BLASTX nr result
ID: Cocculus22_contig00015950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00015950
(281 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003607832.1| DNA-damage-repair/toleration protein DRT111 ... 103 3e-20
ref|XP_004505345.1| PREDICTED: DNA-damage-repair/toleration prot... 102 7e-20
ref|XP_002316803.2| DNA-damage-repair/toleration protein DRT111 ... 99 5e-19
ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration prot... 96 4e-18
emb|CAN77677.1| hypothetical protein VITISV_023439 [Vitis vinifera] 96 4e-18
ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration prot... 96 7e-18
ref|XP_007211423.1| hypothetical protein PRUPE_ppa007087mg [Prun... 95 9e-18
ref|XP_007022863.1| D111/G-patch domain-containing protein [Theo... 94 3e-17
ref|XP_002890874.1| hypothetical protein ARALYDRAFT_473276 [Arab... 92 6e-17
gb|EXB75234.1| DNA-damage-repair/toleration protein [Morus notab... 92 7e-17
ref|XP_004293991.1| PREDICTED: DNA-damage-repair/toleration prot... 91 2e-16
ref|XP_006305071.1| hypothetical protein CARUB_v10009438mg [Caps... 90 3e-16
ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Ar... 89 6e-16
ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration prot... 88 1e-15
ref|XP_006415466.1| hypothetical protein EUTSA_v10007861mg [Eutr... 87 2e-15
ref|XP_006468298.1| PREDICTED: DNA-damage-repair/toleration prot... 84 2e-14
ref|XP_003529447.1| PREDICTED: DNA-damage-repair/toleration prot... 84 2e-14
ref|XP_007157820.1| hypothetical protein PHAVU_002G100900g [Phas... 84 2e-14
ref|XP_002300401.2| hypothetical protein POPTR_0001s38150g [Popu... 83 3e-14
ref|XP_006387980.1| hypothetical protein POPTR_0436s00220g, part... 82 1e-13
>ref|XP_003607832.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
gi|355508887|gb|AES90029.1| DNA-damage-repair/toleration
protein DRT111 [Medicago truncatula]
Length = 390
Score = 103 bits (256), Expect = 3e-20
Identities = 58/93 (62%), Positives = 63/93 (67%)
Frame = -2
Query: 280 GGGGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXX 101
G GG VPRSPSPP +VDGFSI GQMTAAQRMMAKM
Sbjct: 184 GSGGRGVPRSPSPPGSVDGFSIGKSETVGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKQE 243
Query: 100 XGITTPLVAKKTDRRAGVIVNASESKTEKKVKS 2
GITTPL+AKKTDRRAGVIVNAS+SK++KKVKS
Sbjct: 244 QGITTPLMAKKTDRRAGVIVNASDSKSDKKVKS 276
>ref|XP_004505345.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Cicer arietinum]
Length = 383
Score = 102 bits (253), Expect = 7e-20
Identities = 57/93 (61%), Positives = 63/93 (67%)
Frame = -2
Query: 280 GGGGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXX 101
GGG VPRSPSPP NVDGF+I GQMTAAQRMMAKM
Sbjct: 177 GGGAVPVPRSPSPPGNVDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQE 236
Query: 100 XGITTPLVAKKTDRRAGVIVNASESKTEKKVKS 2
GITTPL+AKKTDRRAGVIVNAS++K++KKVKS
Sbjct: 237 QGITTPLMAKKTDRRAGVIVNASDNKSDKKVKS 269
>ref|XP_002316803.2| DNA-damage-repair/toleration protein DRT111 [Populus trichocarpa]
gi|550328045|gb|EEE97415.2| DNA-damage-repair/toleration
protein DRT111 [Populus trichocarpa]
Length = 365
Score = 99.4 bits (246), Expect = 5e-19
Identities = 58/90 (64%), Positives = 59/90 (65%)
Frame = -2
Query: 271 GSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGI 92
G VPRSPSPPSN DGF I GQMTAAQRMMAKM GI
Sbjct: 163 GGGVPRSPSPPSNGDGFRIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 222
Query: 91 TTPLVAKKTDRRAGVIVNASESKTEKKVKS 2
TTPL+AKKTDRRAGVIVNASESK EKKVKS
Sbjct: 223 TTPLMAKKTDRRAGVIVNASESKPEKKVKS 252
>ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic [Vitis vinifera]
Length = 383
Score = 96.3 bits (238), Expect = 4e-18
Identities = 56/88 (63%), Positives = 60/88 (68%)
Frame = -2
Query: 265 AVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITT 86
AVPRSPSPP++ DGF+I GQMTAAQRMMAKM GITT
Sbjct: 182 AVPRSPSPPTSGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 241
Query: 85 PLVAKKTDRRAGVIVNASESKTEKKVKS 2
PL+AKKTDRRAGVIVNASESK EKKVKS
Sbjct: 242 PLMAKKTDRRAGVIVNASESKPEKKVKS 269
>emb|CAN77677.1| hypothetical protein VITISV_023439 [Vitis vinifera]
Length = 366
Score = 96.3 bits (238), Expect = 4e-18
Identities = 56/88 (63%), Positives = 60/88 (68%)
Frame = -2
Query: 265 AVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITT 86
AVPRSPSPP++ DGF+I GQMTAAQRMMAKM GITT
Sbjct: 165 AVPRSPSPPTSGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 224
Query: 85 PLVAKKTDRRAGVIVNASESKTEKKVKS 2
PL+AKKTDRRAGVIVNASESK EKKVKS
Sbjct: 225 PLMAKKTDRRAGVIVNASESKPEKKVKS 252
>ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Cucumis sativus]
Length = 372
Score = 95.5 bits (236), Expect = 7e-18
Identities = 54/88 (61%), Positives = 61/88 (69%)
Frame = -2
Query: 265 AVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITT 86
A+PRSPSPPS+VDGFSI GQMTAAQRMMAKM GITT
Sbjct: 171 AIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 230
Query: 85 PLVAKKTDRRAGVIVNASESKTEKKVKS 2
PL+AKKTD RAGVIVNA+++K+EKKVKS
Sbjct: 231 PLMAKKTDLRAGVIVNANDTKSEKKVKS 258
>ref|XP_007211423.1| hypothetical protein PRUPE_ppa007087mg [Prunus persica]
gi|462407288|gb|EMJ12622.1| hypothetical protein
PRUPE_ppa007087mg [Prunus persica]
Length = 382
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/88 (61%), Positives = 59/88 (67%)
Frame = -2
Query: 265 AVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITT 86
A+PRSPSPP+N DGF+I GQMTAAQRMMAKM GITT
Sbjct: 181 AIPRSPSPPNNGDGFTIGKSESGGLGLGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITT 240
Query: 85 PLVAKKTDRRAGVIVNASESKTEKKVKS 2
PL+AKKTDRRAGVIVNASE+K EKK KS
Sbjct: 241 PLMAKKTDRRAGVIVNASETKPEKKAKS 268
>ref|XP_007022863.1| D111/G-patch domain-containing protein [Theobroma cacao]
gi|508778229|gb|EOY25485.1| D111/G-patch
domain-containing protein [Theobroma cacao]
Length = 382
Score = 93.6 bits (231), Expect = 3e-17
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = -2
Query: 262 VPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITTP 83
VPRSPSPP N +GF+I GQMTAAQRMMAKM GITTP
Sbjct: 182 VPRSPSPPGNAEGFTIGKSETSGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTP 241
Query: 82 LVAKKTDRRAGVIVNASESKTEKKVKS 2
L+AKKTDRRAGVIVNASE+K +KKVKS
Sbjct: 242 LMAKKTDRRAGVIVNASETKPDKKVKS 268
>ref|XP_002890874.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata] gi|297336716|gb|EFH67133.1| hypothetical protein
ARALYDRAFT_473276 [Arabidopsis lyrata subsp. lyrata]
Length = 385
Score = 92.4 bits (228), Expect = 6e-17
Identities = 57/96 (59%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = -2
Query: 280 GGGGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXX 101
GGG RS SPP NVDGFSI GQMTAAQRMMAKM
Sbjct: 177 GGGSGGKRRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSE 236
Query: 100 XGITTPLVAKKTDRRAGVIVNASESKT---EKKVKS 2
GITTPL+AKKTDRRAGVIVNASE+K+ EKKVKS
Sbjct: 237 QGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVKS 272
>gb|EXB75234.1| DNA-damage-repair/toleration protein [Morus notabilis]
Length = 378
Score = 92.0 bits (227), Expect = 7e-17
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = -2
Query: 265 AVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITT 86
A+PRSPSPPS+ DGF I G MTAAQRMMAKM GITT
Sbjct: 177 ALPRSPSPPSSGDGFIIGKSETGGLGVGAGGHMTAAQRMMAKMGWKEGQGLGKQEQGITT 236
Query: 85 PLVAKKTDRRAGVIVNASESKTEKKVKS 2
PL+AKKTDRRAGVIVNASE+K EKKVKS
Sbjct: 237 PLMAKKTDRRAGVIVNASEAKPEKKVKS 264
>ref|XP_004293991.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 386
Score = 90.9 bits (224), Expect = 2e-16
Identities = 55/93 (59%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Frame = -2
Query: 274 GGSAVP---RSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXX 104
G +AVP RSPSPPS+ DGF I GQMTAAQRMMAKM
Sbjct: 179 GSAAVPVAPRSPSPPSDADGFMIGKSESGGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKL 238
Query: 103 XXGITTPLVAKKTDRRAGVIVNASESKTEKKVK 5
GITTPL+AKKTDRRAGVIVNASE+K EKK K
Sbjct: 239 EQGITTPLMAKKTDRRAGVIVNASETKPEKKAK 271
>ref|XP_006305071.1| hypothetical protein CARUB_v10009438mg [Capsella rubella]
gi|482573782|gb|EOA37969.1| hypothetical protein
CARUB_v10009438mg [Capsella rubella]
Length = 382
Score = 90.1 bits (222), Expect = 3e-16
Identities = 56/93 (60%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = -2
Query: 277 GGGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXX 98
GG RS SPP NVDGFSI GQMTAAQRMMAKM
Sbjct: 177 GGSVGKRRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQ 236
Query: 97 GITTPLVAKKTDRRAGVIVNASESKT-EKKVKS 2
GITTPL+AKKTDRRAGVIVNASE+K+ EKKVKS
Sbjct: 237 GITTPLMAKKTDRRAGVIVNASENKSAEKKVKS 269
>ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
gi|20141383|sp|P42698.2|DR111_ARATH RecName:
Full=DNA-damage-repair/toleration protein DRT111,
chloroplastic; Flags: Precursor
gi|6634771|gb|AAF19751.1|AC009917_10 Strong similarity
to gi|1169200 DNA-Damage-Repair/Toleration protein
(DRT111) precurser, and contains a G-patch PF|01585
domain and RNA recognition PF|00076 motif. EST
gb|AA395591 comes from this gene [Arabidopsis thaliana]
gi|15028005|gb|AAK76533.1| putative DNA damage repair
protein [Arabidopsis thaliana]
gi|20259641|gb|AAM14338.1| putative DNA damage repair
protein [Arabidopsis thaliana]
gi|332193110|gb|AEE31231.1| DNA-damage-repair/toleration
protein DRT111 [Arabidopsis thaliana]
Length = 387
Score = 89.0 bits (219), Expect = 6e-16
Identities = 55/94 (58%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = -2
Query: 280 GGGGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXX 101
GGG RS SPP NVDGFSI GQMTAAQRMMAKM
Sbjct: 178 GGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSE 237
Query: 100 XGITTPLVAKKTDRRAGVIVNASESKT---EKKV 8
GITTPL+AKKTDRRAGVIVNASE+K+ EKKV
Sbjct: 238 QGITTPLMAKKTDRRAGVIVNASENKSSSAEKKV 271
>ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 392
Score = 88.2 bits (217), Expect = 1e-15
Identities = 56/97 (57%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Frame = -2
Query: 280 GGGGSAVPRSPSPP-SNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXX 104
G G VPRSPSPP NVDGF+I GQMTAAQRMMAKM
Sbjct: 182 GSGAVLVPRSPSPPPGNVDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQ 241
Query: 103 XXGITTPLVAKKTDRRAGVIVNASE---SKTEKKVKS 2
GITTPL+AKKTDRRAGVIVNAS+ S + KKVKS
Sbjct: 242 EQGITTPLMAKKTDRRAGVIVNASDNNNSSSSKKVKS 278
>ref|XP_006415466.1| hypothetical protein EUTSA_v10007861mg [Eutrema salsugineum]
gi|557093237|gb|ESQ33819.1| hypothetical protein
EUTSA_v10007861mg [Eutrema salsugineum]
Length = 390
Score = 87.4 bits (215), Expect = 2e-15
Identities = 55/92 (59%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -2
Query: 274 GGSAVPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXG 95
GGS RS SPP +VDGFSI GQMTAAQRMM KM G
Sbjct: 186 GGSGKRRSSSPPGSVDGFSIGKSESSGLGVGAGGQMTAAQRMMEKMGWKQGQGLGKSEQG 245
Query: 94 ITTPLVAKKTDRRAGVIVNASESK-TEKKVKS 2
ITTPL+AKKTDRRAGVIVNASE K +EKKVKS
Sbjct: 246 ITTPLMAKKTDRRAGVIVNASEIKSSEKKVKS 277
>ref|XP_006468298.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Citrus sinensis]
Length = 381
Score = 84.3 bits (207), Expect = 2e-14
Identities = 54/97 (55%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Frame = -2
Query: 271 GSAVPRSPSPPS-NVD------GFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXX 113
G PRSPSPP NV+ GF+I GQMTAAQRMMAKM
Sbjct: 171 GGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGL 230
Query: 112 XXXXXGITTPLVAKKTDRRAGVIVNASESKTEKKVKS 2
GITTPL+A+KTDRRAGVIVNASE+K+EKKVKS
Sbjct: 231 GRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS 267
>ref|XP_003529447.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 384
Score = 84.3 bits (207), Expect = 2e-14
Identities = 54/96 (56%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Frame = -2
Query: 280 GGGGSAVPRSPSPP--SNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXX 107
G A PRSPSPP N DGFSI GQMTAAQRMMAKM
Sbjct: 175 GAAAGAPPRSPSPPLPGNSDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGK 234
Query: 106 XXXGITTPLVAKKTDRRAGVIVNASE-SKTEKKVKS 2
GITTPL+AKKTDRRAGVIVNAS+ + + KKVKS
Sbjct: 235 QEQGITTPLMAKKTDRRAGVIVNASDNNSSSKKVKS 270
>ref|XP_007157820.1| hypothetical protein PHAVU_002G100900g [Phaseolus vulgaris]
gi|561031235|gb|ESW29814.1| hypothetical protein
PHAVU_002G100900g [Phaseolus vulgaris]
Length = 370
Score = 84.0 bits (206), Expect = 2e-14
Identities = 54/90 (60%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = -2
Query: 265 AVPRSPSPP--SNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGI 92
AVPRSPSPP +N DGFSI GQMTAAQRMMAKM GI
Sbjct: 169 AVPRSPSPPPTANSDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 228
Query: 91 TTPLVAKKTDRRAGVIVNASESKTEKKVKS 2
TTPL+AKKTDRRAGVIVNAS++ KKVKS
Sbjct: 229 TTPLMAKKTDRRAGVIVNASDN--SKKVKS 256
>ref|XP_002300401.2| hypothetical protein POPTR_0001s38150g [Populus trichocarpa]
gi|550349155|gb|EEE85206.2| hypothetical protein
POPTR_0001s38150g [Populus trichocarpa]
Length = 370
Score = 83.2 bits (204), Expect = 3e-14
Identities = 53/87 (60%), Positives = 54/87 (62%)
Frame = -2
Query: 262 VPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITTP 83
VPRS SPP N DGFSI GQMTAAQRMMAKM GITTP
Sbjct: 174 VPRSSSPPRNGDGFSIGTSGTVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTP 233
Query: 82 LVAKKTDRRAGVIVNASESKTEKKVKS 2
L+AKKTDRRAGVIVNAS EKKVKS
Sbjct: 234 LMAKKTDRRAGVIVNAS----EKKVKS 256
>ref|XP_006387980.1| hypothetical protein POPTR_0436s00220g, partial [Populus
trichocarpa] gi|550309099|gb|ERP46894.1| hypothetical
protein POPTR_0436s00220g, partial [Populus trichocarpa]
Length = 205
Score = 81.6 bits (200), Expect = 1e-13
Identities = 52/87 (59%), Positives = 53/87 (60%)
Frame = -2
Query: 262 VPRSPSPPSNVDGFSIXXXXXXXXXXXXXGQMTAAQRMMAKMXXXXXXXXXXXXXGITTP 83
VPRS SPP N DGFSI GQMTAAQRMM KM GITTP
Sbjct: 104 VPRSSSPPRNGDGFSIGTSGTVGLGVGAGGQMTAAQRMMTKMGWKEGQGLGKHEQGITTP 163
Query: 82 LVAKKTDRRAGVIVNASESKTEKKVKS 2
L+AKKTDRRAGVIVNAS EKKVKS
Sbjct: 164 LMAKKTDRRAGVIVNAS----EKKVKS 186