BLASTX nr result
ID: Cocculus22_contig00018032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00018032
(408 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc... 73 5e-11
ref|XP_007208870.1| hypothetical protein PRUPE_ppa026000mg, part... 72 1e-10
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 71 2e-10
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 70 3e-10
ref|XP_007158129.1| hypothetical protein PHAVU_002G126800g [Phas... 67 2e-09
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra... 67 3e-09
gb|EYU37468.1| hypothetical protein MIMGU_mgv1a001824mg [Mimulus... 66 4e-09
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 66 4e-09
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-08
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 64 3e-08
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra... 63 5e-08
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra... 62 8e-08
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A... 62 8e-08
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra... 62 8e-08
ref|XP_007040939.1| RECQ helicase L2 isoform 1 [Theobroma cacao]... 61 1e-07
ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
gb|EXC23823.1| ATP-dependent DNA helicase Q-like 2 [Morus notabi... 60 3e-07
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote... 59 7e-07
ref|XP_006415334.1| hypothetical protein EUTSA_v10006954mg [Eutr... 57 3e-06
>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| DNA helicase family protein
[Populus trichocarpa]
Length = 718
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1
Query: 19 LEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRNL 183
LEK+IGKLKTEKYGS+IL++I+ Y S PDN + NE + S NRA+KRLKTK+ +
Sbjct: 654 LEKIIGKLKTEKYGSKILDEIKKYTGSEPPDNGMLNEEEGSGNRASKRLKTKKGI 708
>ref|XP_007208870.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
gi|462404605|gb|EMJ10069.1| hypothetical protein
PRUPE_ppa026000mg, partial [Prunus persica]
Length = 308
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+E LE +IGKLK EKYGSRILEQ+ +YA S QP++ + E + ENRA+KRLK+K++
Sbjct: 240 PNSMELLENIIGKLKAEKYGSRILEQVNTYANSTQPED--AKEDQDIENRASKRLKSKKH 297
Query: 181 L 183
L
Sbjct: 298 L 298
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNL-SNEVDESENRATKRLKTKR 177
PTSI +LE MIGKLKTEKYGS+ILE+I Y + QP+N L ++E SENRA KRLK+ +
Sbjct: 640 PTSILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRLKSNK 699
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/61 (55%), Positives = 49/61 (80%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S E+LEK+IGKLKTE+YG+RILE+I+ +A S + DN + N+ + S+ R +KRLKTK++
Sbjct: 646 PNSTEELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILND-EGSKRRPSKRLKTKKD 704
Query: 181 L 183
L
Sbjct: 705 L 705
>ref|XP_007158129.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
gi|561031544|gb|ESW30123.1| hypothetical protein
PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGKLKTEKYG+RIL+QI+ Y+ S D E++ RA KR KTK+N
Sbjct: 637 PNSLEQLEKVIGKLKTEKYGNRILQQIEKYSDSELTDK------QETDGRAAKRSKTKKN 690
Query: 181 L 183
L
Sbjct: 691 L 691
>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Fragaria vesca subsp. vesca]
Length = 708
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGK+KTEKYGSRILEQ+ YA + QP + E E+E R++KRLK
Sbjct: 641 PNSMEQLEKIIGKVKTEKYGSRILEQVSMYADAKQPVED--KEEQETERRSSKRLKNTEP 698
Query: 181 L 183
L
Sbjct: 699 L 699
>gb|EYU37468.1| hypothetical protein MIMGU_mgv1a001824mg [Mimulus guttatus]
Length = 754
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSN-EVDESENRATKRLKTKR 177
P S+E+LEK+IGKLK +KYG++ILE I Y + Q D++ S+ DESE RA K+LKTKR
Sbjct: 683 PKSMEELEKVIGKLKADKYGAKILESIIEYESKNQTDDDFSDGGKDESEGRAIKKLKTKR 742
Query: 178 NL 183
L
Sbjct: 743 AL 744
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKR 177
PTSI + + MIGKLKTEKYGS+ILE+I Y + QP+N ++ SENRA KRLK+ +
Sbjct: 640 PTSILEAKTMIGKLKTEKYGSKILEEIAKYTETEQPENVPPDDRQGSENRAPKRLKSNK 698
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P SIE+LEK+IGKLKTEKYG RILE+I SY + P N ++ E++ K+LKTK+
Sbjct: 640 PKSIEELEKIIGKLKTEKYGGRILEEIASYES--DPQKNNADGSKETKGNTVKKLKTKKT 697
Query: 181 L 183
L
Sbjct: 698 L 698
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGKLKTEKYG++ILEQI Y+ D + S+ RA KR KTK+N
Sbjct: 639 PNSLEQLEKVIGKLKTEKYGNKILEQIVKYSDFKPTDEQV------SDGRAAKRSKTKKN 692
Query: 181 L 183
L
Sbjct: 693 L 693
>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum tuberosum]
Length = 706
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P SIE+LEK+IGKLKTEKYG RILE+I SY + Q D + S E++ K+LKTK+
Sbjct: 639 PKSIEELEKIIGKLKTEKYGDRILEEIVSYESDPQKDADGSK---ETKGNTVKKLKTKKA 695
Query: 181 L 183
L
Sbjct: 696 L 696
>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Glycine max]
Length = 690
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGKL+TEKYG+RIL+QI+ Y D E + RA KRLK+K+N
Sbjct: 632 PNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDK------QEIDARAAKRLKSKKN 685
Query: 181 L 183
L
Sbjct: 686 L 686
>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
gi|548857895|gb|ERN15693.1| hypothetical protein
AMTR_s00048p00224070 [Amborella trichopoda]
Length = 713
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGK KTEKYG RIL+ I+ Y + P+ ++ E D ++R TKR KTK+
Sbjct: 643 PDSLEQLEKLIGKTKTEKYGERILDCIRQYVETEVPNGSV-KEGDSIQHRPTKRAKTKKA 701
Query: 181 L 183
L
Sbjct: 702 L 702
>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Glycine max]
Length = 695
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+EQLEK+IGKL+TEKYG+RIL+QI+ Y D E + RA KRLK+K+N
Sbjct: 637 PNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDK------QEIDARAAKRLKSKKN 690
Query: 181 L 183
L
Sbjct: 691 L 691
>ref|XP_007040939.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
gi|508778184|gb|EOY25440.1| RECQ helicase L2 isoform 1
[Theobroma cacao]
Length = 709
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P+S E+LE +IGKLKTEKYG RIL +++ Y + Q ++N+ E +E R K+LKTK
Sbjct: 639 PSSTEELEMIIGKLKTEKYGDRILGEVKKYGIAEQLNDNVLEEEQGTEKRPRKKLKTKEE 698
Query: 181 L 183
+
Sbjct: 699 V 699
>ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 237
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKT 171
PTS++QLE MIGK+K EKYG RILE+I+ ++ P N E +E ENR KR KT
Sbjct: 168 PTSLDQLETMIGKVKAEKYGDRILEEIEKWSIGQNP-NASEEEQEEDENRTPKRPKT 223
>ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKT 171
PTS++QLE MIGK+K EKYG RILE+I+ ++ P N E +E ENR KR KT
Sbjct: 669 PTSLDQLETMIGKVKAEKYGDRILEEIEKWSIGQNP-NASEEEQEEDENRTPKRPKT 724
>gb|EXC23823.1| ATP-dependent DNA helicase Q-like 2 [Morus notabilis]
Length = 423
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +1
Query: 13 EQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDE--SENRATKRLKTKRNL 183
+ LEK+IGKLKTEKYGS+ILEQI+ YA NE+ E SE RATKRLKTK+ L
Sbjct: 364 KSLEKIIGKLKTEKYGSKILEQIRKYAD--------LNELKEQGSEERATKRLKTKKAL 414
>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula] gi|355513912|gb|AES95535.1| ATP-dependent
DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+E+LEK IGKLKTEKYG++IL QI Y+ D L++E ++ RA KR KTK+N
Sbjct: 621 PNSLEELEKAIGKLKTEKYGNKILAQIVKYS-----DFELTDE-QVNDGRAAKRSKTKKN 674
Query: 181 L 183
L
Sbjct: 675 L 675
>ref|XP_006415334.1| hypothetical protein EUTSA_v10006954mg [Eutrema salsugineum]
gi|557093105|gb|ESQ33687.1| hypothetical protein
EUTSA_v10006954mg [Eutrema salsugineum]
Length = 706
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +1
Query: 1 PTSIEQLEKMIGKLKTEKYGSRILEQIQSYAASVQPDNNLSNEVDESENRATKRLKTKRN 180
P S+++LE +IGKLKTEKYG RILE ++ A S Q + +NE + ++R++KR KT++N
Sbjct: 634 PDSLQELESIIGKLKTEKYGDRILEVMRQDAVSEQLGEDPTNE-ETCKSRSSKRAKTQKN 692
Query: 181 L 183
+
Sbjct: 693 V 693