           YT+FKGKAALSI PIL +F+K +SG  RV K GS++L F PA+G+RKYDY KKQ FALS 
Sbjct: 52  YTVFKGKAALSIHPILXSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSP 111

Query: 398 TELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTN 574
           TE+GSLISL PA+SCEFFHDPSMKSSN G V+KSLS+TPL S+ GYF  +TV NS  +TN
Sbjct: 112 TEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTN 171

Query: 575 ERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQ------SPGSNQARQSEVNLSPNLE 736
           +R +VP+TKAEF V++T+ SF LPHIMGW Q  T        P S  +R +     P+ E
Sbjct: 172 DRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHPAPAPPAS--SRPTVERPHPDSE 229

Query: 737 WDR 745
           W+R
Sbjct: 230 WER 232


>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 240

 Score =  233 bits (594), Expect = 1e-58
 Identities = 127/241 (52%), Positives = 166/241 (68%), Gaps = 10/241 (4%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKI----DDVKCALWKSQSGISTYAPN---PGNGSGILY 211
           MMKLSR L+S R  +SE L   +     D +K  +  SQ+G+ST   +    G+  G ++
Sbjct: 1   MMKLSRSLLSSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIF 60

Query: 212 ADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFAL 391
           A Y ++KGKAA S+ P+LPTF K  SG L+V +KG ILL F+PAIGERKYD+ KKQ FAL
Sbjct: 61  APYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFAL 120

Query: 392 SATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSEDGYFFTLTVANSLLKT 571
           S TE+GSL+++ P  S EFFHDP+M SSNAGQ+RKSLS+   + DG+F +L VAN++LKT
Sbjct: 121 SPTEVGSLLTMGPRDSSEFFHDPAMLSSNAGQMRKSLSI-KANADGFFISLNVANNILKT 179

Query: 572 NERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLSP---NLEWD 742
           NERF VPVT AEF VM+T+ SF LPH+MGW + + Q P S+    S   +     NLEWD
Sbjct: 180 NERFVVPVTTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLEWD 239

Query: 743 R 745
           +
Sbjct: 240 K 240


>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
           gi|241933167|gb|EES06312.1| hypothetical protein
           SORBIDRAFT_04g004060 [Sorghum bicolor]
          Length = 230

 Score =  233 bits (594), Expect = 1e-58
 Identities = 131/238 (55%), Positives = 160/238 (67%), Gaps = 7/238 (2%)
 Frame = +2

Query: 53  MMKLSRFLIS---RRISVSENLSPSKIDDVKCALWKSQSGISTYAPN-PGNGSGILYADY 220
           M++LSRFL S   R   + E+L    +          Q  +ST A N   N S   YA Y
Sbjct: 1   MLRLSRFLPSASRRGFDLKESLLSGSLT--------FQQAVSTSAANIDDNLSSKKYASY 52

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           T+FKGKAALSI PILP+F+K +SG  RV + GSI+L F PA+G RKYD+ KKQ FALS T
Sbjct: 53  TVFKGKAALSIQPILPSFSKLESGGSRVSRNGSIMLTFFPAVGPRKYDFTKKQLFALSPT 112

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPL-SEDGYFFTLTVANSLLKTNE 577
           E+GSLISL PA+SCEFFHDPSMKSSN G V+KSLS+TPL S+ GYF  +TV NS+ KTN+
Sbjct: 113 EVGSLISLGPAESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTND 172

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQA--RQSEVNLSPNLEWDR 745
           R +VP+TKAEF VM+T+ SF LPHIMGW Q  T    S  A  +       P+ EW+R
Sbjct: 173 RLSVPITKAEFAVMRTTLSFALPHIMGWDQALTNHHPSPPAISKPRVERPHPDSEWER 230


>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571468|gb|EOA35656.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 234

 Score =  232 bits (592), Expect = 2e-58
 Identities = 128/239 (53%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKC----ALWKSQSGISTYAPNPGNGSGILYADY 220
           MMK +R L+SR +    + S S  D        A W + SG S         SG ++A Y
Sbjct: 1   MMKQARTLLSRSLC---DQSKSLFDGASTLRGFASWSTGSGFS--GKEAAKPSGRVFAPY 55

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
            IFKGKAALS+ P+LPTFT+  SG LR+D++GS+++ F PA GERKYD+EKKQ FALS T
Sbjct: 56  AIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPT 115

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSLLKTNE 577
           E+GSLIS+    S EFFHDPSMKSSNAGQVRKSLS+ P ++  GYF +L V NS+LKTN+
Sbjct: 116 EVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTND 175

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLSP---NLEWDR 745
           R  VPVT AEFTVM+T+FSF+LPH+MGW + + Q     Q   S  N  P     EWD+
Sbjct: 176 RIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDPQQLEQEWDK 234


>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
          Length = 236

 Score =  232 bits (591), Expect = 2e-58
 Identities = 127/241 (52%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
 Frame = +2

Query: 53  MMKLSRFLISRR----ISVSENLSPSKIDDVKCALWKSQSGISTYAPNPGNGSGILYADY 220
           M+KLSR L+       +S+   +S + ID        +QSGIST     G  +  ++A Y
Sbjct: 1   MLKLSRLLLQSSSRDSLSLKSLVSEATIDLKLLRGLTTQSGIST-----GKSAAKVFAPY 55

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
           +I+KGKAALS  P+LP FTK QSG  +V+++GSI+L F PAIGERKYD++K+Q FALSAT
Sbjct: 56  SIYKGKAALSADPLLPMFTKLQSGGYKVERRGSIMLTFWPAIGERKYDWDKRQKFALSAT 115

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSLLKTNE 577
           E+GSLISL    SCEFFHDPSM SSNAGQVRKSLS+   ++  GYF +L+V N++LKTN+
Sbjct: 116 EVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTND 175

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSP-----GSNQARQSEVNLSPNLEWD 742
           RF VPVT AEF VM+T+F+F LPH++GW Q++ Q P      S  A  + +   P+ EWD
Sbjct: 176 RFVVPVTTAEFAVMRTAFTFALPHLIGWDQYTNQVPHCASKSSPTAAAAALPQLPSSEWD 235

Query: 743 R 745
           R
Sbjct: 236 R 236


>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571469|gb|EOA35657.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 235

 Score =  231 bits (590), Expect = 3e-58
 Identities = 128/239 (53%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKC----ALWKSQSGISTYAPNPGNGSGILYADY 220
           MMK +R L+SR +    + S S  D        A W + SG S         SG ++A Y
Sbjct: 1   MMKQARTLLSRSLC---DQSKSLFDGASTLRGFASWSTGSGFSG-KEEAAKPSGRVFAPY 56

Query: 221 TIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSAT 400
            IFKGKAALS+ P+LPTFT+  SG LR+D++GS+++ F PA GERKYD+EKKQ FALS T
Sbjct: 57  AIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPT 116

Query: 401 ELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSLLKTNE 577
           E+GSLIS+    S EFFHDPSMKSSNAGQVRKSLS+ P ++  GYF +L V NS+LKTN+
Sbjct: 117 EVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTND 176

Query: 578 RFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLSP---NLEWDR 745
           R  VPVT AEFTVM+T+FSF+LPH+MGW + + Q     Q   S  N  P     EWD+
Sbjct: 177 RIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDPQQLEQEWDK 235


>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
           Group]
          Length = 245

 Score =  230 bits (586), Expect = 8e-58
 Identities = 127/243 (52%), Positives = 161/243 (66%), Gaps = 21/243 (8%)
 Frame = +2

Query: 80  SRRISVSENLSPSKIDDVKCALW-KSQSGISTYAPN---------------PGNGSGILY 211
           SR +S S  L   +  +VK + W  SQ  IST  P                 G+ S   Y
Sbjct: 5   SRFLSCSSILE--RATNVKDSFWLSSQRSISTSGPGLVNDGSSSVRPPFSPTGSSSVRRY 62

Query: 212 ADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFAL 391
            +YT+FKGKAALS+SPILPTF +  SG  RV KKG ++L F PAIG+RKYD++KKQ FAL
Sbjct: 63  VEYTVFKGKAALSVSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFAL 122

Query: 392 SATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSED-GYFFTLTVANSLLK 568
           S TE+GSLI L PA+SCEFFHDPSMKSS  GQV+KSLS++PL++  GY   L+V N++ K
Sbjct: 123 SPTEVGSLIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQK 182

Query: 569 TNERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQA----RQSEVNLSPNLE 736
           TNERF++PV+KAEFT ++T FS++LPHIMGW Q ++  P S        Q E    P+LE
Sbjct: 183 TNERFSLPVSKAEFTAIRTVFSYVLPHIMGWSQAASPQPPSTATHTPKEQIEERPDPSLE 242

Query: 737 WDR 745
           W R
Sbjct: 243 WGR 245


>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
           gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=AtWHY2; Flags: Precursor
           gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
           thaliana] gi|21689867|gb|AAM67494.1| unknown protein
           [Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
           protein WHY2 [Arabidopsis thaliana]
          Length = 238

 Score =  229 bits (584), Expect = 1e-57
 Identities = 130/245 (53%), Positives = 166/245 (67%), Gaps = 14/245 (5%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALWKSQSGISTYAPNPGNG---------SGI 205
           MMK +R L+SR +    + S S  +      + S S  ST    PG G         SG 
Sbjct: 1   MMKQARSLLSRSLC---DQSKSLFEASTLRGFASWSNSST----PGRGFPGKDAAKPSGR 53

Query: 206 LYADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCF 385
           L+A Y+IFKGKAALS+ P+LP+FT+  SG LR+D++GS+++ F PAIGERKYD+EKKQ F
Sbjct: 54  LFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKF 113

Query: 386 ALSATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSL 562
           ALS TE+GSLIS+    S EFFHDPSMKSSNAGQVRKSLSV P ++  GYF +L+V NS+
Sbjct: 114 ALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSI 173

Query: 563 LKTNERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQF----STQSPGSNQARQSEVNLSPN 730
           LKTN+ F VPVTKAEF VM+T+FSF LPHIMGW++     +T++  S      +      
Sbjct: 174 LKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLE 233

Query: 731 LEWDR 745
           LEWD+
Sbjct: 234 LEWDK 238


>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  228 bits (582), Expect = 2e-57
 Identities = 128/246 (52%), Positives = 168/246 (68%), Gaps = 15/246 (6%)
 Frame = +2

Query: 53  MMKLSRFLISRRI-SVSENLSPSKIDDVKCALWKSQSGISTYAPNPGNG---------SG 202
           MMK +R L+SR +   S++L   ++       + S S  ST    PG G         SG
Sbjct: 1   MMKQARTLLSRSLCDHSKSLFEERVKASTLRGFASWSSSST----PGRGFSGKDAPKPSG 56

Query: 203 ILYADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQC 382
            L+A Y+IFKGKAALS+ P+LP+FT+  SG LR+D++GS+++ F PAIGERKYD+EKKQ 
Sbjct: 57  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 116

Query: 383 FALSATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANS 559
           FALS TE+GSLIS+    S EFFHDPSMKSSNAGQVRKSLS+ P ++  GYF +L+V N 
Sbjct: 117 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSVNNG 176

Query: 560 LLKTNERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLSPN--- 730
           +LKTN+ F VPVTKAEF VM+T+FSF LPHIMGW++ + Q        ++  +L  +   
Sbjct: 177 ILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQGNTEALPPRNVTHLKTDPQL 236

Query: 731 -LEWDR 745
            LEWD+
Sbjct: 237 ELEWDK 242


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  228 bits (582), Expect = 2e-57
 Identities = 122/238 (51%), Positives = 161/238 (67%), Gaps = 7/238 (2%)
 Frame = +2

Query: 53  MMKLSRFLISRRISVSENLSPSKIDDVKCALW----KSQSGIST---YAPNPGNGSGILY 211
           MMKL + L SR   +SENL   K  D++   W     S+  +ST   +  + GN    +Y
Sbjct: 1   MMKLKQLLQSRT-HLSENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVY 59

Query: 212 ADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFAL 391
           A Y ++KGKA+L++ P+LP F++  SG L+VD+ G ++L+FSPA+GERKYD+EKKQ FAL
Sbjct: 60  APYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFAL 119

Query: 392 SATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSEDGYFFTLTVANSLLKT 571
           SA E+GSL+SL+P   CEFFHDPSMK+SNAGQVRKSLSV  +    YF +L+V N++ KT
Sbjct: 120 SAVEVGSLLSLSPGGGCEFFHDPSMKTSNAGQVRKSLSVKSMDGGSYFLSLSVVNNIQKT 179

Query: 572 NERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLSPNLEWDR 745
           NER  VP+T AEF VMQT+ SF LPHI+GW ++  Q     +A  S       LEWDR
Sbjct: 180 NERLAVPLTAAEFAVMQTACSFALPHILGWDRYMNQKLPRTEATPS------TLEWDR 231


>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
          Length = 237

 Score =  227 bits (579), Expect = 5e-57
 Identities = 129/244 (52%), Positives = 165/244 (67%), Gaps = 14/244 (5%)
 Frame = +2

Query: 56  MKLSRFLISRRISVSENLSPSKIDDVKCALWKSQSGISTYAPNPGNG---------SGIL 208
           MK +R L+SR +    + S S  +      + S S  ST    PG G         SG L
Sbjct: 1   MKQARSLLSRSLC---DQSKSLFEASTLRGFASWSNSST----PGRGFPGKDAAKPSGRL 53

Query: 209 YADYTIFKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFA 388
           +A Y+IFKGKAALS+ P+LP+FT+  SG LR+D++GS+++ F PAIGERKYD+EKKQ FA
Sbjct: 54  FAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFA 113

Query: 389 LSATELGSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSE-DGYFFTLTVANSLL 565
           LS TE+GSLIS+    S EFFHDPSMKSSNAGQVRKSLSV P ++  GYF +L+V NS+L
Sbjct: 114 LSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSIL 173

Query: 566 KTNERFTVPVTKAEFTVMQTSFSFMLPHIMGWHQF----STQSPGSNQARQSEVNLSPNL 733
           KTN+ F VPVTKAEF VM+T+FSF LPHIMGW++     +T++  S      +      L
Sbjct: 174 KTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLEL 233

Query: 734 EWDR 745
           EWD+
Sbjct: 234 EWDK 237


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
           gi|355501485|gb|AES82688.1| hypothetical protein
           MTR_7g116270 [Medicago truncatula]
           gi|388497124|gb|AFK36628.1| unknown [Medicago
           truncatula]
          Length = 226

 Score =  227 bits (579), Expect = 5e-57
 Identities = 125/234 (53%), Positives = 163/234 (69%), Gaps = 1/234 (0%)
 Frame = +2

Query: 47  PKMMKLSRFLISRRISVSENLSPSKIDDVKCALWKSQSGISTYAPNPGNGSGILYADYTI 226
           PKM+K SR L S         S + + +V  A   S +  + Y+   G  S  ++A Y++
Sbjct: 3   PKMLKFSRMLHSS--------SRNHLLEVLYARDFSTATNNNYSAK-GYTSDRIFAPYSV 53

Query: 227 FKGKAALSISPILPTFTKTQSGALRVDKKGSILLKFSPAIGERKYDYEKKQCFALSATEL 406
           +KGKAA S+SP LPTFTK  SGAL VD+ GSI++ F PAIGERKYD+EK+Q FALSATE+
Sbjct: 54  YKGKAAFSLSPCLPTFTKLDSGALVVDRHGSIMMSFMPAIGERKYDWEKRQIFALSATEV 113

Query: 407 GSLISLAPAKSCEFFHDPSMKSSNAGQVRKSLSVTPLSEDGYFFTLTVANSLLKTNERFT 586
           GSLI++ P  SCEFFHDPSMKSSNAGQVRKSLS+ P S +GYF +L+V NS+L T + F+
Sbjct: 114 GSLIAIGPQDSCEFFHDPSMKSSNAGQVRKSLSIKPHS-NGYFVSLSVVNSVLNTKDNFS 172

Query: 587 VPVTKAEFTVMQTSFSFMLPHIMGWHQFSTQSPGSNQARQSEVNLS-PNLEWDR 745
           VPVT AEF VM+T+ SF LPHIMGW + + Q      + Q ++N    +LEW++
Sbjct: 173 VPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSGTVSFQPKMNSQILDLEWEK 226