BLASTX nr result

ID: Cocculus22_contig00015583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00015583
         (289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
emb|CBI25049.3| unnamed protein product [Vitis vinifera]               63   4e-08
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]    63   4e-08
ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citr...    60   4e-07

>ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Citrus sinensis]
          Length = 993

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
 Frame = -3

Query: 281 HPLWFPCSRKARMIMALHHCC-----SSILTHSPLV-KPPKNPPLSTSKVSQNPVHLHSL 120
           H L FPC+  + M  ++  CC      S LTH P+V K    P L   K  Q P++   L
Sbjct: 24  HRLRFPCTYSSVMATSISRCCFSPSSGSALTHYPVVGKAHVTPSLKAPKFPQKPINTPCL 83

Query: 119 KEKCKQGQLKEAFISFAN-FLSQNPSPVTLDEAYSSILDL 3
           +E CKQG LK+AF S +N F + N   +  DEAY+ +LDL
Sbjct: 84  REFCKQGNLKDAFRSLSNLFTNHNVFTIRPDEAYALVLDL 123


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 HSPLVKPPKNPPLSTSKVSQNPVHLHSLKEKCKQGQLKEAFISFAN-FLSQNPSPVTLDE 27
           H  L K  +NPPL  SK    PV   SL+E CK+G + EAF S  + F +Q+PS  +LDE
Sbjct: 56  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 115

Query: 26  AYSSILDL 3
           AYSS+L+L
Sbjct: 116 AYSSVLEL 123


>emb|CBI25049.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 HSPLVKPPKNPPLSTSKVSQNPVHLHSLKEKCKQGQLKEAFISFAN-FLSQNPSPVTLDE 27
           H  L K  +NPPL  SK    PV   SL+E CK+G + EAF S  + F +Q+PS  +LDE
Sbjct: 13  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 72

Query: 26  AYSSILDL 3
           AYSS+L+L
Sbjct: 73  AYSSVLEL 80


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 HSPLVKPPKNPPLSTSKVSQNPVHLHSLKEKCKQGQLKEAFISFAN-FLSQNPSPVTLDE 27
           H  L K  +NPPL  SK    PV   SL+E CK+G + EAF S  + F +Q+PS  +LDE
Sbjct: 20  HPVLKKIHQNPPLKISKFPLKPVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDE 79

Query: 26  AYSSILDL 3
           AYSS+L+L
Sbjct: 80  AYSSVLEL 87


>ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citrus clementina]
           gi|557546230|gb|ESR57208.1| hypothetical protein
           CICLE_v10024388mg [Citrus clementina]
          Length = 958

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
 Frame = -3

Query: 245 MIMALHHCC-----SSILTHSPLV-KPPKNPPLSTSKVSQNPVHLHSLKEKCKQGQLKEA 84
           M  ++  CC      S LTH P+V K    P L   K  Q P++   L+E CKQG LK+A
Sbjct: 1   MATSISRCCFSPSSGSALTHYPVVGKAHVTPSLKAPKFPQKPINTPCLREFCKQGNLKDA 60

Query: 83  FISFAN-FLSQNPSPVTLDEAYSSILDL 3
           F S +N F + N   +  DEAY+ +LDL
Sbjct: 61  FRSLSNLFTNHNVFTIRPDEAYALVLDL 88


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