BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00016873
         (433 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              74   2e-11
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...    74   3e-11
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi...    73   5e-11
emb|CAN69893.1| hypothetical protein VITISV_005621 [Vitis vinifera]    72   6e-11
emb|CAN83959.1| hypothetical protein VITISV_013448 [Vitis vinifera]    72   8e-11
emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera]    72   8e-11
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    72   8e-11
gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]                     72   1e-10
emb|CAN76324.1| hypothetical protein VITISV_011885 [Vitis vinifera]    72   1e-10
emb|CAN68205.1| hypothetical protein VITISV_019387 [Vitis vinifera]    70   2e-10
emb|CAN67947.1| hypothetical protein VITISV_002483 [Vitis vinifera]    70   3e-10
emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera]    70   3e-10
emb|CAN66598.1| hypothetical protein VITISV_039271 [Vitis vinifera]    70   3e-10
emb|CAN64615.1| hypothetical protein VITISV_036196 [Vitis vinifera]    70   3e-10
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...    70   3e-10
emb|CAN80484.1| hypothetical protein VITISV_017184 [Vitis vinifera]    70   4e-10
emb|CAN72485.1| hypothetical protein VITISV_002718 [Vitis vinifera]    70   4e-10
emb|CAN70082.1| hypothetical protein VITISV_008997 [Vitis vinifera]    70   4e-10
emb|CAN64901.1| hypothetical protein VITISV_037598 [Vitis vinifera]    70   4e-10
gb|AAC62796.1| contains similarity to reverse transcriptase (Pfa...    69   5e-10

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/73 (49%), Positives = 48/73 (65%)
 Frame = -3

Query: 221  PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
            P+I++H LN +PT  P+K K R LG ER+ A  ++V KLL    I E+ YP+ L N  +V
Sbjct: 809  PAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVV 868

Query: 41   KKPNCKWRTCVDF 3
            KK N KWR CVD+
Sbjct: 869  KKKNGKWRVCVDY 881


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 224 SPSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTI 45
           S  + SH LN +PT  P+K K R LG +R+ A   +V +LL    IRE+ YP+ L N  +
Sbjct: 602 STEVISHELNVDPTFKPVKQKYRKLGPDRAEAVNAEVVRLLEEGLIREVKYPEWLANPVV 661

Query: 44  VKKPNCKWRTCVDF 3
           VKK N KWR CVDF
Sbjct: 662 VKKKNGKWRVCVDF 675


>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1329

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 224 SPSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTI 45
           S  + SH LN +PT  P+K K R LG +R+ A   +V +LL    IRE+ YP+ L N  +
Sbjct: 416 STEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPEWLANPVV 475

Query: 44  VKKPNCKWRTCVDF 3
           VKK N KWR CVDF
Sbjct: 476 VKKKNGKWRVCVDF 489


>emb|CAN69893.1| hypothetical protein VITISV_005621 [Vitis vinifera]
          Length = 787

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  PT  P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHRLNVLPTARPIRQKVRRFHPDRQKIIRNEIDKLLEAGFIREVDYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN83959.1| hypothetical protein VITISV_013448 [Vitis vinifera]
          Length = 878

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  PT  P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHRLNVFPTARPVRQKIRRFHPDRQKVIRNEIDKLLEAGFIREVDYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera]
          Length = 1027

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  PT  P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHRLNVFPTTRPVRQKIRRFHPDRQKVIRNEIDKLLEAGFIREVDYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269  RPGLLRFCRSIATLPS--PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLIT 96
            R     F  S+  +P    +++ H LN +PT  PLK K R LG +R+    ++V KLL  
Sbjct: 749  RQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDA 808

Query: 95   NFIREIHYPDCLPNVTIVKKPNCKWRTCVDF 3
              I E+ YPD L N  +VKK N KWR C+DF
Sbjct: 809  GSIVEVRYPDWLRNPVVVKKKNGKWRVCIDF 839


>gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]
          Length = 498

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/68 (51%), Positives = 43/68 (63%)
 Frame = -3

Query: 206 HRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIVKKPNC 27
           H LN NP+  P+K K+R LG +R+ A + +V KLL    I E  YPD L N  +VKK N 
Sbjct: 196 HELNVNPSFKPIKQKKRKLGRDRADAVSAEVEKLLKIRSIAEARYPDWLANSVVVKKKNG 255

Query: 26  KWRTCVDF 3
           KWR CVDF
Sbjct: 256 KWRVCVDF 263


>emb|CAN76324.1| hypothetical protein VITISV_011885 [Vitis vinifera]
          Length = 290

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  PT  P++ K R    ++      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHRLNVFPTARPVRQKIRRFHPDKQTVIRNEIDKLLEAGFIREVDYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN68205.1| hypothetical protein VITISV_019387 [Vitis vinifera]
          Length = 832

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+ HRLN  PTV P++ + R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIAFHRLNVLPTVRPIRQRVRRFHPDRQKIIRNEIDKLLEAGFIREVDYPDWLTNVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEDKWRVCVDY 78


>emb|CAN67947.1| hypothetical protein VITISV_002483 [Vitis vinifera]
          Length = 869

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  PT  P++ + R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIASHRLNVLPTTRPVRQRVRRFHLDRQKIIRDEIDKLLEAGFIREVEYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera]
          Length = 880

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SH+LN  PT  P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHKLNVLPTARPIRQKVRRFHPDRQKIIRIEIDKLLEAGFIREVDYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN66598.1| hypothetical protein VITISV_039271 [Vitis vinifera]
          Length = 309

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI SHRLN  PT  P++ + R    +R     +++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIVSHRLNILPTAKPIRQRVRRFHPDRQKIIREEIDKLLEPGFIREVEYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN64615.1| hypothetical protein VITISV_036196 [Vitis vinifera]
          Length = 918

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN  P   P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIASHRLNVFPAARPVRQKIRRFHPDRQEVIRNEIDKLLEARFIREVSYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           P ++ H LN +PT   +K K R LG ERS A   +V KLL    I E+ YP+ L N  +V
Sbjct: 482 PEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWLANPVVV 541

Query: 41  KKPNCKWRTCVDF 3
           KK N KWR C+DF
Sbjct: 542 KKKNDKWRVCIDF 554


>emb|CAN80484.1| hypothetical protein VITISV_017184 [Vitis vinifera]
          Length = 842

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI SHRLN  PT  P++ + R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIISHRLNVLPTARPVRQRVRRFHPDRQKIIRDEIDKLLEAGFIREVEYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN72485.1| hypothetical protein VITISV_002718 [Vitis vinifera]
          Length = 958

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/73 (47%), Positives = 43/73 (58%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN   T  P++ K R    ER      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSIASHRLNVFSTARPVRQKIRRFQPERQKIIRNEIDKLLKAEFIREVSYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN70082.1| hypothetical protein VITISV_008997 [Vitis vinifera]
          Length = 938

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SH+LN  PT  P++ K R    +R      ++ KLL   FIRE+ YPD L NV +V
Sbjct: 6   PSITSHKLNVLPTARPIRQKVRRFHPDRQKIIRIEIDKLLEAGFIREVTYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>emb|CAN64901.1| hypothetical protein VITISV_037598 [Vitis vinifera]
          Length = 369

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNFIREIHYPDCLPNVTIV 42
           PSI+SHRLN   T  P++ + R    +R      ++ KLL T FIRE+ YPD L NV +V
Sbjct: 6   PSIASHRLNVFSTARPVRQRIRRFHPDRQRVIRNEIDKLLETGFIREVSYPDWLANVVVV 65

Query: 41  KKPNCKWRTCVDF 3
            K   KWR CVD+
Sbjct: 66  PKKEGKWRVCVDY 78


>gb|AAC62796.1| contains similarity to reverse transcriptase (Pfam: PF00078 rvt,
           E=4.3e-08) [Arabidopsis thaliana]
           gi|7267135|emb|CAB80803.1| AT4g03800 [Arabidopsis
           thaliana]
          Length = 637

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 GLLRFCRSIATLPS--PSISSHRLNTNPTVTPLK*KERSLGEERSIASAKKVFKLLITNF 90
           G L   R+ A +P   PSI  H LN +P   PLK K R LG ER+ A   K+ KLL    
Sbjct: 310 GDLEGSRTSAYMPDIDPSIICHELNVDPRFKPLKQKRRKLGVERAKAVNGKIDKLLKIGS 369

Query: 89  IREIHYPDCLPNVTIVKKPNCKWRTCVDF 3
           IRE+ YPD +    +VKK N K R C+DF
Sbjct: 370 IREVQYPDWVAITVVVKKKNGKDRVCIDF 398