BLASTX nr result

ID: Cocculus22_contig00017885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00017885
         (416 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   142   4e-32
ref|XP_007036080.1| Pentatricopeptide repeat superfamily protein...   142   5e-32
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   142   6e-32
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31
ref|XP_007211076.1| hypothetical protein PRUPE_ppa017205mg, part...   139   5e-31
gb|EYU32989.1| hypothetical protein MIMGU_mgv1a018420mg [Mimulus...   138   9e-31
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   135   8e-30
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   132   5e-29
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   129   6e-28
ref|XP_007132384.1| hypothetical protein PHAVU_011G090300g [Phas...   125   5e-27
ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [S...   116   4e-24
ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]        115   8e-24

>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  142 bits (359), Expect = 4e-32
 Identities = 69/83 (83%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYN+LIS+MFVRKK+DDLLVAGKLLIEMVDRGF+PR+F FNRVLNGLLL GN
Sbjct: 411 GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLMGN 470

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
              AK+ILRLQS+C RLPRQFKL
Sbjct: 471 QGLAKEILRLQSRCGRLPRQFKL 493


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  142 bits (359), Expect = 4e-32
 Identities = 69/83 (83%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYN+LIS+MFVRKK+DDLLVAGKLLIEMVDRGF+PR+F FNRVLNGLLL GN
Sbjct: 411 GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGN 470

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
              AK+ILRLQS+C RLPRQFKL
Sbjct: 471 QGLAKEILRLQSRCGRLPRQFKL 493


>ref|XP_007036080.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|590662984|ref|XP_007036083.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508773325|gb|EOY20581.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508773328|gb|EOY20584.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao]
          Length = 491

 Score =  142 bits (358), Expect = 5e-32
 Identities = 69/83 (83%), Positives = 75/83 (90%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G+CLPNLDTYN+LI AMFVRKK DDL+VAGKLLIEMVDRGF+PRR  FNRVL+GLLLTGN
Sbjct: 409 GDCLPNLDTYNILIGAMFVRKKPDDLVVAGKLLIEMVDRGFMPRRLTFNRVLDGLLLTGN 468

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK ILRLQS+C RLPRQFKL
Sbjct: 469 QGFAKGILRLQSRCGRLPRQFKL 491


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/83 (81%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G+CLPNLDTYN+LISAMFVRKK+DDLLVAG LLIEMVDRGF+PR+F FNRVLNGLLLTGN
Sbjct: 409 GDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGN 468

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+ILRLQS+C RL R+ KL
Sbjct: 469 QGFAKEILRLQSRCGRLTRKIKL 491


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  141 bits (355), Expect = 1e-31
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = -1

Query: 407 LPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNHWF 228
           LPNLDTYNVLISAMFVRKK++DL+VAGKLL+EMVDRGFIPR+F FNRVLNGLLLTGN  F
Sbjct: 423 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAF 482

Query: 227 AKDILRLQSQCSRLPRQFKL 168
           AK+ILRLQS+C RLPRQFKL
Sbjct: 483 AKEILRLQSKCGRLPRQFKL 502


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  139 bits (350), Expect = 4e-31
 Identities = 67/83 (80%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           GECLPNLDTYNVLISAMFVRKK +DLLVAGKLLIEMVDRGF+PR++ FN+VL+GLLLTGN
Sbjct: 407 GECLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVDRGFLPRKYTFNKVLDGLLLTGN 466

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+ILR QS+C RLPRQ +L
Sbjct: 467 QGFAKEILRSQSRCGRLPRQVRL 489


>ref|XP_007211076.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
           gi|462406811|gb|EMJ12275.1| hypothetical protein
           PRUPE_ppa017205mg, partial [Prunus persica]
          Length = 403

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/83 (81%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYNVLISAMFVRKK +DLLVAGKLLIEMV+RGF+PRRF FNR+L+GLLLTGN
Sbjct: 321 GICLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVNRGFLPRRFTFNRILDGLLLTGN 380

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FA++ILRLQS+C RLPRQ KL
Sbjct: 381 QAFAQEILRLQSRCGRLPRQVKL 403


>gb|EYU32989.1| hypothetical protein MIMGU_mgv1a018420mg [Mimulus guttatus]
          Length = 488

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/81 (79%), Positives = 73/81 (90%)
 Frame = -1

Query: 410 CLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNHW 231
           CLPNLDTYN+LI AMFVRK ADDLL AGKLL+EMVDRGF+PR+F FNRVLNGL+LTGN  
Sbjct: 408 CLPNLDTYNILIGAMFVRKNADDLLTAGKLLVEMVDRGFLPRKFTFNRVLNGLMLTGNQG 467

Query: 230 FAKDILRLQSQCSRLPRQFKL 168
           FAK+ILR+QS+C RLPR F+L
Sbjct: 468 FAKEILRVQSKCGRLPRNFRL 488


>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G+CLPNLDTYN+LISAMFVRKK+DDLLVAGKLL EMVDRGF+PR+F FNRVLNGLLLTGN
Sbjct: 404 GDCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGN 463

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+ILRL S+  RLP  FKL
Sbjct: 464 QDFAKEILRLVSKSGRLPCHFKL 486


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  135 bits (340), Expect = 6e-30
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYN+LISAMFVRKK+DDLLVAGKLL EMVDRGF+PR+F FNRVLNGLLLTGN
Sbjct: 410 GHCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGN 469

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+ILRL S+  RLP  FKL
Sbjct: 470 QDFAKEILRLVSKSGRLPCHFKL 492


>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  135 bits (339), Expect = 8e-30
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = -1

Query: 413 ECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNH 234
           +CLPNLDTYN+LISAMFVRKK+D LL AGKLLIEMV+RGF+PR+F FNRVL+GLLLTGN 
Sbjct: 369 DCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQ 428

Query: 233 WFAKDILRLQSQCSRLPRQFKL 168
            FAK+ILRLQS+C RLPR+ KL
Sbjct: 429 DFAKEILRLQSRCGRLPRRLKL 450


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  133 bits (335), Expect = 2e-29
 Identities = 62/83 (74%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYNVLISAMFVRKK++DL+VAGKLL++MVDRGF+PR+F FNRVLNGL++TGN
Sbjct: 413 GSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGN 472

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+ILR+QS+C R+ R+ KL
Sbjct: 473 QDFAKEILRMQSRCGRIVRRLKL 495


>ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X1 [Glycine max]
           gi|571489017|ref|XP_006591093.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X2 [Glycine max]
          Length = 492

 Score =  133 bits (334), Expect = 3e-29
 Identities = 63/83 (75%), Positives = 76/83 (91%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYNVLISAMFVRKK++DL+VAGKLL+EMV+RGF+PR+F FNRVLNGL++TGN
Sbjct: 410 GLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGN 469

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAKDILR+QS+C R+ R+ KL
Sbjct: 470 QDFAKDILRMQSRCGRVVRRLKL 492


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  132 bits (332), Expect = 5e-29
 Identities = 62/83 (74%), Positives = 74/83 (89%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G+CLPNLDTYN+LI++MFVRK +D+LLVAGKLL+EMVDRGF+PR+  FNRVL+GLLLTGN
Sbjct: 400 GDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGN 459

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FAK+IL LQ  C RLPR+FKL
Sbjct: 460 QDFAKEILSLQGGCGRLPRKFKL 482


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  130 bits (326), Expect = 2e-28
 Identities = 62/83 (74%), Positives = 73/83 (87%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G CLPNLDTYN+LISAMFVRKK++DL+VAGKLLIEMV RGF+PR+F FNRVLNGL+LTGN
Sbjct: 416 GTCLPNLDTYNILISAMFVRKKSEDLVVAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGN 475

Query: 236 HWFAKDILRLQSQCSRLPRQFKL 168
             FA +ILR+QS+C R+ R  KL
Sbjct: 476 RDFANEILRMQSRCGRILRHVKL 498


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/84 (75%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
 Frame = -1

Query: 416 GECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGN 237
           G+CLPNLDTYN+LIS MFVRK+++D++VAGKLL+EMV+RGFIPR+F FNRVLNGLLLTGN
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGN 458

Query: 236 HWFAKDILRLQSQC-SRLPRQFKL 168
             FAK+ILRLQS+  SRL R+F+L
Sbjct: 459 QAFAKEILRLQSKSGSRLLRKFRL 482


>ref|XP_007132384.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
           gi|561005384|gb|ESW04378.1| hypothetical protein
           PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  125 bits (315), Expect = 5e-27
 Identities = 59/81 (72%), Positives = 72/81 (88%)
 Frame = -1

Query: 410 CLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNHW 231
           CLPNLDTYNV+ISAMF+RKK++DL+VAGKLL+EMVDRGF+PR+F FNRVLNGL +TGN  
Sbjct: 411 CLPNLDTYNVVISAMFLRKKSEDLVVAGKLLMEMVDRGFLPRKFTFNRVLNGLAITGNQD 470

Query: 230 FAKDILRLQSQCSRLPRQFKL 168
           FAK+ILR Q +C R+ R+ KL
Sbjct: 471 FAKEILRKQGRCGRVVRRLKL 491


>ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
           gi|241932588|gb|EES05733.1| hypothetical protein
           SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  116 bits (290), Expect = 4e-24
 Identities = 50/82 (60%), Positives = 72/82 (87%)
 Frame = -1

Query: 413 ECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNH 234
           ECLPN DTYN++ISAMFVRK+A+D+ VA ++++EMVDRG++PRRF+FNRVLNGL+LTGN 
Sbjct: 421 ECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQ 480

Query: 233 WFAKDILRLQSQCSRLPRQFKL 168
             ++++LR+Q + +RL R+ +L
Sbjct: 481 ELSRELLRMQEKYTRLRREIRL 502


>ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Setaria italica]
          Length = 505

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/82 (59%), Positives = 72/82 (87%)
 Frame = -1

Query: 413 ECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNH 234
           ECLPN DTYN++ISAMFVRK+A+D+ VA +++++MVDRG++PRRF+FNRVLNGL+LTGN 
Sbjct: 424 ECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVDMVDRGYLPRRFMFNRVLNGLMLTGNQ 483

Query: 233 WFAKDILRLQSQCSRLPRQFKL 168
             ++++LR+Q + +RL R+ +L
Sbjct: 484 ELSRELLRMQEKYARLRREIRL 505


>gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
          Length = 501

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/82 (59%), Positives = 72/82 (87%)
 Frame = -1

Query: 413 ECLPNLDTYNVLISAMFVRKKADDLLVAGKLLIEMVDRGFIPRRFIFNRVLNGLLLTGNH 234
           ECLPN DTYN++ISAMFVRK+A+D+ VA ++++EMVDRG++PR+F+FNRVLNGL+LTGN 
Sbjct: 420 ECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQ 479

Query: 233 WFAKDILRLQSQCSRLPRQFKL 168
             ++++LR+Q + +RL R+ +L
Sbjct: 480 ELSRELLRMQEKYTRLRREIRL 501


Top