BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00015945
         (241 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD11834.1| reverse transcriptase [Brassica nigra]                 80   3e-13
gb|AFS30564.1| reverse transcriptase, partial [Petunia x hybrida]      79   5e-13
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]    78   1e-12
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]    77   2e-12
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    77   2e-12
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]    77   2e-12
emb|CAD11838.1| reverse transcriptase [Brassica oleracea var. ra...    77   2e-12
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    77   2e-12
gb|ADE44149.1| reverse transcriptase [Corchorus olitorius]             76   6e-12
gb|ADE44142.1| reverse transcriptase [Corchorus olitorius]             75   7e-12
gb|ABF57081.1| reverse transcriptase [Prunus mume]                     75   7e-12
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    75   7e-12
gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thali...    75   9e-12
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    75   9e-12
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    75   9e-12
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]               75   1e-11
ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [S...    74   2e-11
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    74   2e-11
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]    74   2e-11
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]    74   2e-11

>emb|CAD11834.1| reverse transcriptase [Brassica nigra]
          Length = 88

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY+ QP  FEDK HP  VC L+KA+ GLK APRAWF K SS LL++GF C   D S+FV
Sbjct: 11  TVYMKQPPGFEDKAHPDYVCLLHKAIYGLKQAPRAWFDKFSSFLLEFGFQCNVKDPSLFV 70

Query: 60  YK 55
           Y+
Sbjct: 71  YQ 72


>gb|AFS30564.1| reverse transcriptase, partial [Petunia x hybrida]
          Length = 87

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/62 (59%), Positives = 47/62 (75%)
 Frame = -2

Query: 237 VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
           VY+ QP  F D  +PT VC+L+KAL GLK APRAWF +LSS L ++GF+  KSDSS+F+ 
Sbjct: 12  VYMSQPAGFTDPRYPTHVCRLHKALYGLKQAPRAWFERLSSALFEYGFVSSKSDSSLFIR 71

Query: 57  KC 52
           KC
Sbjct: 72  KC 73


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = -2

Query: 237  VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
            V+++QP  FED   PT VC+L KAL GLK APRAWFHKLSS LLQ GF C ++D+S+F +
Sbjct: 921  VFMMQPPGFEDNSCPTHVCRLQKALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYF 980


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY+ QP  F    HP  VCKL KAL GLK APR WFHKL   L  WGF+   SD+S+F+
Sbjct: 613 TVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFI 672

Query: 60  YK 55
           YK
Sbjct: 673 YK 674


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
            putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -2

Query: 240  TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
            TVY+ QP  FE++  P  VCKLNKA+ GLK APRAWF K S+ LL++GF+C  SD S+FV
Sbjct: 999  TVYMYQPPGFENQDRPDYVCKLNKAIYGLKQAPRAWFDKFSTFLLEFGFICTYSDPSLFV 1058

Query: 60   Y 58
            +
Sbjct: 1059 F 1059


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 45/61 (73%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY+ QPL + D  HP  VCKL KAL GLK APRAWF + SS LL+ GF C ++D+S+FV
Sbjct: 399 TVYMEQPLGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKLGFFCSRADTSLFV 458

Query: 60  Y 58
           +
Sbjct: 459 F 459


>emb|CAD11838.1| reverse transcriptase [Brassica oleracea var. ramosa]
          Length = 87

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY+ QP  FEDK HP  VC L+K + GLK  PRAWF K SS L+++GF+C  S  S+FV
Sbjct: 11  TVYMRQPPGFEDKEHPQYVCNLHKVIYGLKQTPRAWFDKFSSFLIEFGFICNSSHPSLFV 70

Query: 60  YK 55
           Y+
Sbjct: 71  YQ 72


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/61 (57%), Positives = 45/61 (73%)
 Frame = -2

Query: 240  TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
            TVY+ QP  F DK  PT VC L+K++ GLK +PRAWF K S+ LL++GF C KSD S+F+
Sbjct: 1046 TVYMTQPAGFVDKSKPTHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFI 1105

Query: 60   Y 58
            Y
Sbjct: 1106 Y 1106


>gb|ADE44149.1| reverse transcriptase [Corchorus olitorius]
          Length = 87

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = -2

Query: 237 VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
           VY+ QP  F D+ HPT VCKL+KAL GLK APRAW++ L S L+++GF   +SDSS+F++
Sbjct: 12  VYMKQPPDFIDQTHPTYVCKLDKALYGLKQAPRAWYNTLKSFLIRYGFSQSRSDSSLFIF 71

Query: 57  K 55
           K
Sbjct: 72  K 72


>gb|ADE44142.1| reverse transcriptase [Corchorus olitorius]
          Length = 87

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/62 (59%), Positives = 47/62 (75%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY+ QP  F D+ +PT VCKL+KAL GLK APRAW+  L S LLQ+GF   +SDSS+F+
Sbjct: 11  TVYMKQPPGFIDQSNPTYVCKLDKALYGLKQAPRAWYTTLKSFLLQYGFSQSRSDSSLFI 70

Query: 60  YK 55
           +K
Sbjct: 71  FK 72


>gb|ABF57081.1| reverse transcriptase [Prunus mume]
          Length = 88

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/61 (57%), Positives = 45/61 (73%)
 Frame = -2

Query: 237 VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
           VY+ QP  F D   P  VCKL+KAL GLK APRAWFH++SS LL +GF   +SDSS+F++
Sbjct: 12  VYMAQPPGFVDPTRPNYVCKLHKALYGLKQAPRAWFHRISSFLLSFGFQHSQSDSSLFIF 71

Query: 57  K 55
           +
Sbjct: 72  R 72


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = -2

Query: 240  TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
            TVY+ QP  F DK HP  VC L+KAL GLK APRAWF K S  LL +GF+C  SD S+FV
Sbjct: 975  TVYMKQPAGFIDKAHPDHVCLLHKALYGLKQAPRAWFDKFSKFLLSFGFVCSMSDPSLFV 1034


>gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thaliana]
          Length = 559

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY++QP  F DK  PT VC L+KAL GLK APRAWF K S+ LL++GF C   D S+F+
Sbjct: 254 TVYMLQPAGFVDKNKPTHVCHLHKALYGLKQAPRAWFDKFSNYLLEFGFSCSVKDLSLFI 313

Query: 60  Y 58
           Y
Sbjct: 314 Y 314


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = -2

Query: 240  TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
            TV++ QP  FED   P  VCKL KA+  LK APRAWF K SS LL++GF+C  SD S+FV
Sbjct: 918  TVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFV 977

Query: 60   Y 58
            Y
Sbjct: 978  Y 978


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = -2

Query: 240  TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
            TV++ QP  FED   P  VCKL KA+  LK APRAWF K SS LL++GF+C  SD S+FV
Sbjct: 1041 TVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFV 1100

Query: 60   Y 58
            Y
Sbjct: 1101 Y 1101


>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
          Length = 534

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/62 (58%), Positives = 44/62 (70%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY VQP  F D   P LVC+LNK+L GLK APRAW H+ +S L   GF+  KSDSS+F+
Sbjct: 148 TVYCVQPTGFVDSSRPGLVCRLNKSLYGLKQAPRAWHHRFASYLSSIGFVETKSDSSLFI 207

Query: 60  YK 55
           Y+
Sbjct: 208 YR 209


>ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [Sorghum bicolor]
           gi|241944926|gb|EES18071.1| hypothetical protein
           SORBIDRAFT_09g017840 [Sorghum bicolor]
          Length = 787

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = -2

Query: 240 TVYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFV 61
           TVY  QP  FED  HP  VC+LN++L GLK APRAW+ + +S LLQ GF+  K+D+S+FV
Sbjct: 648 TVYCAQPSGFEDSTHPDYVCRLNRSLYGLKQAPRAWYSRFASHLLQLGFVEAKTDASLFV 707

Query: 60  YK 55
           ++
Sbjct: 708 HQ 709


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -2

Query: 237 VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
           V+++QP  FED   PT VC+L KAL GLK  PRAWFHKLSS LLQ GF C ++++S+F +
Sbjct: 667 VFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYF 726


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = -2

Query: 237  VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
            VY+ QP  + D   PT VC+L KAL GLK APRAWF +LSS L+QWGF   ++DSSMF++
Sbjct: 942  VYMSQPPGYLDTTFPTKVCRLKKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLH 1001


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = -2

Query: 237 VYIVQPLRFEDKVHPTLVCKLNKALCGLK*APRAWFHKLSSVLLQWGFLCYKSDSSMFVY 58
           VY+ QP  + D   PT VC+L KAL GLK APRAWF +LSS L+QWGF   ++DSSMF++
Sbjct: 804 VYMSQPPGYLDTTFPTKVCRLKKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLH 863