BLASTX nr result
ID: Cocculus22_contig00014549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00014549
(1042 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citr... 87 3e-17
ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-16
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera] 80 1e-15
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi... 80 1e-15
ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [A... 89 3e-15
ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phas... 84 1e-13
ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Popu... 75 4e-13
gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis] 77 7e-13
ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containi... 78 5e-12
ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prun... 77 9e-12
ref|XP_002516112.1| pentatricopeptide repeat-containing protein,... 73 4e-11
gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus... 61 7e-07
ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein... 60 1e-06
ref|XP_006606631.1| PREDICTED: pentatricopeptide repeat-containi... 58 7e-06
>ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citrus clementina]
gi|557556255|gb|ESR66269.1| hypothetical protein
CICLE_v10007870mg [Citrus clementina]
Length = 567
Score = 86.7 bits (213), Expect(2) = 3e-17
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
+IC LC A+GRMQDVE LV CM + GH D MYS +++GYCE+G VE M + H+M+ K
Sbjct: 443 IICGLCMAKGRMQDVEDLVDCMIRSGHNFDFTMYSCLLKGYCEEGNVENVMRIAHEMVTK 502
Query: 181 GFTIDLDSFSV 213
+ I L+SFSV
Sbjct: 503 KYVIGLESFSV 513
Score = 29.3 bits (64), Expect(2) = 3e-17
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 309 RCVISNLDSYRRIMDEHLCNLWSDLPDY 392
RC ++DSYRR++D+ +C S +Y
Sbjct: 536 RCPAVDVDSYRRVLDQQICIRSSSCSNY 563
>ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Citrus sinensis]
gi|343887304|dbj|BAK61850.1| PPR containing protein
[Citrus unshiu]
Length = 567
Score = 83.6 bits (205), Expect(2) = 3e-16
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
+IC LC A+GRMQDVE LV M + GH LD MYS +++GYCE+G VE M + H+M+ K
Sbjct: 443 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 502
Query: 181 GFTIDLDSFSV 213
+ I L+SFSV
Sbjct: 503 KYVIGLESFSV 513
Score = 29.3 bits (64), Expect(2) = 3e-16
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 309 RCVISNLDSYRRIMDEHLCNLWSDLPDY 392
RC ++DSYRR++D+ +C S +Y
Sbjct: 536 RCPAVDVDSYRRVLDQQICIRSSSCSNY 563
>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 80.1 bits (196), Expect(2) = 1e-15
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VI LC A+GRM +VE V M + GH LD MYS +V+GYCEDG +MAM +F +M++
Sbjct: 502 VIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDM 561
Query: 181 GFTIDLDSFSVF 216
G+ I+L+SF F
Sbjct: 562 GYVINLESFLAF 573
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 306 RRCVISNLDSYRRIMDEHLC 365
RRC ++ YRRI+DEHLC
Sbjct: 595 RRCPGIDIHKYRRILDEHLC 614
>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Vitis vinifera]
Length = 563
Score = 80.1 bits (196), Expect(2) = 1e-15
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VI LC A+GRM +VE V M + GH LD MYS +V+GYCEDG +MAM +F +M++
Sbjct: 418 VIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDM 477
Query: 181 GFTIDLDSFSVF 216
G+ I+L+SF F
Sbjct: 478 GYVINLESFLAF 489
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 306 RRCVISNLDSYRRIMDEHLC 365
RRC ++ YRRI+DEHLC
Sbjct: 511 RRCPGIDIHKYRRILDEHLC 530
>ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [Amborella trichopoda]
gi|548853182|gb|ERN11188.1| hypothetical protein
AMTR_s00024p00204830 [Amborella trichopoda]
Length = 550
Score = 89.0 bits (219), Expect = 3e-15
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VICSLC +GRMQ VE LVV M + GHK D MYS MV GYCE+ ++ MA+G+FH+M+EK
Sbjct: 438 VICSLCKCKGRMQKVEDLVVVMLRNGHKPDISMYSEMVMGYCENDDLAMALGVFHEMIEK 497
Query: 181 GFTIDLDSFS 210
G I++ FS
Sbjct: 498 GLAINVQGFS 507
>ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phaseolus vulgaris]
gi|561009955|gb|ESW08862.1| hypothetical protein
PHAVU_009G080600g [Phaseolus vulgaris]
Length = 550
Score = 83.6 bits (205), Expect = 1e-13
Identities = 39/72 (54%), Positives = 47/72 (65%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
+IC LC +GRMQ VE LV M Q GH LD MYS ++ GYCEDG+ EMA+ F+D+M K
Sbjct: 448 LICGLCKVKGRMQAVEELVSDMLQNGHNLDATMYSCLLEGYCEDGDEEMALKTFYDLMNK 507
Query: 181 GFTIDLDSFSVF 216
F I D F F
Sbjct: 508 NFVIKQDIFCTF 519
>ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| hypothetical protein
POPTR_0006s23980g [Populus trichocarpa]
Length = 567
Score = 74.7 bits (182), Expect(2) = 4e-13
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VIC LC + GRMQ+V LV M Q G ++D +YS +V G+CE G EMAM F+D + K
Sbjct: 449 VICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINK 508
Query: 181 GFTIDLDSFSVF 216
+ I+L SFS F
Sbjct: 509 NYVINLQSFSFF 520
Score = 27.3 bits (59), Expect(2) = 4e-13
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 306 RRCVISNLDSYRRIMDEHL 362
RRC + ++DSY+R++D+ L
Sbjct: 542 RRCSLVDVDSYQRVLDDQL 560
>gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]
Length = 563
Score = 77.0 bits (188), Expect(2) = 7e-13
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VICSLCG +G MQ+VE LV M GH D +Y +V+ YCEDG V+ AM +F++ +++
Sbjct: 439 VICSLCGMKGMMQEVEELVHYMIHDGHIPDLALYCCLVKSYCEDGNVDKAMRVFNETLDR 498
Query: 181 GFTIDLDSFS 210
+ I+LDSFS
Sbjct: 499 NYIINLDSFS 508
Score = 24.3 bits (51), Expect(2) = 7e-13
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 300 IRRRCVISNLDSYRRIMDEHLC 365
+ RRC + ++Y++++DE LC
Sbjct: 530 VSRRCSKLDRNTYKKVVDELLC 551
>ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 551
Score = 78.2 bits (191), Expect = 5e-12
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VIC LC +GRMQ VE LV M Q GH LD MY+ ++ GYCED + EMA +D+M+K
Sbjct: 445 VICGLCEVKGRMQQVEELVSNMLQNGHNLDATMYNCLLLGYCEDRDEEMAQKTVYDIMDK 504
Query: 181 GFTIDLDSFSVF 216
F I+ D F F
Sbjct: 505 NFVINQDIFCTF 516
>ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prunus persica]
gi|462421370|gb|EMJ25633.1| hypothetical protein
PRUPE_ppa021491mg [Prunus persica]
Length = 557
Score = 77.4 bits (189), Expect = 9e-12
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VICSLC RGRM +VE V M GHKLDT +YS ++ GYCEDG V MA+ F ++
Sbjct: 407 VICSLCNLRGRMGEVEEFVGDMLWNGHKLDTVLYSCVIMGYCEDGNVNMAIQAFCGALDN 466
Query: 181 GFTIDLDSFSV 213
I L+SFS+
Sbjct: 467 NHIISLESFSI 477
>ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544598|gb|EEF46114.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 72.8 bits (177), Expect(2) = 4e-11
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VI LCGA+GRMQ+V+ L+ M G +D MYS +V+GYCEDG EMA + ++ ++
Sbjct: 342 VIGGLCGAKGRMQNVKELLHNMLCSGLAVDATMYSSLVKGYCEDGNEEMAKQVLYEAIDN 401
Query: 181 GFTIDLDSFSVF 216
+ ID +SFSVF
Sbjct: 402 NYVIDSESFSVF 413
Score = 22.7 bits (47), Expect(2) = 4e-11
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 306 RRCVISNLDSYRRIMDEHL 362
+RC + ++ +Y RI+DE L
Sbjct: 435 KRCSVVDVGNYWRILDEQL 453
>gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus guttatus]
Length = 614
Score = 61.2 bits (147), Expect = 7e-07
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VI L G + R+QD++ +V M + G LDT +YS ++R YC G+V A+ +F +M+++
Sbjct: 504 VIIGLVGVKERIQDIDMIVNDMIRDGLGLDTTLYSFLIRAYCVSGDVRRAVCLFKEMIDQ 563
Query: 181 GFTIDLDSFSVF 216
TI D F VF
Sbjct: 564 SLTIRKDCFEVF 575
>ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782741|gb|EOY29997.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 722
Score = 60.1 bits (144), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVEMAMGMFHDMMEK 180
VICSLC A GRMQ+V LV M Q G +D MY +V G+ EDG EMA+ + ++M
Sbjct: 444 VICSLCRAEGRMQEVRYLVDDMLQNGIVIDATMYGCIVEGHSEDGNEEMAVQVLNEM--- 500
Query: 181 GFTIDLDSF 207
ID+D F
Sbjct: 501 ---IDMDEF 506
>ref|XP_006606631.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62720-like [Glycine max]
Length = 280
Score = 57.8 bits (138), Expect = 7e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 1 VICSLCGARGRMQDVESLVVCMHQGGHKLDTYMYSMMVRGYCEDGEVE 144
+IC LC +GRMQ VE L++ M Q GH LD MY+ ++ GYC+D + E
Sbjct: 225 MICGLCKVKGRMQQVEELILDMLQNGHNLDATMYNCLLAGYCQDRDEE 272