BLASTX nr result
ID: Cocculus22_contig00014788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00014788
(807 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28156.3| unnamed protein product [Vitis vinifera] 103 6e-20
ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267... 81 5e-13
ref|XP_006475784.1| PREDICTED: uncharacterized protein LOC102613... 79 2e-12
emb|CBI21002.3| unnamed protein product [Vitis vinifera] 78 3e-12
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264... 78 3e-12
ref|XP_006451001.1| hypothetical protein CICLE_v10008447mg [Citr... 77 6e-12
ref|XP_006451000.1| hypothetical protein CICLE_v10008447mg [Citr... 77 6e-12
ref|XP_006371734.1| hypothetical protein POPTR_0018s01440g [Popu... 75 3e-11
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu... 70 1e-09
ref|XP_007013343.1| RNA binding protein, putative isoform 3 [The... 64 5e-08
ref|XP_007013341.1| RNA binding protein, putative isoform 1 [The... 64 5e-08
gb|EXB76290.1| hypothetical protein L484_025648 [Morus notabilis] 59 3e-06
>emb|CBI28156.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 103 bits (258), Expect = 6e-20
Identities = 64/138 (46%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W DD+W V+GK G +D + P T QNS+ Q+ D +MK+ D F V+
Sbjct: 120 VRQSWQDDKWIVIGKSSGTFEDRKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVK 179
Query: 183 DNVVL-ESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVE-VGRRHRIVPVKTSSI-KK 353
+N ESR+ SSR LKRG + S E G+A+K R E GR HR V S + +K
Sbjct: 180 NNADFPESRIASSRTLKRGSPFGYSQVEAYAGSAQKFRLTEKEGRLHRAVAANASLLPEK 239
Query: 354 GQSWRLVHLASKGQKMML 407
GQS RLVHLASK KMML
Sbjct: 240 GQSMRLVHLASKCLKMML 257
>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
Length = 415
Score = 80.9 bits (198), Expect = 5e-13
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W DD+W V+GK G +D + P T QNS+ Q+ D +MK+ D F V+
Sbjct: 120 VRQSWQDDKWIVIGKSSGTFEDRKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVK 179
Query: 183 DNVVL-ESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVE-VGRRHRIVPVKTS 341
+N ESR+ SSR LKRG + S E G+A+K R E GR HR V S
Sbjct: 180 NNADFPESRIASSRTLKRGSPFGYSQVEAYAGSAQKFRLTEKEGRLHRAVAANAS 234
>ref|XP_006475784.1| PREDICTED: uncharacterized protein LOC102613557 [Citrus sinensis]
Length = 416
Score = 79.0 bits (193), Expect = 2e-12
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W++D+W VVG+G +D K TL+ QNS+ Q + ++ +H D+ FPV+
Sbjct: 120 VRQSWLEDKWIVVGEGSSSREDGKYYKSPTLKYCQNSSFQTKKSNTRINLHTKDESFPVK 179
Query: 183 DNVVLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEV-GRRHRIVPVKTS 341
+ V + S +VSSR LKRG SY S E G A K RAV+ GR R++ S
Sbjct: 180 NRVNIISNIVSSRILKRGSSYHYSEVE-GTGTAEKFRAVDKDGRLLRVLAANRS 232
>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 78.2 bits (191), Expect = 3e-12
Identities = 44/116 (37%), Positives = 66/116 (56%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQAW+DD+W V+G+G +D NK T +Q + Q+P D K+K+ GD +F
Sbjct: 120 VRQAWIDDKWVVIGQGSITFEDVRVNKLLTSNCHQKMSFQVPQADMKLKLQAGDDFFQKH 179
Query: 183 DNVVLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEVGRRHRIVPVKTSSIK 350
+ +S MVSS+ LKR Y S E G +K+RA+E G R R++ +S ++
Sbjct: 180 AD-FQDSPMVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGGRQRVITGYSSPLR 234
>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
Length = 440
Score = 78.2 bits (191), Expect = 3e-12
Identities = 44/116 (37%), Positives = 66/116 (56%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQAW+DD+W V+G+G +D NK T +Q + Q+P D K+K+ GD +F
Sbjct: 120 VRQAWIDDKWVVIGQGSITFEDVRVNKLLTSNCHQKMSFQVPQADMKLKLQAGDDFFQKH 179
Query: 183 DNVVLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEVGRRHRIVPVKTSSIK 350
+ +S MVSS+ LKR Y S E G +K+RA+E G R R++ +S ++
Sbjct: 180 AD-FQDSPMVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGGRQRVITGYSSPLR 234
>ref|XP_006451001.1| hypothetical protein CICLE_v10008447mg [Citrus clementina]
gi|557554227|gb|ESR64241.1| hypothetical protein
CICLE_v10008447mg [Citrus clementina]
Length = 372
Score = 77.4 bits (189), Expect = 6e-12
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W++D+W VVG+G +D K TL+ QNS+ Q + ++ +H D+ FPV+
Sbjct: 120 VRQSWLEDKWIVVGEGSSSREDGKYYKSPTLKYCQNSSFQTKKLNTRINLHTKDESFPVK 179
Query: 183 DNVVLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEV-GRRHRIVPVKTS 341
+ V + S +VSSR LKRG SY S E G A K RAV+ GR R++ S
Sbjct: 180 NRVNIISNIVSSRILKRGSSYHYSEVE-GTGTAEKFRAVDKDGRLLRVLAANRS 232
>ref|XP_006451000.1| hypothetical protein CICLE_v10008447mg [Citrus clementina]
gi|567917992|ref|XP_006451002.1| hypothetical protein
CICLE_v10008447mg [Citrus clementina]
gi|557554226|gb|ESR64240.1| hypothetical protein
CICLE_v10008447mg [Citrus clementina]
gi|557554228|gb|ESR64242.1| hypothetical protein
CICLE_v10008447mg [Citrus clementina]
Length = 415
Score = 77.4 bits (189), Expect = 6e-12
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W++D+W VVG+G +D K TL+ QNS+ Q + ++ +H D+ FPV+
Sbjct: 120 VRQSWLEDKWIVVGEGSSSREDGKYYKSPTLKYCQNSSFQTKKLNTRINLHTKDESFPVK 179
Query: 183 DNVVLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEV-GRRHRIVPVKTS 341
+ V + S +VSSR LKRG SY S E G A K RAV+ GR R++ S
Sbjct: 180 NRVNIISNIVSSRILKRGSSYHYSEVE-GTGTAEKFRAVDKDGRLLRVLAANRS 232
>ref|XP_006371734.1| hypothetical protein POPTR_0018s01440g [Populus trichocarpa]
gi|550317789|gb|ERP49531.1| hypothetical protein
POPTR_0018s01440g [Populus trichocarpa]
Length = 300
Score = 75.1 bits (183), Expect = 3e-11
Identities = 53/157 (33%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
+RQ W D +W +GKG G ++ NKPS YQ + M K KV + +E
Sbjct: 130 MRQLWQDGRWVEIGKGSGSFENEKLNKPSVFSCYQKKRSLMQQASKKRKVQARETCLAIE 189
Query: 183 DNV-VLESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVE---VGRRHRIVPVKTSSIK 350
N ES +S+R KR + ++ E K+RA+E GRR I +S +
Sbjct: 190 HNFGFQESCAMSARTSKRASPFWATHFESCNEKVDKMRAIEKQSEGRR-VISGYPSSFLT 248
Query: 351 KGQSWRLVHLASKGQKMML----LDSFHFRRAISLLC 449
KG SWR + ASKG KMML SF + + +C
Sbjct: 249 KGHSWRHANFASKGLKMMLGTCGSPSFFWLNELGAMC 285
>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
gi|223536228|gb|EEF37880.1| RNA binding protein,
putative [Ricinus communis]
Length = 383
Score = 69.7 bits (169), Expect = 1e-09
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 6 RQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVED 185
RQ+W D +W V+GKG G +D ++ TL+ QNS N + + ++KV F + +
Sbjct: 95 RQSWQDGKWIVIGKGSGSYEDTKHDENVTLKCKQNSQNNVQMRSTRLKVGS----FRMRN 150
Query: 186 NVVLE-SRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVE-VGRRHRIVPVKTSS 344
L+ S +VS R LKRGP E GAA+K RAVE GR HR++ SS
Sbjct: 151 KETLKGSNIVSCRTLKRGPC-GYKQVETYDGAAQKFRAVEKEGRLHRVLAANQSS 204
>ref|XP_007013343.1| RNA binding protein, putative isoform 3 [Theobroma cacao]
gi|508783706|gb|EOY30962.1| RNA binding protein,
putative isoform 3 [Theobroma cacao]
Length = 289
Score = 64.3 bits (155), Expect = 5e-08
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W DD+W V+GKG G C+D + TLR QNS++Q H + PV
Sbjct: 72 VRQSWQDDEWVVIGKGSGSCEDGKYGENYTLRYNQNSSSQFQNTTRMTNRHLKGECGPVN 131
Query: 183 DNVVLE-SRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEV-GRRHRIVPVKTS 341
V + S + SS+ LK G S E GA +K RAVE GR +R+V S
Sbjct: 132 KKVNYQVSVIASSKTLKIGC---YSQTEAFAGARQKFRAVEKDGRLYRLVAANPS 183
>ref|XP_007013341.1| RNA binding protein, putative isoform 1 [Theobroma cacao]
gi|590577836|ref|XP_007013342.1| RNA binding protein,
putative isoform 1 [Theobroma cacao]
gi|508783704|gb|EOY30960.1| RNA binding protein,
putative isoform 1 [Theobroma cacao]
gi|508783705|gb|EOY30961.1| RNA binding protein,
putative isoform 1 [Theobroma cacao]
Length = 337
Score = 64.3 bits (155), Expect = 5e-08
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ+W DD+W V+GKG G C+D + TLR QNS++Q H + PV
Sbjct: 120 VRQSWQDDEWVVIGKGSGSCEDGKYGENYTLRYNQNSSSQFQNTTRMTNRHLKGECGPVN 179
Query: 183 DNVVLE-SRMVSSRNLKRGPSYELSYAEPQMGAARKVRAVEV-GRRHRIVPVKTS 341
V + S + SS+ LK G S E GA +K RAVE GR +R+V S
Sbjct: 180 KKVNYQVSVIASSKTLKIGC---YSQTEAFAGARQKFRAVEKDGRLYRLVAANPS 231
>gb|EXB76290.1| hypothetical protein L484_025648 [Morus notabilis]
Length = 446
Score = 58.5 bits (140), Expect = 3e-06
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +3
Query: 3 VRQAWMDDQWFVVGKGLGKCKDAMSNKPSTLRIYQNSNNQMPIGDGKMKVHGGDKYFPVE 182
VRQ W DDQW V+GKG G + ++ L QNS+ Q+ ++ + FP
Sbjct: 117 VRQFWQDDQWTVIGKGSGYYDNVKHDEILNLEDNQNSSFQIQKTSRRINPRANGQSFPAT 176
Query: 183 DNVVL-ESRMVSSRNLKRGPSYELSYAEPQMGAARKVRAV-EVGRRHRI 323
+ ES SSR LKR Y S + G +K R + GR HR+
Sbjct: 177 HKLSFQESHFASSRTLKRSSPYCSSQVNARAGTPQKFRVIGNEGRCHRV 225