BLASTX nr result
ID: Cocculus22_contig00016888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00016888
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI14793.3| unnamed protein product [Vitis vinifera] 95 9e-18
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 88 1e-15
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu... 83 5e-14
ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Popu... 83 5e-14
ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Popu... 81 2e-13
ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prun... 80 2e-13
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 78 1e-12
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 78 1e-12
ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II tra... 76 4e-12
gb|EYU27923.1| hypothetical protein MIMGU_mgv1a000311mg [Mimulus... 74 2e-11
ref|XP_003541539.1| PREDICTED: mediator of RNA polymerase II tra... 74 2e-11
ref|XP_007159313.1| hypothetical protein PHAVU_002G227600g [Phas... 73 4e-11
ref|XP_006396653.1| hypothetical protein EUTSA_v10028367mg [Eutr... 73 5e-11
gb|EXB82793.1| hypothetical protein L484_012106 [Morus notabilis] 72 6e-11
ref|XP_007025672.1| Sensitive to freezing 6 [Theobroma cacao] gi... 72 8e-11
ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago ... 71 1e-10
gb|AAM93675.1| putative glycine-rich protein [Oryza sativa Japon... 70 2e-10
gb|EEE51218.1| hypothetical protein OsJ_32046 [Oryza sativa Japo... 70 2e-10
ref|NP_001064970.1| Os10g0498700 [Oryza sativa Japonica Group] g... 70 2e-10
gb|AAL58272.2|AC068923_14 hypothetical protein, 3'-partial [Oryz... 70 2e-10
>emb|CBI14793.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 95.1 bits (235), Expect = 9e-18
Identities = 57/98 (58%), Positives = 63/98 (64%), Gaps = 11/98 (11%)
Frame = +1
Query: 40 MTPSSGVKDSEDEAVSGAIEVS-GATNSRASERSDEEG--------VVEKI--DQMEESD 186
M+P SG KDSEDE V A+EV+ G S +EEG VVEK D MEE D
Sbjct: 1 MSPGSGAKDSEDEPVPQALEVAKGLEKSEVVSVDEEEGEQEEEGEQVVEKTADDPMEE-D 59
Query: 187 QSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
+PATVF IRLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 60 SVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWC 97
>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
gi|223541698|gb|EEF43246.1| conserved hypothetical
protein [Ricinus communis]
Length = 1255
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 49 SSGVKDSEDEAVSGAIEV----SGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSI 216
+ G K+ E+E+V ++E+ +G+ S EE VEK D E D SPATVF I
Sbjct: 16 TGGNKEPEEESVGQSLEIVAKGAGSDKPAGEPVSSEEDSVEKPDDPMEEDSVSPATVFCI 75
Query: 217 RLKQPPSNLRHKMSVPELCRTFSAATWC 300
RLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 76 RLKQPRSNLQHKMSVPELCRNFSAVAWC 103
>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
gi|550340281|gb|EEE86321.2| hypothetical protein
POPTR_0004s04050g [Populus trichocarpa]
Length = 1328
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/94 (47%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Frame = +1
Query: 40 MTPSSGVKDS--EDEAVSGAIEVSGATNS-----RASERSDEEGVVEKIDQMEESDQSSP 198
MT SS +K++ E++ + G S +EE EK+D E D SP
Sbjct: 1 MTSSSSIKETTEEEQVTPDILPADGGVGGVEKIEPVSSGGEEESGGEKLDDSMEEDSVSP 60
Query: 199 ATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
ATVF IRLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 61 ATVFCIRLKQPRSNLQHKMSVPELCRKFSAVAWC 94
>ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Populus trichocarpa]
gi|550340280|gb|EEE85530.2| hypothetical protein
POPTR_0004s04040g [Populus trichocarpa]
Length = 1236
Score = 82.8 bits (203), Expect = 5e-14
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Frame = +1
Query: 40 MTPSSGVKDS-EDEAVSGAIE-----VSGATNSR-ASERSDEEGVVEKIDQMEESDQSSP 198
MT SS +K++ E+E V+ I V+G + S +EE EK+D E D SP
Sbjct: 1 MTSSSSIKETTEEEQVAPDIVPADGGVAGVEKTEPVSSGGEEESGGEKLDDSMEEDSVSP 60
Query: 199 ATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
ATVF IRLKQP SNL+HKMSVPELCR +SA WC
Sbjct: 61 ATVFCIRLKQPRSNLQHKMSVPELCRKYSAVAWC 94
>ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
gi|550327616|gb|ERP55125.1| hypothetical protein
POPTR_0011s04940g [Populus trichocarpa]
Length = 1249
Score = 80.9 bits (198), Expect = 2e-13
Identities = 48/102 (47%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Frame = +1
Query: 40 MTPSSGVKDSEDE---------------AVSGAIEVSGATNSRASERSDEEGVVEKIDQM 174
MT SS K++ +E A SG + + +S E S G EK+D
Sbjct: 1 MTSSSSNKETTEEEQTAPEISPAEGGGGASSGGVGKADPVSSGGEEESGGAG--EKVDDP 58
Query: 175 EESDQSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
E D SPATVF IRLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 59 MEEDSVSPATVFCIRLKQPRSNLQHKMSVPELCRQFSAVAWC 100
>ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prunus persica]
gi|462410415|gb|EMJ15749.1| hypothetical protein
PRUPE_ppa000947mg [Prunus persica]
Length = 953
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/89 (47%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Frame = +1
Query: 58 VKDSEDEAVSGAIE--------VSGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFS 213
+K+S+DE V+ ++E + E +EE V+K E D SPA VF
Sbjct: 3 LKESDDEPVALSLESDKPEIGSIESIEEDEEEEEEEEEEPVDKSGDPMEEDSVSPAAVFC 62
Query: 214 IRLKQPPSNLRHKMSVPELCRTFSAATWC 300
IRLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 63 IRLKQPRSNLQHKMSVPELCRNFSAVAWC 91
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 61 KDSEDEAVSGAIEV---SGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSIRLKQP 231
KDSE++ + +E +++ +S + EE K D + D +PATVF IRLKQP
Sbjct: 22 KDSEEDLAAQPVETVIKPDKSDTLSSAAAAEEEASAKSDDPMDEDSVTPATVFCIRLKQP 81
Query: 232 PSNLRHKMSVPELCRTFSAATWC 300
SNL+HKMSVPELCR FSA WC
Sbjct: 82 RSNLQHKMSVPELCRNFSAVAWC 104
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +1
Query: 61 KDSEDEAVSGAIEV---SGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSIRLKQP 231
KDSE++ + ++ +++ +S ++EE + D M+E D +PATVF IRLKQP
Sbjct: 20 KDSEEDLAAQPVDTVIKPDKSDTLSSAAAEEEASAKSDDPMDE-DSVTPATVFCIRLKQP 78
Query: 232 PSNLRHKMSVPELCRTFSAATWC 300
SNL+HKMSVPELCR FSA WC
Sbjct: 79 RSNLQHKMSVPELCRNFSAVAWC 101
>ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like, partial [Cucumis sativus]
Length = 133
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = +1
Query: 40 MTPSSGVKDSEDEAVSGAIEVSGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSIR 219
MT S + E++ +E+ ++ + EE V+EK D + D +PATVF I+
Sbjct: 1 MTQVSNATEGEEQPQVQPLELPKVSDKTEPLPAQEE-VMEKPDDAMDEDLVTPATVFRIK 59
Query: 220 LKQPPSNLRHKMSVPELCRTFSAATWC 300
LKQP SNL+HKMSVPELCR FSA WC
Sbjct: 60 LKQPRSNLQHKMSVPELCRNFSAVAWC 86
>gb|EYU27923.1| hypothetical protein MIMGU_mgv1a000311mg [Mimulus guttatus]
Length = 1270
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Frame = +1
Query: 46 PSSGVKDSEDEAVSGAIEVSG--ATNSRASERSDEEGVVEK----------IDQMEESDQ 189
P+ K+SE+E+ S S S A+ D+E + EK D + D
Sbjct: 25 PTGAAKESEEESSSPRSSHSPDEKPESAAAVEEDDEVMTEKESAAAGSNIPTDDPMDEDS 84
Query: 190 SSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
+PATVF I+LKQP SNL +KMSVPELCRTFSA WC
Sbjct: 85 GNPATVFCIKLKQPKSNLLYKMSVPELCRTFSAVAWC 121
>ref|XP_003541539.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Glycine max]
gi|571498821|ref|XP_006594323.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X2 [Glycine max]
Length = 1244
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/78 (55%), Positives = 47/78 (60%)
Frame = +1
Query: 67 SEDEAVSGAIEVSGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSIRLKQPPSNLR 246
S D+ S V A S E +EE MEE D +PATVFSIRLKQP SNL
Sbjct: 28 SSDKTDSATAVVVVAAASEEQEVGEEEKPPPPPVPMEE-DPVNPATVFSIRLKQPRSNLL 86
Query: 247 HKMSVPELCRTFSAATWC 300
HKMSVPELCR FSA +WC
Sbjct: 87 HKMSVPELCRNFSAVSWC 104
>ref|XP_007159313.1| hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
gi|561032728|gb|ESW31307.1| hypothetical protein
PHAVU_002G227600g [Phaseolus vulgaris]
Length = 1241
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Frame = +1
Query: 40 MTPSSGVKDSEDEAVSGAI-----------EVSGATNSRASERSDEE-GVVEKIDQMEES 183
M G KD E E V+ ++ + AT A+ ++E G EK MEE
Sbjct: 1 MNQIGGTKDPEAEPVAQSLPQPQDTPKPPDKTDSATVVAATSTEEQEVGPEEKPVPMEE- 59
Query: 184 DQSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
D +PATVFSIRLKQ SNL HKMSVPELCR FSA +WC
Sbjct: 60 DLVNPATVFSIRLKQSRSNLLHKMSVPELCRNFSAVSWC 98
>ref|XP_006396653.1| hypothetical protein EUTSA_v10028367mg [Eutrema salsugineum]
gi|557097670|gb|ESQ38106.1| hypothetical protein
EUTSA_v10028367mg [Eutrema salsugineum]
Length = 1255
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +1
Query: 121 RASERSDEEGVVEKIDQMEESDQSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
++ E+S E +EK D E D SPATVF ++LKQP SNL HKMSVPELCR FSA WC
Sbjct: 52 KSLEKSTEN--IEKEDHQMEVDLVSPATVFCVKLKQPNSNLLHKMSVPELCRNFSAVAWC 109
>gb|EXB82793.1| hypothetical protein L484_012106 [Morus notabilis]
Length = 1003
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 55 GVKDSED-EAVSGAIEVSGATNSRASERSDEEGVVEKIDQMEESDQSSPATVFSIRLKQP 231
G KD+E+ E + ++E S ++ DE+ V E D SPA VF IRLKQP
Sbjct: 8 GSKDAEEAEPAAQSLEDSDKADA------DEDAVETPAGDPMEEDSVSPAAVFCIRLKQP 61
Query: 232 PSNLRHKMSVPELCRTFSAATWC 300
SNL HKMSVPELCR FSA WC
Sbjct: 62 RSNLLHKMSVPELCRNFSAVAWC 84
>ref|XP_007025672.1| Sensitive to freezing 6 [Theobroma cacao]
gi|508781038|gb|EOY28294.1| Sensitive to freezing 6
[Theobroma cacao]
Length = 1249
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/95 (47%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Frame = +1
Query: 49 SSGVKDSEDEAVSGAIEVS----GATNSRASER---SDEEGVVEKIDQME----ESDQSS 195
S KD E+E V+ ++ S G A E + E+ VV ++ E E D +
Sbjct: 7 SGNNKDPEEEPVTQSVVDSTVKTGPDRPVAPEPVAVTGEDEVVTSSEKTEDTPMEDDSVN 66
Query: 196 PATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
PATVF IRLKQP SNL+HKMSVPELCR FSA WC
Sbjct: 67 PATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWC 101
>ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago truncatula]
gi|355503321|gb|AES84524.1| hypothetical protein
MTR_084s0009 [Medicago truncatula]
Length = 1245
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Frame = +1
Query: 115 NSRASERSDEEGVVEK-----IDQMEESDQSSPATVFSIRLKQPPSNLRHKMSVPELCRT 279
N S D+E VV + IDQ E D +PATVF+IRL+Q +NL HKMSVPELCR
Sbjct: 33 NDSVSVVEDQEVVVAEENKSPIDQPMEEDSVNPATVFTIRLRQSKANLMHKMSVPELCRN 92
Query: 280 FSAATWC 300
FSA +WC
Sbjct: 93 FSAVSWC 99
>gb|AAM93675.1| putative glycine-rich protein [Oryza sativa Japonica Group]
Length = 1291
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 187 QSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
Q+SPATVF IRLKQPPS+LRHKM VPELCR FSA WC
Sbjct: 110 QASPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWC 147
>gb|EEE51218.1| hypothetical protein OsJ_32046 [Oryza sativa Japonica Group]
Length = 1290
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 187 QSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
Q+SPATVF IRLKQPPS+LRHKM VPELCR FSA WC
Sbjct: 110 QASPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWC 147
>ref|NP_001064970.1| Os10g0498700 [Oryza sativa Japonica Group]
gi|110289340|gb|AAP54457.2| expressed protein [Oryza
sativa Japonica Group] gi|113639579|dbj|BAF26884.1|
Os10g0498700 [Oryza sativa Japonica Group]
Length = 1301
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 187 QSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
Q+SPATVF IRLKQPPS+LRHKM VPELCR FSA WC
Sbjct: 110 QASPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWC 147
>gb|AAL58272.2|AC068923_14 hypothetical protein, 3'-partial [Oryza sativa Japonica Group]
Length = 812
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 187 QSSPATVFSIRLKQPPSNLRHKMSVPELCRTFSAATWC 300
Q+SPATVF IRLKQPPS+LRHKM VPELCR FSA WC
Sbjct: 38 QASPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWC 75