BLASTX nr result
ID: Cocculus22_contig00015646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00015646
(730 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis] 281 2e-73
gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus... 279 6e-73
ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 278 1e-72
ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobrom... 278 1e-72
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 276 4e-72
ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citr... 276 5e-72
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 275 9e-72
ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 275 1e-71
ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 274 3e-71
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s... 274 3e-71
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c... 273 3e-71
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera] 273 4e-71
ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Caps... 272 8e-71
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 271 1e-70
ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 271 2e-70
ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutr... 269 8e-70
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 265 1e-68
ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis... 265 2e-68
dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana] 265 2e-68
ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata... 264 2e-68
>gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis]
Length = 325
Score = 281 bits (718), Expect = 2e-73
Identities = 137/196 (69%), Positives = 169/196 (86%), Gaps = 1/196 (0%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+M SQ+ +VF EAG V SVEVIY+RVTDRSRGF FVTMGS E+A+EAIR+FDGS
Sbjct: 120 GNLPYSMDSSQLAQVFGEAGTVFSVEVIYDRVTDRSRGFGFVTMGSVEEAQEAIRLFDGS 179
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFP+VPRGGERE++GPKIR+ N+ +VD+P+KIYAGNLGW LTSQ LRDAF
Sbjct: 180 QVGGRTVKVNFPQVPRGGEREVLGPKIRNMNK-GYVDSPHKIYAGNLGWGLTSQDLRDAF 238
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ GVLSAKVIY+RD G+SRG+GF+SF +AE +QSALDAMNGVE++GRPLRL++A +R
Sbjct: 239 ADQPGVLSAKVIYERDTGRSRGFGFVSFETAEASQSALDAMNGVEVQGRPLRLNMATERA 298
Query: 542 TVVAPKT-QEIHTDSI 586
+P+T E+ T+ +
Sbjct: 299 PPASPRTPPEVVTEGV 314
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + + S L F + V S +VIYDR +SRG+GF++ S EEAQ A+
Sbjct: 116 RLYVGNLPYSMDSSQLAQVFGEAGTVFSVEVIYDRVTDRSRGFGFVTMGSVEEAQEAIRL 175
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 176 FDGSQVGGRTVKVN 189
>gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus guttatus]
Length = 328
Score = 279 bits (714), Expect = 6e-73
Identities = 136/179 (75%), Positives = 160/179 (89%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP++MT +Q+ E+FAEAGRV SVE++Y+RVTDRSRGFAFVTMGS E+AKEAIR+FDG+
Sbjct: 121 GNLPFSMTSAQLSEIFAEAGRVVSVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGA 180
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRT KVN PEVPRGGERE+M PKIRSS Q FVD+PYKIYAGNL W+LTSQ LRD F
Sbjct: 181 QIGGRTAKVNIPEVPRGGEREVMSPKIRSS-YQGFVDSPYKIYAGNLSWNLTSQILRDTF 239
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQR 538
+ Q G LSAKVIYDRD G+SRG+GFI+FSSAE+ QSA+DA+NG+ELEGRPLRL+L+ QR
Sbjct: 240 SQQPGFLSAKVIYDRDSGRSRGFGFITFSSAEDVQSAMDALNGLELEGRPLRLNLSEQR 298
Score = 62.8 bits (151), Expect = 1e-07
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++YAGNL + +TS L + F + V+S +++YDR +SRG+ F++ S EEA+ A+
Sbjct: 117 RLYAGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 176
Query: 482 MNGVELEGRPLRLSL 526
+G ++ GR ++++
Sbjct: 177 FDGAQIGGRTAKVNI 191
>ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 323
Score = 278 bits (712), Expect = 1e-72
Identities = 137/194 (70%), Positives = 165/194 (85%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+MT S + EVFAEAG VAS E++Y+RVTDRSRGF FVTMGS E+AKEAIR+FDGS
Sbjct: 118 GNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGS 177
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGER MGPK+++S Q FVD+P+KIYAGNLGW LTSQGLRDAF
Sbjct: 178 QIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSPHKIYAGNLGWGLTSQGLRDAF 236
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
Q G+LSAKVI++R G+SRG+GF++F +AE+ QSALDAMNGVE+EGRPLRL++A +R
Sbjct: 237 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
Query: 542 TVVAPKTQEIHTDS 583
V P +E T++
Sbjct: 297 PPVLPAAKETKTEN 310
Score = 68.9 bits (167), Expect = 2e-09
Identities = 33/103 (32%), Positives = 58/103 (56%)
Frame = +2
Query: 215 PEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAFTDQSGVLSAKV 394
PE + E E + + A D ++Y GNL + +TS L + F + V SA++
Sbjct: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
Query: 395 IYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLS 523
+YDR +SRG+GF++ S EEA+ A+ +G ++ GR ++++
Sbjct: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN 187
>ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]
gi|508716608|gb|EOY08505.1| Chloroplast RNA-binding
protein 33 [Theobroma cacao]
Length = 340
Score = 278 bits (711), Expect = 1e-72
Identities = 136/207 (65%), Positives = 172/207 (83%), Gaps = 1/207 (0%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+MT S++ E+F EAGRVA+VE++Y+RVTDRSRGFAFVTM S + AKEAIR+FDGS
Sbjct: 135 GNLPYSMTSSELSEIFNEAGRVANVEIVYDRVTDRSRGFAFVTMASVDDAKEAIRLFDGS 194
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGERE+MGPKIR + +F+D+PYKIYAGNLGW +TSQGLRDAF
Sbjct: 195 QVGGRTVKVNFPEVPRGGEREVMGPKIRRGYK-SFLDSPYKIYAGNLGWGVTSQGLRDAF 253
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
Q G+LSAKVIY+RD G+SRG+GF+SF SAE ++AL+AMNGVE+EGRPLRL++AA R
Sbjct: 254 ASQPGLLSAKVIYERDTGRSRGFGFVSFESAETVEAALNAMNGVEVEGRPLRLNMAADRA 313
Query: 542 T-VVAPKTQEIHTDSIQEDATKSTIGA 619
+P+ + +S++ S++ A
Sbjct: 314 PGTPSPEMERNTKESLESSELLSSVTA 340
Score = 57.0 bits (136), Expect = 7e-06
Identities = 22/74 (29%), Positives = 48/74 (64%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L + F + V + +++YDR +SRG+ F++ +S ++A+ A+
Sbjct: 131 RLYVGNLPYSMTSSELSEIFNEAGRVANVEIVYDRVTDRSRGFAFVTMASVDDAKEAIRL 190
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 191 FDGSQVGGRTVKVN 204
>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 276 bits (707), Expect = 4e-72
Identities = 134/182 (73%), Positives = 163/182 (89%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY MT SQ+ EVFAEAG V SV+VIY++VTDRSRGFAFVTM + E+AKEAIRMFDGS
Sbjct: 120 GNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGS 179
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTV+VNFPEVPRGGE+E+MGP+IRSS + FVD+P+KIYAGNLGW LTSQ LRDAF
Sbjct: 180 QIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNK-FVDSPHKIYAGNLGWGLTSQSLRDAF 238
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
+Q G+LSAK+IYDR GKSRG+GF+SF +AE+A+SAL++MNGVE+EGRPLRL++AA ++
Sbjct: 239 ENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQS 298
Query: 542 TV 547
+
Sbjct: 299 PI 300
Score = 61.2 bits (147), Expect = 3e-07
Identities = 27/74 (36%), Positives = 49/74 (66%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
K+Y GNL + +TS L + F + V+S +VIYD+ +SRG+ F++ ++ EEA+ A+
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR +R++
Sbjct: 176 FDGSQIGGRTVRVN 189
>ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citrus clementina]
gi|557532104|gb|ESR43287.1| hypothetical protein
CICLE_v10012204mg [Citrus clementina]
Length = 322
Score = 276 bits (706), Expect = 5e-72
Identities = 136/194 (70%), Positives = 166/194 (85%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+MT S + EVFAEAG VAS E++Y+RVTDRSRGF FVTMGS E+AKEAIR+FDGS
Sbjct: 117 GNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGS 176
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGER MGPK+++S Q FVD+P+KIYAGNLGW LTSQGLRDAF
Sbjct: 177 QIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSPHKIYAGNLGWGLTSQGLRDAF 235
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
Q G+LSAKVI++R G+SRG+GF++F +AE+ QSALDAMNGVE+EGRPLRL++A +R
Sbjct: 236 QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 295
Query: 542 TVVAPKTQEIHTDS 583
V+ +E +T++
Sbjct: 296 PPVSLAAKETNTEN 309
Score = 67.8 bits (164), Expect = 4e-09
Identities = 31/90 (34%), Positives = 56/90 (62%)
Frame = +2
Query: 254 PKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYG 433
PK+ +S+ A ++Y GNL + +TS L + F + V SA+++YDR +SRG+G
Sbjct: 103 PKVAASDEAA------RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 156
Query: 434 FISFSSAEEAQSALDAMNGVELEGRPLRLS 523
F++ S EEA+ A+ +G ++ GR ++++
Sbjct: 157 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVN 186
>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 275 bits (704), Expect = 9e-72
Identities = 136/179 (75%), Positives = 159/179 (88%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+MT SQ+ +VF EAG V SVE++Y+RVTDRSRGFAFVTMGS ++AKEAIRMFDGS
Sbjct: 108 GNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGS 167
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGER +MGPKIRSS R FVD+PYKIYAGNL W LTS+GLRDAF
Sbjct: 168 QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYR-GFVDSPYKIYAGNLSWRLTSEGLRDAF 226
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQR 538
D G+L AKVIY+R+ G+SRG+GF+SF+SAE A+SAL+AMN VE+EGRPLRL+LAA R
Sbjct: 227 ADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVR 285
Score = 62.4 bits (150), Expect = 2e-07
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L D F + V+S +++YDR +SRG+ F++ S +EA+ A+
Sbjct: 104 RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 163
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 164 FDGSQVGGRTVKVN 177
>ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 328
Score = 275 bits (703), Expect = 1e-71
Identities = 135/192 (70%), Positives = 164/192 (85%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP++MTPSQ+ E+FAEAG+VA+VE++Y+RVTDRSRGFAFVTMGS E AKEA+R+FDGS
Sbjct: 131 GNLPFSMTPSQLSEIFAEAGKVANVEIVYDRVTDRSRGFAFVTMGSVEDAKEAVRLFDGS 190
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGER++M KIRS+ Q FVD+P+K+Y NL W+LTSQGL+DAF
Sbjct: 191 QVGGRTVKVNFPEVPRGGERQVMSAKIRST-YQGFVDSPHKLYVANLSWNLTSQGLKDAF 249
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ G LSAKVIYDR G+SRG+GFI+FSSAE +ALD MN V+LEGRPLRL++A QR+
Sbjct: 250 ADQPGFLSAKVIYDRASGRSRGFGFITFSSAEAMNNALDTMNEVDLEGRPLRLNIAGQRD 309
Query: 542 TVVAP---KTQE 568
V +P KT E
Sbjct: 310 PVSSPPVVKTSE 321
>ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 329
Score = 274 bits (700), Expect = 3e-71
Identities = 133/206 (64%), Positives = 169/206 (82%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP++MTPSQ+ E+F EAG+VA+VE++Y+RVTDRSRGFAFVTMGS E+A+EA+R+FDGS
Sbjct: 127 GNLPFSMTPSQLSEIFTEAGKVANVEIVYDRVTDRSRGFAFVTMGSVEEAEEAVRLFDGS 186
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGERE+M KIRS+ Q FVD+P+K+Y NL W+LTSQGL+DAF
Sbjct: 187 QVGGRTVKVNFPEVPRGGEREVMSAKIRST-YQGFVDSPHKLYVANLSWNLTSQGLKDAF 245
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ G LSAKVIYDR G+SRG+GFI+FSSAE +ALD MN V+LEGRPLRL++A Q++
Sbjct: 246 ADQPGFLSAKVIYDRASGRSRGFGFITFSSAEAMNNALDTMNEVDLEGRPLRLNIAGQKD 305
Query: 542 TVVAPKTQEIHTDSIQEDATKSTIGA 619
V +P + T + S++G+
Sbjct: 306 PVSSPPV--VETSDSENSEILSSLGS 329
Score = 58.5 bits (140), Expect = 2e-06
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +T L + FT+ V + +++YDR +SRG+ F++ S EEA+ A+
Sbjct: 123 RLYVGNLPFSMTPSQLSEIFTEAGKVANVEIVYDRVTDRSRGFAFVTMGSVEEAEEAVRL 182
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 183 FDGSQVGGRTVKVN 196
>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 274 bits (700), Expect = 3e-71
Identities = 135/198 (68%), Positives = 164/198 (82%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP++MT SQ+ E+FAEAG VA+VE++Y+RVTDRSRGFAFVTMGS E+AKEAIR+FDGS
Sbjct: 114 GNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGS 173
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGERE+M KIRS+ Q FVD+P+K+Y NL W LTSQGLRDAF
Sbjct: 174 QVGGRTVKVNFPEVPRGGEREVMSAKIRST-YQGFVDSPHKLYVANLSWALTSQGLRDAF 232
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ G +SAKVIYDR G+SRG+GFI+FSSAE +SALD MN VELEGRPLRL++A Q+
Sbjct: 233 ADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAGQKA 292
Query: 542 TVVAPKTQEIHTDSIQED 595
+ +P E ++ E+
Sbjct: 293 PLSSPSVVETSPENDSEN 310
Score = 58.5 bits (140), Expect = 2e-06
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L + F + V + +++YDR +SRG+ F++ S EEA+ A+
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 170 FDGSQVGGRTVKVN 183
>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
precursor - common tobacco gi|20005|emb|CAA37879.1|
unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 273 bits (699), Expect = 3e-71
Identities = 135/199 (67%), Positives = 164/199 (82%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP++MT SQ+ E+FAEAG VA+VE++Y+RVTDRSRGFAFVTMGS E+AKEAIR+FDGS
Sbjct: 119 GNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGS 178
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGERE+M KIRS+ Q FVD+P+K+Y NL W LTSQGLRDAF
Sbjct: 179 QVGGRTVKVNFPEVPRGGEREVMSAKIRST-YQGFVDSPHKLYVANLSWALTSQGLRDAF 237
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ G +SAKVIYDR G+SRG+GFI+FSSAE SALD MN VELEGRPLRL++A Q+
Sbjct: 238 ADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKA 297
Query: 542 TVVAPKTQEIHTDSIQEDA 598
V +P E ++ +++
Sbjct: 298 PVSSPPVVETSPENDSDNS 316
Score = 58.5 bits (140), Expect = 2e-06
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L + F + V + +++YDR +SRG+ F++ S EEA+ A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 175 FDGSQVGGRTVKVN 188
>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 273 bits (698), Expect = 4e-71
Identities = 135/179 (75%), Positives = 158/179 (88%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY+MT SQ+ VF EAG V SVE++Y+RVTDRSRGFAFVTMGS ++AKEAIRMFDGS
Sbjct: 251 GNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGS 310
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVPRGGER +MGPKIRSS R FVD+PYKIYAGNL W LTS+GLRDAF
Sbjct: 311 QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYR-GFVDSPYKIYAGNLSWRLTSEGLRDAF 369
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQR 538
D G+L AKVIY+R+ G+SRG+GF+SF+SAE A+SAL+AM+ VE+EGRPLRL+LAA R
Sbjct: 370 ADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLRLNLAAVR 428
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L F + V+S +++YDR +SRG+ F++ S +EA+ A+
Sbjct: 247 RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 306
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 307 FDGSQVGGRTVKVN 320
>ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Capsella rubella]
gi|482560889|gb|EOA25080.1| hypothetical protein
CARUB_v10018388mg [Capsella rubella]
Length = 342
Score = 272 bits (696), Expect = 8e-71
Identities = 133/204 (65%), Positives = 173/204 (84%), Gaps = 3/204 (1%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPYT+T S++ ++F EAG++ V+++Y++VTDRSRGF FVTMGS E+AKEAI+MF+ S
Sbjct: 125 GNLPYTITSSELSQIFGEAGKIVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNSS 184
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGERE+M KIR +NR ++VD+P+KIYAGNLGW+LTSQGL+DAF
Sbjct: 185 QIGGRTVKVNFPEVPRGGEREVMRTKIRDNNR-SYVDSPHKIYAGNLGWNLTSQGLKDAF 243
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQSGVL AKVIY+R+ G+SRG+GFISF SA++ QSAL MNGVE+EGR LRL+LA++R
Sbjct: 244 ADQSGVLGAKVIYERNTGRSRGFGFISFESADDVQSALSTMNGVEVEGRALRLNLASERE 303
Query: 542 --TVVAPKTQE-IHTDSIQEDATK 604
TV P +E + ++++E AT+
Sbjct: 304 KPTVSPPAVEEGLTEEAVEEGATE 327
Score = 58.5 bits (140), Expect = 2e-06
Identities = 23/74 (31%), Positives = 46/74 (62%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L F + ++ +++YD+ +SRG+GF++ S EEA+ A+
Sbjct: 121 RLYVGNLPYTITSSELSQIFGEAGKIVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 180
Query: 482 MNGVELEGRPLRLS 523
N ++ GR ++++
Sbjct: 181 FNSSQIGGRTVKVN 194
>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like isoform X1
[Glycine max]
Length = 314
Score = 271 bits (694), Expect = 1e-70
Identities = 135/189 (71%), Positives = 161/189 (85%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY++T S + E+F EAG VASVE++Y+RVTDRSRGFAFVTMG+ E AKEAIRMFDGS
Sbjct: 110 GNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRMFDGS 169
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVP+GGER +MG KIR+S R FVD+P+KIYAGNLGW LTSQGLR+AF
Sbjct: 170 QVGGRTVKVNFPEVPKGGERLVMGSKIRNSYR-GFVDSPHKIYAGNLGWGLTSQGLREAF 228
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
+Q GVLSAKVIY+RD G+SRG+GF+SF +AE AQ+ALD MNGVE++GRPLRL+LA R
Sbjct: 229 AEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEARA 288
Query: 542 TVVAPKTQE 568
P Q+
Sbjct: 289 PSSPPVIQK 297
>ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 271 bits (692), Expect = 2e-70
Identities = 134/189 (70%), Positives = 161/189 (85%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPY++T S++ E+F EAG VASVE++Y+RVTDRSRGFAFVTMGS E AKEAIRMFDGS
Sbjct: 113 GNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRMFDGS 172
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
Q+GGRTVKVNFPEVP+GGER +MG KI +S R FVD+P+KIYAGNLGW LTSQGLR+AF
Sbjct: 173 QVGGRTVKVNFPEVPKGGERLVMGSKILNSYR-GFVDSPHKIYAGNLGWGLTSQGLREAF 231
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
+Q GVLSAKVIY+RD G+SRG+GF+SF +AE A++ALD MNGVE++GRPLRL+LA R
Sbjct: 232 AEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQGRPLRLNLAEART 291
Query: 542 TVVAPKTQE 568
P Q+
Sbjct: 292 PSSPPVIQK 300
Score = 56.6 bits (135), Expect = 9e-06
Identities = 23/74 (31%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +T+ L + F + V S +++YDR +SRG+ F++ S E+A+ A+
Sbjct: 109 RLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRM 168
Query: 482 MNGVELEGRPLRLS 523
+G ++ GR ++++
Sbjct: 169 FDGSQVGGRTVKVN 182
>ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutrema salsugineum]
gi|557104928|gb|ESQ45262.1| hypothetical protein
EUTSA_v10010548mg [Eutrema salsugineum]
Length = 322
Score = 269 bits (687), Expect = 8e-70
Identities = 133/206 (64%), Positives = 166/206 (80%), Gaps = 2/206 (0%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPYT+T S++ E+F EAG V V+++Y++VTDRSRGF FVTMGS E+AKEAI+MF+ S
Sbjct: 116 GNLPYTITSSELSELFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNSS 175
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGERE+M KIR +NR ++VD+P+KIYAGNLGW LTSQGL+DAF
Sbjct: 176 QIGGRTVKVNFPEVPRGGEREVMRTKIRDTNR-SYVDSPHKIYAGNLGWSLTSQGLKDAF 234
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ GVL AKVIY+R+ G+SRG+GFISF SA++ QSAL AMNGVE+EGR LRL+LA++R
Sbjct: 235 ADQPGVLGAKVIYERNSGRSRGFGFISFESAQDVQSALSAMNGVEVEGRALRLNLASERA 294
Query: 542 TVVAPKTQE--IHTDSIQEDATKSTI 613
T P + +S++ S I
Sbjct: 295 TESVPSVAQGVTEEESVESSEVLSNI 320
Score = 60.5 bits (145), Expect = 6e-07
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L + F + V+ +++YD+ +SRG+GF++ S EEA+ A+
Sbjct: 112 RLYVGNLPYTITSSELSELFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 171
Query: 482 MNGVELEGRPLRLS 523
N ++ GR ++++
Sbjct: 172 FNSSQIGGRTVKVN 185
>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 318
Score = 265 bits (677), Expect = 1e-68
Identities = 129/194 (66%), Positives = 163/194 (84%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLP+++T SQ+ E+FAEAG V SVE++Y+RVTDRSRGFAFVTM S E+AKEAIRMFDGS
Sbjct: 113 GNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSVEEAKEAIRMFDGS 172
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGR+ KVNFPEVP+GGER +MG K+RS+ + FVD+P+KIYAGNLGW L SQ LRDAF
Sbjct: 173 QIGGRSAKVNFPEVPKGGERLVMGKKVRSAYK-GFVDSPHKIYAGNLGWGLNSQELRDAF 231
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
+Q G+L AKVIY+RD G+SRG+GF++F +AE ++AL+AMNGVE++GRPLRL+LA++R
Sbjct: 232 AEQPGLLGAKVIYERDNGRSRGFGFVTFETAENLEAALNAMNGVEVQGRPLRLNLASERT 291
Query: 542 TVVAPKTQEIHTDS 583
T P E +T S
Sbjct: 292 TSSPPPVVEENTKS 305
Score = 61.6 bits (148), Expect = 3e-07
Identities = 27/90 (30%), Positives = 51/90 (56%)
Frame = +2
Query: 254 PKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYG 433
P+ + D ++Y GNL + +TS L + F + V+S +++YDR +SRG+
Sbjct: 93 PQQEEEQKVTISDDAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFA 152
Query: 434 FISFSSAEEAQSALDAMNGVELEGRPLRLS 523
F++ S EEA+ A+ +G ++ GR +++
Sbjct: 153 FVTMKSVEEAKEAIRMFDGSQIGGRSAKVN 182
>ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|4886289|emb|CAB43448.1|
RNA-binding protein cp33 precursor [Arabidopsis
thaliana] gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240
[Arabidopsis thaliana] gi|18700226|gb|AAL77723.1|
AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|332645419|gb|AEE78940.1|
chloroplast RNA-binding protein 33 [Arabidopsis
thaliana]
Length = 329
Score = 265 bits (676), Expect = 2e-68
Identities = 132/210 (62%), Positives = 169/210 (80%), Gaps = 4/210 (1%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPYT+T S++ ++F EAG V V+++Y++VTDRSRGF FVTMGS E+AKEA++MF+ S
Sbjct: 121 GNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSS 180
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGE E+M KIR +NR ++VD+P+K+YAGNLGW+LTSQGL+DAF
Sbjct: 181 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNR-SYVDSPHKVYAGNLGWNLTSQGLKDAF 239
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ GVL AKVIY+R+ G+SRG+GFISF SAE QSAL MNGVE+EGR LRL+LA++R
Sbjct: 240 GDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASERE 299
Query: 542 --TVVAPKTQEIHTD--SIQEDATKSTIGA 619
TV P +E T+ S++ + S + A
Sbjct: 300 KPTVSPPSVEEGETEEASLESNEVLSNVSA 329
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/74 (32%), Positives = 46/74 (62%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L F + V+ +++YD+ +SRG+GF++ S EEA+ A+
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176
Query: 482 MNGVELEGRPLRLS 523
N ++ GR ++++
Sbjct: 177 FNSSQIGGRTVKVN 190
>dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 265 bits (676), Expect = 2e-68
Identities = 132/210 (62%), Positives = 169/210 (80%), Gaps = 4/210 (1%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPYT+T S++ ++F EAG V V+++Y++VTDRSRGF FVTMGS E+AKEA++MF+ S
Sbjct: 113 GNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSS 172
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVNFPEVPRGGE E+M KIR +NR ++VD+P+K+YAGNLGW+LTSQGL+DAF
Sbjct: 173 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNR-SYVDSPHKVYAGNLGWNLTSQGLKDAF 231
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ GVL AKVIY+R+ G+SRG+GFISF SAE QSAL MNGVE+EGR LRL+LA++R
Sbjct: 232 GDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASERE 291
Query: 542 --TVVAPKTQEIHTD--SIQEDATKSTIGA 619
TV P +E T+ S++ + S + A
Sbjct: 292 KPTVSPPSVEEGETEEASLESNEVLSNVSA 321
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/75 (32%), Positives = 47/75 (62%)
Frame = +2
Query: 299 YKIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALD 478
+++Y GNL + +TS L F + V+ +++YD+ +SRG+GF++ S EEA+ A+
Sbjct: 108 WRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQ 167
Query: 479 AMNGVELEGRPLRLS 523
N ++ GR ++++
Sbjct: 168 MFNSSQIGGRTVKVN 182
>ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33
[Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 264 bits (675), Expect = 2e-68
Identities = 130/203 (64%), Positives = 167/203 (82%), Gaps = 2/203 (0%)
Frame = +2
Query: 2 GNLPYTMTPSQIKEVFAEAGRVASVEVIYNRVTDRSRGFAFVTMGSTEQAKEAIRMFDGS 181
GNLPYT+T S++ ++F EAG V V+++Y++VTDRSRGF FVTMG+ E+AKEAI+MF+ S
Sbjct: 122 GNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSS 181
Query: 182 QIGGRTVKVNFPEVPRGGERELMGPKIRSSNRQAFVDTPYKIYAGNLGWDLTSQGLRDAF 361
QIGGRTVKVN PEVPRGGERE+M KIR +NR ++VD+P+KIYAGNLGW+LTSQGL+DAF
Sbjct: 182 QIGGRTVKVNLPEVPRGGEREVMRTKIRDNNR-SYVDSPHKIYAGNLGWNLTSQGLKDAF 240
Query: 362 TDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDAMNGVELEGRPLRLSLAAQRN 541
DQ GVL AKVIY+R+ G+SRG+GFISF SAE+ QSAL MNGVE+EGR LRL+LA++R
Sbjct: 241 GDQPGVLGAKVIYERNTGRSRGFGFISFESAEDVQSALATMNGVEVEGRALRLNLASERE 300
Query: 542 --TVVAPKTQEIHTDSIQEDATK 604
TV P +E T + ++++
Sbjct: 301 RPTVSPPSVEEGETKDVSLESSE 323
Score = 60.1 bits (144), Expect = 8e-07
Identities = 24/75 (32%), Positives = 47/75 (62%)
Frame = +2
Query: 302 KIYAGNLGWDLTSQGLRDAFTDQSGVLSAKVIYDRDFGKSRGYGFISFSSAEEAQSALDA 481
++Y GNL + +TS L F + V+ +++YD+ +SRG+GF++ + EEA+ A+
Sbjct: 118 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 177
Query: 482 MNGVELEGRPLRLSL 526
N ++ GR ++++L
Sbjct: 178 FNSSQIGGRTVKVNL 192