BLASTX nr result
ID: Cocculus22_contig00014780
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00014780
(508 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vit... 87 3e-15
ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, puta... 86 5e-15
ref|XP_007039274.1| RING-H2 finger protein ATL79, putative [Theo... 86 7e-15
ref|XP_002317036.2| hypothetical protein POPTR_0011s15100g, part... 84 2e-14
ref|XP_002300529.2| hypothetical protein POPTR_0001s45800g [Popu... 84 3e-14
ref|XP_004309562.1| PREDICTED: RING-H2 finger protein ATL79-like... 82 8e-14
ref|XP_004951209.1| PREDICTED: RING-H2 finger protein ATL79-like... 80 3e-13
ref|XP_007209566.1| hypothetical protein PRUPE_ppa011056mg [Prun... 79 5e-13
ref|NP_001152282.1| RNA recognition motif containing protein [Ze... 79 9e-13
ref|XP_002453131.1| hypothetical protein SORBIDRAFT_04g000640 [S... 78 1e-12
ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thali... 77 2e-12
ref|XP_006476237.1| PREDICTED: RING-H2 finger protein ATL79-like... 77 2e-12
ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Caps... 77 2e-12
ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyra... 77 2e-12
ref|XP_006398458.1| hypothetical protein EUTSA_v10001049mg [Eutr... 77 2e-12
ref|XP_006846527.1| hypothetical protein AMTR_s00018p00191870 [A... 77 2e-12
ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Caps... 77 2e-12
ref|XP_006439165.1| hypothetical protein CICLE_v10021802mg [Citr... 77 3e-12
gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d... 77 3e-12
gb|AFW69731.1| putative RING zinc finger domain superfamily prot... 76 4e-12
>ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vitis vinifera]
Length = 187
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LV+S+GMKLAGA AECAICLSEFV GEG+RV+ +CKHGFHV+CI+ WL+
Sbjct: 108 LVFSSGMKLAGAEAECAICLSEFVEGEGIRVMGQCKHGFHVQCIQEWLS 156
>ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
gi|223541951|gb|EEF43497.1| RING-H2 finger protein ATL5M
precursor, putative [Ricinus communis]
Length = 205
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
+VYSAGMKL GA A+CAICLSEFV GEG+RVL CKHGFHV CIE WL+
Sbjct: 107 VVYSAGMKLGGAEADCAICLSEFVEGEGIRVLGSCKHGFHVHCIEQWLS 155
>ref|XP_007039274.1| RING-H2 finger protein ATL79, putative [Theobroma cacao]
gi|508776519|gb|EOY23775.1| RING-H2 finger protein
ATL79, putative [Theobroma cacao]
Length = 211
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVY+ G+KLAGA AECAICLSEFV GEG++VL +CKHGFHV+CI+ WL+
Sbjct: 121 LVYTTGLKLAGAEAECAICLSEFVEGEGIQVLAKCKHGFHVQCIQQWLS 169
>ref|XP_002317036.2| hypothetical protein POPTR_0011s15100g, partial [Populus
trichocarpa] gi|550328435|gb|EEE97648.2| hypothetical
protein POPTR_0011s15100g, partial [Populus trichocarpa]
Length = 258
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = -1
Query: 463 VYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
VY AGMKLAGA A+CAICLSEFV GEG+RVL RC HGFHV C+E WL
Sbjct: 113 VYYAGMKLAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWL 159
>ref|XP_002300529.2| hypothetical protein POPTR_0001s45800g [Populus trichocarpa]
gi|550349971|gb|EEE85334.2| hypothetical protein
POPTR_0001s45800g [Populus trichocarpa]
Length = 216
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = -1
Query: 463 VYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
VYSAGMKL G A+CAICLSEFV GEG+RVL RC HGFHV CIE WL+
Sbjct: 113 VYSAGMKLGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLS 160
>ref|XP_004309562.1| PREDICTED: RING-H2 finger protein ATL79-like [Fragaria vesca subsp.
vesca]
Length = 217
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = -1
Query: 466 LVYSAGMK--LAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS MK LAGAAAECAICLSEFV+GEG+RVL RCKHGFH CI+ WL+
Sbjct: 129 LVYSPEMKAELAGAAAECAICLSEFVDGEGIRVLERCKHGFHSHCIQAWLS 179
>ref|XP_004951209.1| PREDICTED: RING-H2 finger protein ATL79-like [Setaria italica]
Length = 214
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -1
Query: 466 LVYSA-GMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
LVYSA G KLAGAAAECAICL+EFV+G+ VRV+P C HGFH +CIE WL
Sbjct: 126 LVYSAAGTKLAGAAAECAICLAEFVDGDAVRVMPACGHGFHARCIERWL 174
>ref|XP_007209566.1| hypothetical protein PRUPE_ppa011056mg [Prunus persica]
gi|462405301|gb|EMJ10765.1| hypothetical protein
PRUPE_ppa011056mg [Prunus persica]
Length = 225
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Frame = -1
Query: 466 LVYSAGMK--LAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
L YSA MK LAGA AECAICLSEFV GEG+RVL RCKHGFH CI+ WL+
Sbjct: 135 LFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLS 185
>ref|NP_001152282.1| RNA recognition motif containing protein [Zea mays]
gi|195654643|gb|ACG46789.1| RNA recognition motif
containing protein [Zea mays]
Length = 185
Score = 78.6 bits (192), Expect = 9e-13
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -1
Query: 466 LVYSA-GMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
LVYSA G KLAGAAAECAICL+EF +G+ VRV+P C HGFH +CIE WL
Sbjct: 110 LVYSAAGTKLAGAAAECAICLAEFADGDAVRVMPACGHGFHARCIERWL 158
>ref|XP_002453131.1| hypothetical protein SORBIDRAFT_04g000640 [Sorghum bicolor]
gi|241932962|gb|EES06107.1| hypothetical protein
SORBIDRAFT_04g000640 [Sorghum bicolor]
Length = 210
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -1
Query: 466 LVYSA-GMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
LVYSA G KLAGAA ECAICL+EF +G+ VRV+P C+HGFH +CIE WL
Sbjct: 118 LVYSAAGTKLAGAAPECAICLAEFADGDAVRVMPACRHGFHARCIERWL 166
>ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thaliana]
gi|68565286|sp|Q9FGJ6.1|ATL79_ARATH RecName:
Full=RING-H2 finger protein ATL79; Flags: Precursor
gi|9758789|dbj|BAB09087.1| unnamed protein product
[Arabidopsis thaliana] gi|21553634|gb|AAM62727.1|
unknown [Arabidopsis thaliana]
gi|51969080|dbj|BAD43232.1| unknown protein [Arabidopsis
thaliana] gi|51971483|dbj|BAD44406.1| unknown protein
[Arabidopsis thaliana] gi|98960905|gb|ABF58936.1|
At5g47610 [Arabidopsis thaliana]
gi|332008154|gb|AED95537.1| RING-H2 finger protein ATL79
[Arabidopsis thaliana]
Length = 166
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS+ ++LAGA AECAICLSEF GE ++VL +C+HGFHVKCI WL+
Sbjct: 92 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLS 140
>ref|XP_006476237.1| PREDICTED: RING-H2 finger protein ATL79-like [Citrus sinensis]
Length = 256
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
+VYSAG+KL GA AEC ICLSEFV G+ ++VL RCKHGFH +CI+ WL
Sbjct: 181 VVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWL 228
>ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Capsella rubella]
gi|482548205|gb|EOA12399.1| hypothetical protein
CARUB_v10027259mg [Capsella rubella]
Length = 166
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS+ ++LAGA AECAICLSEF GE ++VL +C+HGFHVKCI WL+
Sbjct: 92 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLS 140
>ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309165|gb|EFH39589.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 166
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS+ ++LAGA AECAICLSEF GE ++VL +C+HGFHVKCI WL+
Sbjct: 92 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLS 140
>ref|XP_006398458.1| hypothetical protein EUTSA_v10001049mg [Eutrema salsugineum]
gi|557099547|gb|ESQ39911.1| hypothetical protein
EUTSA_v10001049mg [Eutrema salsugineum]
Length = 175
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/83 (44%), Positives = 48/83 (57%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLNXXXXXXXXXXX 287
LVYS+ ++LAGA AECAICLSEF GE ++VL +C HGFHVKCI WL+
Sbjct: 93 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCINKWLSSRSSCPTCRTS 152
Query: 286 XCLVTSSPDKSPVVVVTPISSNS 218
+ D +P P +N+
Sbjct: 153 IFSQQHTLDSAPSTETPPSQNNT 175
>ref|XP_006846527.1| hypothetical protein AMTR_s00018p00191870 [Amborella trichopoda]
gi|548849337|gb|ERN08202.1| hypothetical protein
AMTR_s00018p00191870 [Amborella trichopoda]
Length = 186
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
LVYSAGM L G+ AECAICL+EF +GE +RVLP C HGFH C+E WL
Sbjct: 117 LVYSAGMGLPGSVAECAICLTEFCDGERIRVLPNCGHGFHAGCVERWL 164
>ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Capsella rubella]
gi|482551638|gb|EOA15831.1| hypothetical protein
CARUB_v10007395mg [Capsella rubella]
Length = 170
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS GM LAG AEC ICLSEF +G+ +RVL RCKHGFHV CI+ WL+
Sbjct: 89 LVYSPGMNLAGTEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQKWLS 137
>ref|XP_006439165.1| hypothetical protein CICLE_v10021802mg [Citrus clementina]
gi|557541427|gb|ESR52405.1| hypothetical protein
CICLE_v10021802mg [Citrus clementina]
Length = 256
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
+VYSAG+KL GA AEC ICLSEFV G+ ++VL RCKHGFH +CI+ WL
Sbjct: 181 VVYSAGIKLTGAEAECVICLSEFVAGDVIQVLERCKHGFHSQCIQKWL 228
>gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 466 LVYSAGMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWLN 320
LVYS+ ++LAGA AECAICLSEF GE ++VL +C HGFHVKCI WL+
Sbjct: 509 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCIHKWLS 557
>gb|AFW69731.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 144
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -1
Query: 466 LVYSA-GMKLAGAAAECAICLSEFVNGEGVRVLPRCKHGFHVKCIEGWL 323
LVYSA G KLAGAAAECAICL+EF +G+ VRV+P C HGFH +CIE WL
Sbjct: 71 LVYSAAGTKLAGAAAECAICLAEFADGDTVRVMPVCGHGFHARCIELWL 119