BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00014968
         (777 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    68   3e-09
ref|XP_006574288.1| PREDICTED: uncharacterized protein LOC102661...    64   5e-08
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   2e-07
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    61   4e-07
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        60   7e-07
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    59   1e-06
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    59   1e-06
ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668...    59   3e-06
ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667...    58   3e-06
ref|XP_006591584.1| PREDICTED: uncharacterized protein LOC102666...    57   1e-05

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 35/126 (27%), Positives = 63/126 (50%)
 Frame = +2

Query: 377 LMNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHA 556
           +++  +WN+ GFN+  +R    K   + K  F +ILET+      R  L  +F  W    
Sbjct: 1   MIDTFSWNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVC 60

Query: 557 NHTKHKLGRIWIM*SDDIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASL 736
           N+    LGRIW++    + VT+++   Q +   V +  +  + ++  VYA+N    R  L
Sbjct: 61  NYEFAALGRIWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRL 120

Query: 737 WRDLQV 754
           W +L++
Sbjct: 121 WSELEL 126


>ref|XP_006574288.1| PREDICTED: uncharacterized protein LOC102661053 [Glycine max]
          Length = 331

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +2

Query: 380 MNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHAN 559
           M + +WNI GFN P K   +   L   ++   A+LETK  +  +   + + F  W+   N
Sbjct: 1   MIIASWNIRGFNLPLKHHAMQNFLRCKEINVMAVLETKLNKASVEEIMRRKFSDWHFTHN 60

Query: 560 HTKHKLGRIWIM*SDD-IRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASL 736
            T H  GRI+I+   D I  +++ + +Q +   +  K    +L +  +Y L+S + R SL
Sbjct: 61  FTSHNAGRIFILWKQDKIHFSVLESNAQLIHCAINCKTNSKRLQVSFIYDLHSIMARRSL 120

Query: 737 WRDL 748
           W +L
Sbjct: 121 WMNL 124


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
 Frame = +2

Query: 380 MNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHAN 559
           M  V+WN+ G N P K  E+   L  HK+  CA+LET+           K  K W    N
Sbjct: 1   MLCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNN 60

Query: 560 HTKHKLGRIWIM*SDD-IRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASL 736
           ++     RIWI      + VT+ +   Q MV    I+D   KL +++VY L++   R SL
Sbjct: 61  YSHSARERIWIGWRPAWVNVTLTHTQEQLMVCD--IQDQSHKLKMVAVYGLHTIADRKSL 118

Query: 737 WRDLQVWVDQ 766
           W  L   V Q
Sbjct: 119 WSGLLQCVQQ 128


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 36/125 (28%), Positives = 54/125 (43%)
 Frame = +2

Query: 380 MNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHAN 559
           M +  WNI G NS N++  +   ++ + +     LET   +      L      W   +N
Sbjct: 1   MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60

Query: 560 HTKHKLGRIWIM*SDDIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASLW 739
           +   +LGRIWI+    I V +     Q M   + I  L     +  VY  NS + R SLW
Sbjct: 61  YCCSELGRIWIVWDPSISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLW 120

Query: 740 RDLQV 754
            D+ V
Sbjct: 121 EDILV 125


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 34/122 (27%), Positives = 58/122 (47%)
 Frame = +2

Query: 383 NLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHANH 562
           NL  WNI GFN+ + R    K +  +K  F  ++ET   +   R ++      W+   N+
Sbjct: 4   NLFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENY 63

Query: 563 TKHKLGRIWIM*SDDIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASLWR 742
               LG+IW+M    ++V +V    Q +  +V++      +I+  VYA N    R  LW 
Sbjct: 64  AFSDLGKIWVMWDPSVQVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKELWI 123

Query: 743 DL 748
           ++
Sbjct: 124 EI 125


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/129 (24%), Positives = 61/129 (47%)
 Frame = +2

Query: 362 CSKLFLMNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKV 541
           C+KLF      WN+ GFN  + R    K   ++K  F  ++ET   +   + +++     
Sbjct: 2   CTKLF-----CWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPG 56

Query: 542 WNHHANHTKHKLGRIWIM*SDDIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSI 721
           W+   N+    LG+IW++    ++V ++    Q +  ++++ D     ++  VYA N   
Sbjct: 57  WSFVENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEG 116

Query: 722 RRASLWRDL 748
            R  LW +L
Sbjct: 117 TRKELWNEL 125


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/129 (24%), Positives = 61/129 (47%)
 Frame = +2

Query: 362 CSKLFLMNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKV 541
           C+KLF      WN+ GFN  + R    K   ++K  F  ++ET   +   + +++     
Sbjct: 2   CTKLF-----CWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPG 56

Query: 542 WNHHANHTKHKLGRIWIM*SDDIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSI 721
           W+   N+    LG+IW++    ++V ++    Q +  ++++ D     ++  VYA N   
Sbjct: 57  WSFVENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEG 116

Query: 722 RRASLWRDL 748
            R  LW +L
Sbjct: 117 TRKELWNEL 125


>ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668030 [Glycine max]
          Length = 411

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
 Frame = +2

Query: 380 MNLVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHAN 559
           M + +WNI GFN P K   +   L   ++    +LETK  +  +   + + F  W+   N
Sbjct: 1   MIIASWNIRGFNLPLKHHAMQSFLRCKEINVMVVLETKLNKASVEEIMRRKFGDWHFTHN 60

Query: 560 HTKHKLGRIWIM*SDD-IRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASL 736
            T H   RI I+   D I ++++ + +Q +   +  K    +  +  +Y L+S + R SL
Sbjct: 61  FTSHNASRILILWKQDKIHLSVLESNAQLIHCAIDCKTTAKRFQVSFIYGLHSIMARRSL 120

Query: 737 WRDL 748
           W +L
Sbjct: 121 WINL 124


>ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667760 [Glycine max]
          Length = 331

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
 Frame = +2

Query: 386 LVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHANHT 565
           +V+WN+ G N   +  E+   L    V   A+LET+      +    K    WN+  N+ 
Sbjct: 1   MVSWNVRGINKVARNKEVSSYLHSFNVPIVALLETRVKMHNAKKVRNKIGGSWNYMDNYD 60

Query: 566 KHKLGRIWIM*SD-DIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASLWR 742
           +H+ GRIW++    ++ + ++    Q +  ++   D   K + + +YA N   RR  LW 
Sbjct: 61  RHENGRIWLLWDHREVNLKLIQTDEQFIHVELYSLDQSLKFVALVIYAFNQLDRRKELWN 120

Query: 743 DLQ 751
            ++
Sbjct: 121 KIE 123


>ref|XP_006591584.1| PREDICTED: uncharacterized protein LOC102666004 [Glycine max]
          Length = 314

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
 Frame = +2

Query: 386 LVAWNIMGFNSPNKRLELGKLLSIHKVAFCAILETK*IRVILRPYLTKNFKVWNHHANHT 565
           +V+WN+ G N   +  E+   L    V   A+LET+           K    WN+  N+ 
Sbjct: 1   MVSWNVRGINKVARNKEVSSYLRTFHVPIVALLETRVKMKNANRIRNKIGGRWNYMDNYD 60

Query: 566 KHKLGRIWIM*SD-DIRVTIVNNYSQEMVAKVIIKDLGWKLIIISVYALNSSIRRASLWR 742
           KH+ GRIW++    ++ + ++    Q +  +V   D     + + +YA N   RR  LW 
Sbjct: 61  KHENGRIWLLWDHREVNLKLIQTGEQFIHVEVYSLDQSLMYVALVIYAFNQLDRRKELWN 120

Query: 743 DLQ 751
            ++
Sbjct: 121 KIE 123