BLASTX nr result

ID: Cocculus22_contig00017642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00017642
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88747.1| 60S ribosomal protein L36 homolog [Allium cepa]        57   3e-06
ref|XP_006445050.1| hypothetical protein CICLE_v10022961mg [Citr...    55   8e-06
gb|AEY84977.1| 60S ribosomal protein L36 [Wolffia australiana]         55   8e-06
ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like ...    55   8e-06
ref|XP_007206165.1| hypothetical protein PRUPE_ppa013654mg [Prun...    55   1e-05

>dbj|BAB88747.1| 60S ribosomal protein L36 homolog [Allium cepa]
          Length = 64

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   THKRAKKKREEMSNALRKMRSAGVSEKKK 87
           THKRAK+KREEMSN LRKMRSAGVSEKKK
Sbjct: 36  THKRAKRKREEMSNVLRKMRSAGVSEKKK 64


>ref|XP_006445050.1| hypothetical protein CICLE_v10022961mg [Citrus clementina]
           gi|567905126|ref|XP_006445051.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|567905128|ref|XP_006445052.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|567905130|ref|XP_006445053.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|567905132|ref|XP_006445054.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|568876030|ref|XP_006491089.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform X1 [Citrus
           sinensis] gi|568876032|ref|XP_006491090.1| PREDICTED:
           60S ribosomal protein L36-3-like isoform X2 [Citrus
           sinensis] gi|557547312|gb|ESR58290.1| hypothetical
           protein CICLE_v10022961mg [Citrus clementina]
           gi|557547313|gb|ESR58291.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|557547314|gb|ESR58292.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|557547315|gb|ESR58293.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
           gi|557547316|gb|ESR58294.1| hypothetical protein
           CICLE_v10022961mg [Citrus clementina]
          Length = 110

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   THKRAKKKREEMSNALRKMRSAGVSEKKK 87
           THKRAKKKREEMSNALRKMRSAG +EKKK
Sbjct: 82  THKRAKKKREEMSNALRKMRSAGGAEKKK 110


>gb|AEY84977.1| 60S ribosomal protein L36 [Wolffia australiana]
          Length = 110

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   THKRAKKKREEMSNALRKMRSAGVSEKKK 87
           THKRAKKKREEM+N LRKMR+AGVSEKKK
Sbjct: 82  THKRAKKKREEMANVLRKMRAAGVSEKKK 110


>ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like [Brachypodium
           distachyon]
          Length = 110

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   THKRAKKKREEMSNALRKMRSAGVSEKKK 87
           THKRAKKKREEMSN LRKMRSAGV++KKK
Sbjct: 82  THKRAKKKREEMSNVLRKMRSAGVADKKK 110


>ref|XP_007206165.1| hypothetical protein PRUPE_ppa013654mg [Prunus persica]
           gi|462401807|gb|EMJ07364.1| hypothetical protein
           PRUPE_ppa013654mg [Prunus persica]
          Length = 110

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   THKRAKKKREEMSNALRKMRSAGVSEKKK 87
           THKRAKKKREEMSN LRKMRS GV+EKKK
Sbjct: 82  THKRAKKKREEMSNVLRKMRSGGVTEKKK 110


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