BLASTX nr result
ID: Cocculus22_contig00015562
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00015562
(712 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321881.2| hypothetical protein POPTR_0015s13760g [Popu... 64 5e-08
ref|XP_004953439.1| PREDICTED: zinc finger CCCH domain-containin... 63 9e-08
ref|XP_004513686.1| PREDICTED: zinc finger CCCH domain-containin... 63 1e-07
ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 61 3e-07
ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin... 61 3e-07
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin... 61 3e-07
emb|CAN69868.1| hypothetical protein VITISV_020240 [Vitis vinifera] 61 3e-07
ref|XP_007152351.1| hypothetical protein PHAVU_004G122600g [Phas... 60 6e-07
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric... 60 6e-07
ref|NP_194274.2| zinc finger WD40 repeat protein 1 [Arabidopsis ... 60 7e-07
ref|XP_006283770.1| hypothetical protein CARUB_v10004856mg [Caps... 60 7e-07
ref|XP_002867609.1| hypothetical protein ARALYDRAFT_329122 [Arab... 60 7e-07
emb|CAA18182.1| putative protein [Arabidopsis thaliana] 60 7e-07
ref|XP_006413303.1| hypothetical protein EUTSA_v10025269mg [Eutr... 60 9e-07
ref|XP_003634051.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 60 9e-07
gb|AFW72792.1| hypothetical protein ZEAMMB73_250148 [Zea mays] 59 1e-06
ref|NP_001131242.1| uncharacterized protein LOC100192554 [Zea ma... 59 1e-06
ref|XP_006490309.1| PREDICTED: zinc finger CCCH domain-containin... 59 2e-06
ref|XP_006421832.1| hypothetical protein CICLE_v10005002mg [Citr... 59 2e-06
ref|XP_002454483.1| hypothetical protein SORBIDRAFT_04g031930 [S... 59 2e-06
>ref|XP_002321881.2| hypothetical protein POPTR_0015s13760g [Populus trichocarpa]
gi|550322663|gb|EEF06008.2| hypothetical protein
POPTR_0015s13760g [Populus trichocarpa]
Length = 454
Score = 63.9 bits (154), Expect = 5e-08
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = -2
Query: 189 QSQKVCKYWRAGRCNRYPCPYLHTEL---PENS--NNGTEPKSPHLKNVSASHTTTGRKP 25
Q+QKVC +WRAGRCNR+PCP+LH EL P ++ N G K + N S+S + +GR+
Sbjct: 38 QNQKVCYHWRAGRCNRFPCPFLHRELSAPPTHAAVNGGVGAKRGFVGNDSSSSSFSGRRG 97
Query: 24 NAHLNSN 4
N N N
Sbjct: 98 NNGTNGN 104
>ref|XP_004953439.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
[Setaria italica]
Length = 428
Score = 63.2 bits (152), Expect = 9e-08
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = -2
Query: 180 KVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLKNVSASHTTTGRKPNAH 16
KVC YWRAGRCNR+PCPYLH+ELPE + P P NV + + GR H
Sbjct: 32 KVCNYWRAGRCNRFPCPYLHSELPEAAAPPKRPSGPG-GNVWRNPNSGGRGGGGH 85
>ref|XP_004513686.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Cicer arietinum]
Length = 437
Score = 62.8 bits (151), Expect = 1e-07
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = -2
Query: 189 QSQKVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLKNVSASHTTTGRKPNAHLN 10
++QKVC W+AG+C+RYPCP+LH+ELP + NG K P+ ++S +GR+ A N
Sbjct: 23 KNQKVCFQWQAGKCSRYPCPFLHSELPSFNGNGAPSKRPYGSGENSSF--SGRRGGASFN 80
Query: 9 S 7
+
Sbjct: 81 T 81
>ref|XP_003634083.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 48-like [Vitis vinifera]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = -2
Query: 216 HGNRRV--------QAVQSQKVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLKN 61
HGN+RV + + QKVC +WRAGRCN++PCPYLH ELP E P + N
Sbjct: 6 HGNKRVFQRLGASNDSGKQQKVCYHWRAGRCNKFPCPYLHRELPAPP---PEQYQPFISN 62
Query: 60 VSASHTTTGRKPNAHLNSNQ 1
S+S ++PN ++ ++
Sbjct: 63 GSSS-----KRPNQGVHDDR 77
>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Glycine max]
Length = 427
Score = 61.2 bits (147), Expect = 3e-07
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Frame = -2
Query: 228 MAVVHGNRRVQA-----VQSQKVCKYWRAGRCNRYPCPYLHTELPENSN--NGTEPK 79
M V GN+RV + QKVC +W+AG+CNRYPCP+LH+ELP NS+ NG K
Sbjct: 1 MDVDGGNKRVYNRLGGDAKHQKVCFHWQAGKCNRYPCPFLHSELPANSHHANGASSK 57
>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Glycine max]
Length = 426
Score = 61.2 bits (147), Expect = 3e-07
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Frame = -2
Query: 228 MAVVHGNRRVQA-----VQSQKVCKYWRAGRCNRYPCPYLHTELPENSN--NGTEPK 79
M V GN+RV + QKVC +W+AG+CNRYPCP+LH+E P NS+ NGT K
Sbjct: 1 MDVDGGNKRVYNRLGGDAKHQKVCYHWQAGKCNRYPCPFLHSESPANSHHANGTSSK 57
>emb|CAN69868.1| hypothetical protein VITISV_020240 [Vitis vinifera]
Length = 210
Score = 61.2 bits (147), Expect = 3e-07
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = -2
Query: 216 HGNRRV--------QAVQSQKVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLKN 61
HGN+RV + + QKVC +WRAGRCN++PCPYLH ELP E P + N
Sbjct: 6 HGNKRVFQRLGASNDSGKQQKVCYHWRAGRCNKFPCPYLHRELPAPP---PEQYQPFISN 62
Query: 60 VSASHTTTGRKPNAHLNSNQ 1
S+S ++PN ++ ++
Sbjct: 63 GSSS-----KRPNQGVHDDR 77
>ref|XP_007152351.1| hypothetical protein PHAVU_004G122600g [Phaseolus vulgaris]
gi|561025660|gb|ESW24345.1| hypothetical protein
PHAVU_004G122600g [Phaseolus vulgaris]
Length = 424
Score = 60.5 bits (145), Expect = 6e-07
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -2
Query: 210 NRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELPENSN-NGTEPKSPH 70
NR + QKVC +W+AG+CNRYPCP+LH+ELP +S+ NG K H
Sbjct: 12 NRLGGDAKHQKVCFHWQAGKCNRYPCPFLHSELPASSHANGASSKRAH 59
>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223549969|gb|EEF51456.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 445
Score = 60.5 bits (145), Expect = 6e-07
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Frame = -2
Query: 189 QSQKVCKYWRAGRCNRYPCPYLHTELP----------ENSNNGTEPKSPHLKNVSASHTT 40
+ QKVC +WRAGRCNR+PCPYLH ELP +S+N P N S
Sbjct: 32 RQQKVCHHWRAGRCNRFPCPYLHRELPPPPPPHGSNGHSSSNNNAPSKRGFSNDSGFSGP 91
Query: 39 TGRKPNAHLNS 7
+G + + + N+
Sbjct: 92 SGSRRSGNFNN 102
>ref|NP_194274.2| zinc finger WD40 repeat protein 1 [Arabidopsis thaliana]
gi|75334157|sp|Q9FNZ2.1|C3H48_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 48; Short=AtC3H48;
AltName: Full=Zinc finger CCCH domain and WD40
repeat-containing protein 1 gi|12057164|emb|CAC19847.1|
zfwd1 protein [Arabidopsis thaliana]
gi|109946599|gb|ABG48478.1| At4g25440 [Arabidopsis
thaliana] gi|332659660|gb|AEE85060.1| zinc finger WD40
repeat protein 1 [Arabidopsis thaliana]
Length = 430
Score = 60.1 bits (144), Expect = 7e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 213 GNRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELP 109
G+ R +QKVC +WRAGRCNRYPCPYLH ELP
Sbjct: 19 GSNRPTTDSNQKVCFHWRAGRCNRYPCPYLHRELP 53
>ref|XP_006283770.1| hypothetical protein CARUB_v10004856mg [Capsella rubella]
gi|482552475|gb|EOA16668.1| hypothetical protein
CARUB_v10004856mg [Capsella rubella]
Length = 431
Score = 60.1 bits (144), Expect = 7e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 213 GNRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELP 109
G+ R +QKVC +WRAGRCNRYPCPYLH ELP
Sbjct: 19 GSNRPPTDSNQKVCFHWRAGRCNRYPCPYLHRELP 53
>ref|XP_002867609.1| hypothetical protein ARALYDRAFT_329122 [Arabidopsis lyrata subsp.
lyrata] gi|297313445|gb|EFH43868.1| hypothetical protein
ARALYDRAFT_329122 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 60.1 bits (144), Expect = 7e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 213 GNRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELP 109
G+ R +QKVC +WRAGRCNRYPCPYLH ELP
Sbjct: 19 GSNRPTTDSNQKVCFHWRAGRCNRYPCPYLHRELP 53
>emb|CAA18182.1| putative protein [Arabidopsis thaliana]
Length = 668
Score = 60.1 bits (144), Expect = 7e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 213 GNRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELP 109
G+ R +QKVC +WRAGRCNRYPCPYLH ELP
Sbjct: 19 GSNRPTTDSNQKVCFHWRAGRCNRYPCPYLHRELP 53
>ref|XP_006413303.1| hypothetical protein EUTSA_v10025269mg [Eutrema salsugineum]
gi|557114473|gb|ESQ54756.1| hypothetical protein
EUTSA_v10025269mg [Eutrema salsugineum]
Length = 428
Score = 59.7 bits (143), Expect = 9e-07
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2
Query: 213 GNRRVQAVQSQKVCKYWRAGRCNRYPCPYLHTELP 109
G+ R +QKVC +WRAGRCNRYPCPYLH+E P
Sbjct: 18 GSNRPTTESNQKVCFHWRAGRCNRYPCPYLHSEFP 52
>ref|XP_003634051.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 48-like [Vitis vinifera]
Length = 274
Score = 59.7 bits (143), Expect = 9e-07
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Frame = -2
Query: 216 HGNRRV--------QAVQSQKVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLKN 61
HGN+RV + + QKVC WRAGRCN++PCPYLH ELP E P + N
Sbjct: 6 HGNKRVFQRLGASNDSGKQQKVCYRWRAGRCNKFPCPYLHRELPAPP---PEQYQPFISN 62
Query: 60 VSASHTTTGRKPNAHLNSNQ 1
S+S ++PN ++ ++
Sbjct: 63 GSSS-----KRPNQGVHDDR 77
>gb|AFW72792.1| hypothetical protein ZEAMMB73_250148 [Zea mays]
Length = 350
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 180 KVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLK--NVSASHTTTGRKPNAH 16
KVC YWRAGRCNR+PCP+LH+ELPE PK P NV + T GR H
Sbjct: 32 KVCNYWRAGRCNRFPCPFLHSELPE----AAPPKRPTGPGGNVWRNPNTGGRGGGHH 84
>ref|NP_001131242.1| uncharacterized protein LOC100192554 [Zea mays]
gi|194690974|gb|ACF79571.1| unknown [Zea mays]
gi|195649475|gb|ACG44205.1| nucleic acid binding protein
[Zea mays] gi|407232732|gb|AFT82708.1| C3H34 C3H type
transcription factor, partial [Zea mays subsp. mays]
gi|413938240|gb|AFW72791.1| nucleic acid binding protein
[Zea mays]
Length = 427
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 180 KVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSPHLK--NVSASHTTTGRKPNAH 16
KVC YWRAGRCNR+PCP+LH+ELPE PK P NV + T GR H
Sbjct: 32 KVCNYWRAGRCNRFPCPFLHSELPE----AAPPKRPTGPGGNVWRNPNTGGRGGGHH 84
>ref|XP_006490309.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
[Citrus sinensis]
Length = 434
Score = 58.9 bits (141), Expect = 2e-06
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = -2
Query: 183 QKVCKYWRAGRCNRYPCPYLHTEL---PENSNNGTEPKSPHLKNVSASHTTTGRKPNAHL 13
QKVC YWRAG+CNR+PCPYLH EL P + NG K ++ T GR N +
Sbjct: 35 QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAK-------RFANNTWGRNNNFNN 87
Query: 12 NSN 4
+SN
Sbjct: 88 HSN 90
>ref|XP_006421832.1| hypothetical protein CICLE_v10005002mg [Citrus clementina]
gi|557523705|gb|ESR35072.1| hypothetical protein
CICLE_v10005002mg [Citrus clementina]
Length = 434
Score = 58.9 bits (141), Expect = 2e-06
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = -2
Query: 183 QKVCKYWRAGRCNRYPCPYLHTEL---PENSNNGTEPKSPHLKNVSASHTTTGRKPNAHL 13
QKVC YWRAG+CNR+PCPYLH EL P + NG K ++ T GR N +
Sbjct: 35 QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAK-------RFANNTWGRNNNFNN 87
Query: 12 NSN 4
+SN
Sbjct: 88 HSN 90
>ref|XP_002454483.1| hypothetical protein SORBIDRAFT_04g031930 [Sorghum bicolor]
gi|241934314|gb|EES07459.1| hypothetical protein
SORBIDRAFT_04g031930 [Sorghum bicolor]
Length = 429
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = -2
Query: 180 KVCKYWRAGRCNRYPCPYLHTELPENSNNGTEPKSP 73
KVC YWRAGRCNR+PCP+LH+ELPE PK P
Sbjct: 32 KVCNYWRAGRCNRFPCPFLHSELPE----AAPPKRP 63