BLASTX nr result
ID: Cocculus22_contig00014757
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00014757
(309 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 129 5e-28
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 128 9e-28
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 126 3e-27
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 125 5e-27
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 124 2e-26
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3... 124 2e-26
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3... 124 2e-26
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein... 123 3e-26
ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus t... 123 3e-26
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro... 122 4e-26
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3... 122 4e-26
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3... 122 4e-26
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro... 122 4e-26
dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein... 122 5e-26
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3... 122 5e-26
ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3... 122 7e-26
gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum l... 122 7e-26
sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding pro... 122 7e-26
gb|EYU38943.1| hypothetical protein MIMGU_mgv1a012024mg [Mimulus... 121 9e-26
ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3... 121 9e-26
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 129 bits (323), Expect = 5e-28
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
GQAVKLSP+ L G GR +MRKTAGKPKPVSSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 128 bits (321), Expect = 9e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
GQA+KL+PS+ L G GR +MRKTAG+PKPVSSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 126 bits (317), Expect = 3e-27
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ ++SGNGR +MRKTA KPKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
Score = 122 bits (305), Expect = 7e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 302 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 361
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 362 FPGDYGW 368
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 125 bits (315), Expect = 5e-27
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKL+PS +L G GR SMRKT G+PKPVSSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 124 bits (310), Expect = 2e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+ VKL+PS+ ++SGNGR +MRKTA KPKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Solanum lycopersicum]
Length = 255
Score = 124 bits (310), Expect = 2e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+ VKL+PS+ ++SGNGR +MRKTA KPKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Solanum lycopersicum]
gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 2
[Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
PREDICTED: chlorophyll a-b binding protein 3C,
chloroplastic-like isoform 3 [Solanum lycopersicum]
gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 4
[Solanum lycopersicum]
Length = 267
Score = 124 bits (310), Expect = 2e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+ VKL+PS+ ++SGNGR +MRKTA KPKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 123 bits (308), Expect = 3e-26
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNG+ +MRKTA K KPVSSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus trichocarpa]
gi|222859802|gb|EEE97349.1| Chlorophyll a-b binding
protein 2 [Populus trichocarpa]
Length = 264
Score = 123 bits (308), Expect = 3e-26
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+P+L GNGR SMRKT KPVSSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKAVKLSPSSPELMGNGRVSMRKTT---KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 72 FPGDYGW 78
>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor gi|19819|emb|CAA36955.1| unnamed protein
product [Nicotiana tabacum]
Length = 266
Score = 122 bits (307), Expect = 4e-26
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNG+ +MRKTA K KPVSSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 74 FPGDYGW 80
>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 267
Score = 122 bits (307), Expect = 4e-26
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KPVSSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRFTMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 122 bits (307), Expect = 4e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor gi|170212|gb|AAA34056.1| chlorophyll
a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 122 bits (307), Expect = 4e-26
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNG+ +MRKTA K KPVSSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 74 FPGDYGW 80
>dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 122 bits (306), Expect = 5e-26
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNG+ +MRKTA K KPVSSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 122 bits (306), Expect = 5e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
Length = 267
Score = 122 bits (305), Expect = 7e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 122 bits (305), Expect = 7e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor gi|224932|prf||1204205G protein 3C,chlorophyll
binding
Length = 267
Score = 122 bits (305), Expect = 7e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81
>gb|EYU38943.1| hypothetical protein MIMGU_mgv1a012024mg [Mimulus guttatus]
Length = 264
Score = 121 bits (304), Expect = 9e-26
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
GQAVK STP+++GNGR SMRKTA KPKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GQAVK---STPEITGNGRISMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGE 71
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 72 FPGDYGW 78
>ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 121 bits (304), Expect = 9e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 109 GQAVKLSPSTPQLSGNGRTSMRKTAGKPKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGE 288
G+AVKLSPS+ +++GNGR +MRKTA K KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEVTGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 289 FPGDYGW 309
FPGDYGW
Sbjct: 75 FPGDYGW 81