BLASTX nr result
ID: Cocculus22_contig00016545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00016545
(1329 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi... 210 1e-51
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera] 205 3e-50
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi... 204 7e-50
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,... 197 9e-48
gb|EXB75244.1| hypothetical protein L484_026026 [Morus notabilis] 193 2e-46
emb|CBI41008.3| unnamed protein product [Vitis vinifera] 193 2e-46
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi... 192 3e-46
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi... 190 1e-45
gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis] 189 2e-45
gb|AAM67043.1| unknown [Arabidopsis thaliana] 189 2e-45
ref|NP_566445.1| pentatricopeptide repeat-containing protein [Ar... 188 4e-45
ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containi... 187 7e-45
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera] 187 7e-45
ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containi... 187 9e-45
ref|XP_006377270.1| hypothetical protein POPTR_0011s03510g [Popu... 186 2e-44
ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containi... 185 3e-44
ref|XP_002304977.1| pentatricopeptide repeat-containing family p... 185 3e-44
ref|XP_006343276.1| PREDICTED: pentatricopeptide repeat-containi... 184 6e-44
ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arab... 182 2e-43
ref|XP_007025894.1| Pentatricopeptide repeat-containing protein,... 182 3e-43
>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 210 bits (534), Expect = 1e-51
Identities = 130/329 (39%), Positives = 185/329 (56%), Gaps = 1/329 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + + + IE+ LEE KY REGFAVRL++ + D +VFD +P
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAF---KVFDEMP 121
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
C R+V SFNALL A + +K+D+++ F +LPS+LS+ P++ SYN++IKGL +MGS+
Sbjct: 122 DQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSM 181
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
DSA+ M DEME KK L+PDL TFN LL+G Y SGR DGE+IW ME++NI PD SYNA
Sbjct: 182 DSAVGMLDEME-KKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
KL G+ E + E + LV + S++AL+KG C DG +D+ Y
Sbjct: 241 KLVGLVSSEKRMLEGIGLV-EEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRE 299
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
T TL+ + G D A E+C + + + D ++Q VD LV
Sbjct: 300 NDCSPDK-------LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLV 352
Query: 949 DNSREEDAKALVERSWSEHRRKNILKMPT 1035
+ +AK LV+ S R+ LK+PT
Sbjct: 353 KGGKVVEAKKLVQLGNSNSYRRYNLKIPT 381
>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 205 bits (522), Expect = 3e-50
Identities = 128/329 (38%), Positives = 183/329 (55%), Gaps = 1/329 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + + + IE+ LEE KY REGFAVRL++ + D +VFD +P
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAF---KVFDEMP 121
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
C R+V SFN LL A + +K+D+++ F +LPS+LS+ P++ SYN++IKGL +MGS+
Sbjct: 122 DQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSM 181
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
DSA+ M DEME KK L+PDL TFN LL+ Y SGR DGE+IW ME++NI PD SYNA
Sbjct: 182 DSAVGMLDEME-KKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
KL G+ E + E + LV + S++AL+KG C DG +D+ Y
Sbjct: 241 KLVGLVSSEKRMLEGIGLV-EEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRE 299
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
T TL+ + G D A E+C + + + D ++Q VD LV
Sbjct: 300 NDCSPDK-------LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLV 352
Query: 949 DNSREEDAKALVERSWSEHRRKNILKMPT 1035
+ +AK LV+ S R+ LK+PT
Sbjct: 353 KGGKVVEAKKLVQLGNSNSYRRYNLKIPT 381
>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 204 bits (519), Expect = 7e-50
Identities = 129/329 (39%), Positives = 184/329 (55%), Gaps = 1/329 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + + + IE+ LEE KY REGFAVRL+ + D +VFD +P
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDHAF---KVFDEMP 121
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
C R+V SFNALL A + +K+D+++ F +LPS+LS+ P++ SYN++I GL +MGS+
Sbjct: 122 DQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGSM 181
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
DSA+ M DEME KK L+PDL TFN LL+G Y SGR DGE+IW ME++NI PD SYNA
Sbjct: 182 DSAVGMLDEME-KKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
KL G+ + E + E + LV + S++AL+KG C DG +D+ Y
Sbjct: 241 KLVGL-VSEKRMLEGIGLV-EEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRE 298
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
T TL+ + G D A E+C + + + D ++Q VD LV
Sbjct: 299 NDCLPDK-------LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLV 351
Query: 949 DNSREEDAKALVERSWSEHRRKNILKMPT 1035
+ +AK LV+ S R+ LK+PT
Sbjct: 352 KGGKVVEAKKLVQLGNSNSYRRYNLKIPT 380
>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 377
Score = 197 bits (501), Expect = 9e-48
Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 3/320 (0%)
Frame = +1
Query: 49 YST--KRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFD 222
YST +R S ++ +E LE + E F +RL++ + +D ++FD
Sbjct: 58 YSTIVRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAH---RLFD 114
Query: 223 LLPKYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREM 402
+P C RTVRSFNALL A + K+D+++ R P +L ITP+V S+N++IKG E+
Sbjct: 115 EMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEI 174
Query: 403 GSLDSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGS 582
G+LDS + + EME K+G++PDL TFN LL+GFY +GR DGE+IW++ME +N+ P+ S
Sbjct: 175 GNLDSGVLVLCEME-KRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRS 233
Query: 583 YNAKLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXX 762
YN++LRG+ +E + EAV+L+ + SY+A++KGLC D N+++V Y
Sbjct: 234 YNSRLRGLE-LENRVMEAVELL-GEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRK 291
Query: 763 XXXXXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVD 939
T+ TLI GDLD A+E+C++ + + + Q VVD
Sbjct: 292 LKENGRMPDR-------VTYMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVD 344
Query: 940 ALVDNSREEDAKALVERSWS 999
LV SR E+AK LVER S
Sbjct: 345 ELVKLSRVEEAKDLVERGKS 364
>gb|EXB75244.1| hypothetical protein L484_026026 [Morus notabilis]
Length = 379
Score = 193 bits (490), Expect = 2e-46
Identities = 125/328 (38%), Positives = 184/328 (56%), Gaps = 1/328 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + + K IE+ LE+ KY +EGFAVRL++ + + Q +VFD +P
Sbjct: 62 TVRRLASAKRFKWIEEILEDQKKYSDFSKEGFAVRLISLYGKSGMFENAQ---KVFDEMP 118
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
C +TV SFNALL A + K+D + +F +LP++L+I P++ SYN +IK E GSL
Sbjct: 119 TRNCKQTVLSFNALLGACVNSRKFDLVDGVFGELPAKLAIEPDLVSYNTVIKAFCEKGSL 178
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
DSA+ + DEME KKGLKPD+ +FN LL+ FY S R +DG+RIW +ME++ + PD SYNA
Sbjct: 179 DSAVSVLDEME-KKGLKPDVISFNTLLNAFYGSDRFADGDRIWDLMEKKFVVPDIRSYNA 237
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
KL G+A GK AV L+ + S++ +++G ++GN+D + Y
Sbjct: 238 KLLGLA-YNGKVNGAVDLI-GEMKAKGIEPDVFSFNLVIEGFIKEGNLDGAKQWYSEMRK 295
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
T E LI GDLD A E+ + + + D ++Q VVD LV
Sbjct: 296 SERVPNK-------TTFEKLIPFLRKQGDLDLAYELSQEVFLRRFVLDVALLQRVVDELV 348
Query: 949 DNSREEDAKALVERSWSEHRRKNILKMP 1032
S+ E+AK LVE + R+ LK+P
Sbjct: 349 KESKVEEAKKLVELGKNNDYRRYRLKLP 376
>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 193 bits (490), Expect = 2e-46
Identities = 118/312 (37%), Positives = 177/312 (56%), Gaps = 2/312 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + + + IE+ LEE KY REGFAVRL++ + D +VFD +P
Sbjct: 73 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAF---KVFDEMP 129
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
C R+V SFNALL A + +K+D++ F++LP L + P+V SYN+++ EMGSL
Sbjct: 130 DQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSL 189
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
DSAL + DEME K GL+PDL TFN LL+ FY +G +DGE+IW +M++ N+ P+ SYNA
Sbjct: 190 DSALSVLDEME-KVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNA 248
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
KLRG+ + E + EAV+L+ + + ++L+KG C GN+++ R Y
Sbjct: 249 KLRGV-ISENRMSEAVELI-DEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIAR 306
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDY--PVWHMEDRRVVQAVVDAL 945
T+ TLI + GD D A E+C + W +E ++Q V++ L
Sbjct: 307 NELPPVR-------ATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEP-ALLQQVLEGL 358
Query: 946 VDNSREEDAKAL 981
V S+ E+A L
Sbjct: 359 VKESKIEEATEL 370
>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 192 bits (488), Expect = 3e-46
Identities = 119/309 (38%), Positives = 172/309 (55%), Gaps = 2/309 (0%)
Frame = +1
Query: 67 SKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKYGCP 246
+K ++ IE LE +Y E FAVRLM D ++FD LPK C
Sbjct: 68 AKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAH---KLFDELPKLNCE 124
Query: 247 RTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDSALE 426
RTV SFNALL A + +K+D++ F++LP L I P+V SYN+++ EMGSLDSAL
Sbjct: 125 RTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSALS 184
Query: 427 MFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKLRGM 606
+ DEME K GL+PDL TFN LL+ FY +G +DGE+IW +M++ N+ P+ SYNAKLRG+
Sbjct: 185 VLDEME-KVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGV 243
Query: 607 AMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXXXXX 786
+ E + EAV+L+ + + ++L+KG C GN+++ R Y
Sbjct: 244 -ISENRMSEAVELI-DEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301
Query: 787 XAPAAYITCETHETLIHGAYDNGDLDAALEICLDY--PVWHMEDRRVVQAVVDALVDNSR 960
T+ TLI + GD + A E+C + W +E ++Q V++ LV S+
Sbjct: 302 VR-------ATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEP-ALLQQVLEGLVKESK 353
Query: 961 EEDAKALVE 987
E+A LVE
Sbjct: 354 IEEATELVE 362
>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 190 bits (482), Expect = 1e-45
Identities = 117/309 (37%), Positives = 172/309 (55%), Gaps = 2/309 (0%)
Frame = +1
Query: 67 SKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKYGCP 246
+K ++ IE LE +Y E FAVRLM + + ++FD LPK C
Sbjct: 68 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAH---KLFDELPKLNCE 124
Query: 247 RTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDSALE 426
RTV SFNALL + +K+D++ F++LP L + P+V SYN+++ EMGSLDSAL
Sbjct: 125 RTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALS 184
Query: 427 MFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKLRGM 606
+ DEME K GL+PDL TFN LL+ FY +G +DGE+IW +M++ N+ P+ SYNAKLRG+
Sbjct: 185 VLDEME-KVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGV 243
Query: 607 AMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXXXXX 786
+ E + EAV+L+ + + ++L+KG C GN+++ R Y
Sbjct: 244 -ISENRMSEAVELI-DEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301
Query: 787 XAPAAYITCETHETLIHGAYDNGDLDAALEICLDY--PVWHMEDRRVVQAVVDALVDNSR 960
T+ TLI + GD D A E+C + W +E ++Q V++ LV S+
Sbjct: 302 VR-------ATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEP-ALLQQVLEGLVKESK 353
Query: 961 EEDAKALVE 987
E+A LVE
Sbjct: 354 IEEATELVE 362
>gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis]
Length = 371
Score = 189 bits (481), Expect = 2e-45
Identities = 121/311 (38%), Positives = 169/311 (54%), Gaps = 3/311 (0%)
Frame = +1
Query: 58 KRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKY 237
+R + + IE LE KY REGF++RL+ D +VFD LP+
Sbjct: 70 RRLAAANKFSMIEDILEHQKKYDDIRREGFSIRLIGLYGEAGMFDHAH---KVFDELPEL 126
Query: 238 GCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDS 417
C RTV+S NALL+A L +K+D++ +F +LPS++SI P++ SYN++I EMGSLD
Sbjct: 127 NCDRTVKSLNALLKAALDAKKFDKVIEIFNELPSRVSIEPDMISYNIVIHAFCEMGSLDE 186
Query: 418 ALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKL 597
AL +F ++E G +PDL TFN LL+ Y + R S+GERIW+ ME +N+ PD SYN++L
Sbjct: 187 ALSLFRKLE-DNGQEPDLVTFNTLLNALYMNNRFSEGERIWATMESKNVVPDVRSYNSRL 245
Query: 598 RGMAMIEGKSCEAVKLVXXXXXXXXXXXNSD--SYHALLKGLCRDGNMDKVMRIYXXXXX 771
RGM + + EA KLV SD SY+AL+KG C GN+++ + Y
Sbjct: 246 RGM-FRDNRISEAEKLV---GEMESNGIRSDVFSYNALIKGFCDSGNLEEAKKWYGEIEK 301
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
T+ LI GDLD A E+CLD R V + V +ALV
Sbjct: 302 NKCTP-------NLATYIILIPAFRKAGDLDKAFELCLDANNHGFFLKRTVFKQVAEALV 354
Query: 949 DNSREEDAKAL 981
+ R E+A L
Sbjct: 355 EKGRTEEASEL 365
>gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 189 bits (480), Expect = 2e-45
Identities = 116/313 (37%), Positives = 180/313 (57%), Gaps = 1/313 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + ++ + +E+ LEE NKY + +EGF R++N R + + Q+VFD +P
Sbjct: 77 TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGR---VGMFENAQKVFDEMP 133
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
+ C RTV SFNALL A + +K+D ++ +F +LP +LSI P+V SYN +IKGL GS
Sbjct: 134 ERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLSIEPDVASYNTLIKGLCGKGSF 193
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
A+ + DE+E KGLKPD TFN LL Y G+ +GE+IW+ M E+N+K D SYNA
Sbjct: 194 TEAVALIDEIE-NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNA 252
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
+L G+AM E KS E V L + ++ A++KG +G +D+ + Y
Sbjct: 253 RLLGLAM-ENKSEEMVSL-FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY---KE 307
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
P ++ +L+ GDL++A E+C + + + D V+Q VVDALV
Sbjct: 308 IEKNGCRPLKFV----FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALV 363
Query: 949 DNSREEDAKALVE 987
S++++A+ +VE
Sbjct: 364 KGSKQDEAEEIVE 376
>ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product
[Arabidopsis thaliana] gi|22531265|gb|AAM97136.1|
expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein
[Arabidopsis thaliana] gi|332641782|gb|AEE75303.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 394
Score = 188 bits (478), Expect = 4e-45
Identities = 115/313 (36%), Positives = 180/313 (57%), Gaps = 1/313 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + ++ + +E+ LEE NKY + +EGF R++N R + + Q+VFD +P
Sbjct: 77 TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGR---VGMFENAQKVFDEMP 133
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
+ C RT SFNALL A + +K+D ++ +F++LP +LSI P+V SYN +IKGL GS
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSF 193
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
A+ + DE+E KGLKPD TFN LL Y G+ +GE+IW+ M E+N+K D SYNA
Sbjct: 194 TEAVALIDEIE-NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNA 252
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
+L G+AM E KS E V L + ++ A++KG +G +D+ + Y
Sbjct: 253 RLLGLAM-ENKSEEMVSL-FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY---KE 307
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALV 948
P ++ +L+ GDL++A E+C + + + D V+Q VVDALV
Sbjct: 308 IEKNGCRPLKFV----FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALV 363
Query: 949 DNSREEDAKALVE 987
S++++A+ +VE
Sbjct: 364 KGSKQDEAEEIVE 376
>ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 378
Score = 187 bits (476), Expect = 7e-45
Identities = 117/334 (35%), Positives = 187/334 (55%), Gaps = 1/334 (0%)
Frame = +1
Query: 37 PSSNYSTKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQV 216
P + +R + + IE+ LE KY EGFAVR+++ + D Q +V
Sbjct: 56 PIYEETVRRLATAKRFNAIEEMLEHQKKYPDFADEGFAVRILSLYGKAGMFDNAQ---KV 112
Query: 217 FDLLPKYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLR 396
FD +P C RTV SFNAL+ A + +++D + +F+++P +LS+ P++ SYN++IK
Sbjct: 113 FDEMPDRNCVRTVLSFNALMGACVNSKRFDMAEKIFKEVPEKLSVEPDLVSYNILIKAFC 172
Query: 397 EMGSLDSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDT 576
+MGS DSA+ + ++ME KKG+KPD+ TFN +L Y + R SD ++IW +M E+N+ PD
Sbjct: 173 KMGSFDSAVLVLEKME-KKGMKPDVITFNTILDCLYGNQRFSDAKKIWGVMVEKNVVPDI 231
Query: 577 GSYNAKLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIY 756
SYNAKL G+A +E +S E +LV + S++AL+KG +GN+++ R Y
Sbjct: 232 RSYNAKLMGLA-LEKRSKEGAELV-KELRSSGVEPDVFSFNALIKGFVGEGNLEEAKRWY 289
Query: 757 XXXXXXXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAV 933
AP + T E L+ + + GD++ E+C D + + ++Q V
Sbjct: 290 ---GELVKSGCAPDKW----TFEMLVPFSCEKGDVEYGFELCKDIFQRRRLASAAMLQPV 342
Query: 934 VDALVDNSREEDAKALVERSWSEHRRKNILKMPT 1035
VD LV S E AK LV+ + ++ LK+P+
Sbjct: 343 VDGLVKASMIEQAKELVKLGNTNSYKRFNLKLPS 376
>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 187 bits (476), Expect = 7e-45
Identities = 116/309 (37%), Positives = 171/309 (55%), Gaps = 2/309 (0%)
Frame = +1
Query: 67 SKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKYGCP 246
+K ++ IE LE +Y E FAVRLM + + ++FD PK C
Sbjct: 29 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAH---KLFDEXPKLNCE 85
Query: 247 RTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDSALE 426
RTV SFNALL + +K+D++ F++LP L + P+V SYN+++ EMGSLDSAL
Sbjct: 86 RTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALS 145
Query: 427 MFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKLRGM 606
+ DEME K GL+PDL TFN LL+ FY +G +DGE+IW +M++ N+ P+ SYNAKLRG+
Sbjct: 146 VLDEME-KVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGV 204
Query: 607 AMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXXXXX 786
+ E + EAV+L+ + + ++L+KG C GN+++ R Y
Sbjct: 205 -ISENRMSEAVELI-DEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 262
Query: 787 XAPAAYITCETHETLIHGAYDNGDLDAALEICLDY--PVWHMEDRRVVQAVVDALVDNSR 960
T+ TLI + GD D A E+C + W +E ++Q V++ LV S+
Sbjct: 263 VR-------ATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEP-ALLQQVLEGLVKESK 314
Query: 961 EEDAKALVE 987
E+A LVE
Sbjct: 315 IEEATELVE 323
>ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 187 bits (475), Expect = 9e-45
Identities = 117/335 (34%), Positives = 187/335 (55%), Gaps = 5/335 (1%)
Frame = +1
Query: 52 STKRF-SKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLL 228
ST RF + R++ IE+ +E KY EGF +RL+ + + ++FD L
Sbjct: 79 STVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQAR---KLFDEL 135
Query: 229 PKYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGS 408
P+ C RTVRSFNALL + +K +++D+++ +FR++P +LSI +V SYN++I EM
Sbjct: 136 PELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDD 195
Query: 409 LDSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYN 588
D A+ F+ ME K G++PDL TFN LL+ Y G+ DGE +W+ ME +NI PD SYN
Sbjct: 196 FDKAILFFNHME-KNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYN 254
Query: 589 AKLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXX 768
A+LRGM +++ + + ++L+ + Y+ L+ C+DG++++ + Y
Sbjct: 255 ARLRGM-VLDKRIQDGIELL-AKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLK 312
Query: 769 XXXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDYP----VWHMEDRRVVQAVV 936
A T+ TL+ + GD D+ L++C + V+H + VQ VV
Sbjct: 313 ESEVDPNA-------TTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAE---VQRVV 362
Query: 937 DALVDNSREEDAKALVERSWSEHRRKNILKMPTSS 1041
D L + S+ E+AK LVE S++ K LK+P +S
Sbjct: 363 DGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNS 397
>ref|XP_006377270.1| hypothetical protein POPTR_0011s03510g [Populus trichocarpa]
gi|550327503|gb|ERP55067.1| hypothetical protein
POPTR_0011s03510g [Populus trichocarpa]
Length = 295
Score = 186 bits (473), Expect = 2e-44
Identities = 122/307 (39%), Positives = 168/307 (54%), Gaps = 7/307 (2%)
Frame = +1
Query: 136 REGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKYGCPRTVRSFNALLQAYLKFEKYDELK 315
+EGF RL++ D + +VFD + + C RTV SFNALL A L + +DE++
Sbjct: 3 KEGFNARLISLYGSVGMFDHAR---KVFDEMRERQCARTVMSFNALLGACLSSKNFDEVE 59
Query: 316 NLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDSALEMFDEMEKKKGLKPDLATFNALLS 495
LFR L ++ I P++ SYN +IK EMGSLDSA+ + DEM K+KGL+PDL TFN LL
Sbjct: 60 GLFRGLSKEIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEM-KRKGLEPDLITFNTLLH 118
Query: 496 GFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKLRGMAMIEGKSCEAVKLVXXXXXXXXX 675
GFY +GR DGERIW M+ERN++P+ SY+AKL MA K + V V
Sbjct: 119 GFYANGRFVDGERIWDQMKERNVEPNIRSYSAKLFRMA--SEKRMKDVARVVEEMNSKGI 176
Query: 676 XXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXXXXXXAPAAYITCETH----ETLIHGA 843
+ SYHAL++G + + D+ R Y C+ H ETLI +
Sbjct: 177 KHDPFSYHALIRGFVNEDDFDEAKRWYGEMLKNG-----------CKPHRLVFETLIPFS 225
Query: 844 YDNGDLDAALEICLDYPVWHME---DRRVVQAVVDALVDNSREEDAKALVERSWSEHRRK 1014
+ GDL A ++C+D + H + ++Q+VVDAL SR +AK LV S
Sbjct: 226 VEKGDLAFAFKLCMD--LIHSKLVVQEALIQSVVDALAKESRIAEAKELVGHGESGRAHS 283
Query: 1015 NILKMPT 1035
LK+PT
Sbjct: 284 YKLKLPT 290
>ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 185 bits (470), Expect = 3e-44
Identities = 115/342 (33%), Positives = 193/342 (56%), Gaps = 4/342 (1%)
Frame = +1
Query: 28 HEIPSSNYSTKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVV 207
H+ + + + + + R++ IE +E KY EGFA RL+ + +
Sbjct: 72 HKKGTFDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHAR-- 129
Query: 208 QQVFDLLPKYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIK 387
++FD LP+ C RTV+SFN+LL + +K +++D+++ +FR++P ++SI +V SYN++I
Sbjct: 130 -KLFDELPELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVIN 188
Query: 388 GLREMGSLDSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIK 567
EM +LD A+ F +ME K G++P+L TFN LL+ Y G+ DGER+W+ ME +NI
Sbjct: 189 AFCEMDALDKAILFFHDME-KNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIA 247
Query: 568 PDTGSYNAKLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVM 747
PD SYNA+LRGM ++E + + ++L+ + SY+ L+KG C+DG++++
Sbjct: 248 PDLVSYNARLRGM-VLEKRIQDGIELL-AKMEEKEIKPDVYSYNILIKGFCQDGDLEEAK 305
Query: 748 RIYXXXXXXXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDYP----VWHMEDR 915
+ Y A T+ L+ + GD D+ L++C + V+H +
Sbjct: 306 KWYYKLKESEVDPIA-------TTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAE- 357
Query: 916 RVVQAVVDALVDNSREEDAKALVERSWSEHRRKNILKMPTSS 1041
VQ VV+ L + S+ E+AK LVE S++ K LK+P +S
Sbjct: 358 --VQRVVNGLAEVSKIEEAKDLVELYNSKNNLKFKLKLPQNS 397
>ref|XP_002304977.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847941|gb|EEE85488.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 381
Score = 185 bits (470), Expect = 3e-44
Identities = 122/329 (37%), Positives = 183/329 (55%), Gaps = 1/329 (0%)
Frame = +1
Query: 58 KRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKY 237
+R + ++ + +E+ LE +Y +EGF RL++ D + +VFD + +
Sbjct: 67 RRLAAAKKFRYVEEILENQKQYQDMSKEGFNARLISLYGSSGMFDNAR---KVFDEMLER 123
Query: 238 GCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDS 417
C RTV SFNALL A + +K+DE+ LFR L +L I P++ SYN ++K EMGSLDS
Sbjct: 124 KCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCEMGSLDS 183
Query: 418 ALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKL 597
A+ + DE+E KKGLKPDL TFN LL+G Y +GR GERIW M+E+N+KPD SYN KL
Sbjct: 184 AVSLLDEIE-KKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYNEKL 242
Query: 598 RGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXX 777
G+A +E + +A K+V + SY+AL++G +G++++ Y
Sbjct: 243 LGLA-LEKRMKDATKVV-EEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSD 300
Query: 778 XXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDYPVWHMEDRR-VVQAVVDALVDN 954
T +TLI + GD+ A ++C D + + ++Q V+DAL
Sbjct: 301 IKPDK-------LTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKE 353
Query: 955 SREEDAKALVERSWSEHRRKNILKMPTSS 1041
S+ +AK LVE S+ RR + LK+ S
Sbjct: 354 SKINEAKELVE--LSKARRSDSLKLTLPS 380
>ref|XP_006343276.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Solanum tuberosum]
Length = 379
Score = 184 bits (468), Expect = 6e-44
Identities = 120/327 (36%), Positives = 179/327 (54%), Gaps = 2/327 (0%)
Frame = +1
Query: 61 RFSKREEKKTIEQRLEEHNKYG-HAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLPKY 237
R + + K IE+ LE +Y +E FA RL++ + + Q +VFD +P+
Sbjct: 64 RLASAKRYKWIEEILEHQKQYRPDISKESFAARLVSLYGKSGLFENAQ---KVFDEMPER 120
Query: 238 GCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSLDS 417
C ++V+S NALL A + +KYD+L+ LF +L +L + P+V +YN+MIKGL + G LD
Sbjct: 121 NCKQSVKSVNALLGACVNSQKYDKLEGLFEELLEKLKVKPDVVTYNIMIKGLCDKGELDK 180
Query: 418 ALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNAKL 597
A DE+E K GLKPDL TFN +L FY +G+ DGE++W +M +N+ PD SYNAKL
Sbjct: 181 AAAFVDEIE-KNGLKPDLVTFNTILGVFYSNGKFDDGEKMWKLMVSKNVVPDIRSYNAKL 239
Query: 598 RGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXXXX 777
G+ M E K EA KLV + +Y AL++G C+ N+++ + Y
Sbjct: 240 VGL-MNENKVSEAAKLV-GELGSFELKPDVFTYGALIRGFCKMSNLEEAKKWY---EELV 294
Query: 778 XXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLD-YPVWHMEDRRVVQAVVDALVDN 954
AP I ++I A + GD D ALE+C + + D +++Q VVD LV +
Sbjct: 295 KSSSAPNKVI----FASVISSACEKGDFDWALELCKEVFKRKCNVDAKLLQRVVDGLVSS 350
Query: 955 SREEDAKALVERSWSEHRRKNILKMPT 1035
SR +AK +V S L +P+
Sbjct: 351 SRIREAKEVVHLGKSNDYHLYKLNLPS 377
>ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata] gi|297330788|gb|EFH61207.1| hypothetical protein
ARALYDRAFT_478692 [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 182 bits (463), Expect = 2e-43
Identities = 113/313 (36%), Positives = 179/313 (57%), Gaps = 1/313 (0%)
Frame = +1
Query: 52 STKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVFDLLP 231
+ +R + ++ + +E+ LEE NKY + +EGF R++N R + + Q+VFD +P
Sbjct: 77 TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGR---VGMFENAQKVFDEMP 133
Query: 232 KYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLREMGSL 411
+ C RTV SFNALL A + +K+D ++++F++LP ++SI P+V SYN +IKGL GS
Sbjct: 134 ERNCKRTVLSFNALLNACVNSKKFDLVESIFKELPGKISIEPDVASYNTLIKGLCGKGSF 193
Query: 412 DSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTGSYNA 591
A+ + DE+E KGLKPD TFN LL Y G+ +GE+IW+ M E+ +K D SYNA
Sbjct: 194 TEAVALIDEIE-NKGLKPDHITFNILLHESYTKGKFEEGEKIWARMVEKKVKRDIRSYNA 252
Query: 592 KLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSDSYHALLKGLCRDGNMDKVMRIYXXXXX 771
+L G+AM E KS E V L + ++ A++KG +G +D+ + Y
Sbjct: 253 RLLGLAM-EKKSEEMVSL-FDELKVNELKPDVFTFTAMIKGFAGEGRLDEAITWY---KE 307
Query: 772 XXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDYPVWH-MEDRRVVQAVVDALV 948
P ++ +L+ DL++A E+C + V + D V+Q VVD LV
Sbjct: 308 IEKNGCRPMKFV----FNSLLPAICKACDLESAYELCKEIFVKRLLVDEAVLQEVVDTLV 363
Query: 949 DNSREEDAKALVE 987
S++++A+ +VE
Sbjct: 364 KGSKQDEAEEIVE 376
>ref|XP_007025894.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508781260|gb|EOY28516.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 383
Score = 182 bits (462), Expect = 3e-43
Identities = 116/324 (35%), Positives = 175/324 (54%), Gaps = 8/324 (2%)
Frame = +1
Query: 40 SSNYSTKRFSKREEKKTIEQRLEEHNKYGHAYREGFAVRLMNHEARKDCIDAVQVVQQVF 219
S + + +R + ++ I+ L+ KY +EGF +RLM + + Q ++F
Sbjct: 68 SYDRTVRRLASAKQFSLIDDILQHQKKYQDIAQEGFVIRLMTLYGKAGMFEHAQ---KLF 124
Query: 220 DLLPKYGCPRTVRSFNALLQAYLKFEKYDELKNLFRQLPSQLSITPNVHSYNLMIKGLRE 399
D +P+ C RTV+SFNALL A + EK+ ++ L + LP +L I P++ SYN +IK E
Sbjct: 125 DEMPELKCDRTVKSFNALLSACIYSEKFGNVEQLLK-LPEKLGIEPDLVSYNTVIKAFCE 183
Query: 400 MGSLDSALEMFDEMEKKKGLKPDLATFNALLSGFYDSGRLSDGERIWSMMEERNIKPDTG 579
MGSLDSAL + D +EKK GL+PD+ TFN LL G + GR++DGE+IW +MEE+N+ P+
Sbjct: 184 MGSLDSALSVVDTLEKK-GLEPDVITFNTLLDGLFSKGRIADGEKIWGLMEEKNVVPNVR 242
Query: 580 SYNAKLRGMAMIEGKSCEAVKLVXXXXXXXXXXXNSD--SYHALLKGLCRDGNMDKVMRI 753
+YN+KLRG+ + E VK V D SY+A++KG C GN+++V +
Sbjct: 243 TYNSKLRGLVYEK----EIVKAVELWEEMENKGIKPDVYSYNAMIKGYCNAGNIEQVKKW 298
Query: 754 YXXXXXXXXXXXAPAAYITCETHETLIHGAYDNGDLDAALEICLDYPVWHMEDRRVV--- 924
Y T+ TL+ + + A+E+C + DRRV
Sbjct: 299 YTELKKSGISPDR-------VTYVTLVSFLCKKSEFEMAVELCKE-----SLDRRVTAGA 346
Query: 925 ---QAVVDALVDNSREEDAKALVE 987
Q V+ LV SR ++A LVE
Sbjct: 347 AMFQTVIGGLVKESRIDEAIQLVE 370