BLASTX nr result

ID: Cocculus22_contig00017944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00017944
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   7e-09
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    59   7e-07
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   7e-07
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    59   9e-07
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    58   2e-06
ref|XP_007021221.1| Uncharacterized protein TCM_031281 [Theobrom...    56   6e-06
ref|XP_002462987.1| hypothetical protein SORBIDRAFT_02g035825 [S...    55   8e-06

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -1

Query: 420 PLGAAAYQISG--LTSSRLSYDCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSSH 247
           P+G+  ++  G  L S +L++  C+ LIDKI +R QGW +  LS AGR +L+ ++L S  
Sbjct: 751 PIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQ 810

Query: 246 LYWSGVFRLPSKIL 205
            YW  +F LP K++
Sbjct: 811 NYWGQIFPLPKKLI 824


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = -1

Query: 426 GYPLGAAAYQISGLTS--SRLSYDCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQS 253
           G+ +G    +  GL     RL    C  LI +I SR++ W +R LS AGR +L+ S+L+S
Sbjct: 28  GFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRS 87

Query: 252 SHLYWSGVFRLPSKI 208
             +YW+ VF LP K+
Sbjct: 88  LQVYWASVFMLPMKV 102


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = -1

Query: 417 LGAAAYQISG--LTSSRLSYDCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSSHL 244
           LG   ++  G  LTS +L+Y  C+ L++ I +R Q W ++ LS AGR +LI S+L S   
Sbjct: 749 LGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQN 808

Query: 243 YWSGVFRLPSKIL 205
           YW+ +F L  K++
Sbjct: 809 YWAHIFPLSKKVI 821


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = -1

Query: 423 YPLGAAAYQISG--LTSSRLSYDCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSS 250
           + LG    +  G  L +S+L    C  L+D+I++R++ W+++ LS AGR +LI S+L S 
Sbjct: 584 FSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSI 643

Query: 249 HLYWSGVFRLPSKIL 205
            +YW+    LP K+L
Sbjct: 644 QVYWASHLILPKKVL 658


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -1

Query: 387  LTSSRLSYDCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSSHLYWSGVFRLP 217
            L + R++   C  L++KI+SR+  WK+RFLS AGR +L++S++ S   +W   FRLP
Sbjct: 1031 LMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLP 1087


>ref|XP_007021221.1| Uncharacterized protein TCM_031281 [Theobroma cacao]
           gi|508720849|gb|EOY12746.1| Uncharacterized protein
           TCM_031281 [Theobroma cacao]
          Length = 1408

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -1

Query: 348 LIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSSHLYWSGVFRLPSKI 208
           +IDK  SRL GWK +FLSM GR  LI+S+L S  L++  +FRLP+ +
Sbjct: 826 IIDKFNSRLAGWKGQFLSMGGRLTLINSVLSSLPLFYLSIFRLPTMV 872


>ref|XP_002462987.1| hypothetical protein SORBIDRAFT_02g035825 [Sorghum bicolor]
           gi|241926364|gb|EER99508.1| hypothetical protein
           SORBIDRAFT_02g035825 [Sorghum bicolor]
          Length = 114

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -1

Query: 363 DCCRSLIDKIQSRLQGWKSRFLSMAGRAELIHSMLQSSHLYWSGVFRLPSKI 208
           DC R L+D++ SR+ GWK + LSM G+  LI S+ Q+  +Y   VF++P+KI
Sbjct: 8   DCFRHLVDRVNSRINGWKEKLLSMGGKEILIKSIAQAIPVYAMMVFKIPNKI 59


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