BLASTX nr result
ID: Cocculus22_contig00014429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00014429
(268 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 163 2e-38
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 161 8e-38
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 161 8e-38
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 161 8e-38
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 159 4e-37
gb|AFB73911.1| polyprotein [Citrus sinensis] 158 9e-37
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 156 2e-36
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 148 7e-34
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 123 2e-26
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 121 1e-25
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 117 2e-24
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera] 115 6e-24
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 114 1e-23
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 114 2e-23
ref|XP_006431004.1| hypothetical protein CICLE_v10013666mg [Citr... 113 2e-23
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 113 3e-23
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 113 3e-23
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 112 4e-23
emb|CAN72857.1| hypothetical protein VITISV_029892 [Vitis vinifera] 112 7e-23
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 111 9e-23
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 163 bits (413), Expect = 2e-38
Identities = 81/88 (92%), Positives = 81/88 (92%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDR NRKIWLSQKNYL KILRRFNMQDCK ISTP VNFKLSSSMCPS EAER EM
Sbjct: 1028 MQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEM 1087
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLMFAMICTRPDIAQAVG
Sbjct: 1088 SRVPYASAVGSLMFAMICTRPDIAQAVG 1115
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 161 bits (408), Expect = 8e-38
Identities = 79/88 (89%), Positives = 82/88 (93%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDRK+RKIWLSQKNYL K+LRRFNMQDCKPISTP VNFKLSS M PS EAERMEM
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLM+AMICTRPDIAQAVG
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVG 1111
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 161 bits (408), Expect = 8e-38
Identities = 79/88 (89%), Positives = 82/88 (93%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDRK+RKIWLSQKNYL K+LRRFNMQDCKPISTP VNFKLSS M PS EAERMEM
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLM+AMICTRPDIAQAVG
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVG 1111
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 161 bits (408), Expect = 8e-38
Identities = 79/88 (89%), Positives = 82/88 (93%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDRK+RKIWLSQKNYL K+LRRFNMQDCKPISTP VNFKLSS M PS EAERMEM
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLM+AMICTRPDIAQAVG
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVG 1111
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 159 bits (402), Expect = 4e-37
Identities = 78/88 (88%), Positives = 81/88 (92%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDRK+ KIWLSQKNYL K+LRRFNMQDCKPISTP VNFKLSS M PS EAERMEM
Sbjct: 1024 MQIHRDRKDMKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLM+AMICTRPDIAQAVG
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVG 1111
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 158 bits (399), Expect = 9e-37
Identities = 79/88 (89%), Positives = 79/88 (89%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDR N KIWLSQKNYL KILRRFNMQDCK IST VNFKLSSSMCPS EAER EM
Sbjct: 1028 MQIHRDRNNMKIWLSQKNYLKKILRRFNMQDCKSISTSLPVNFKLSSSMCPSNEAERKEM 1087
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLMFAMICTRPDIAQAVG
Sbjct: 1088 SRVPYASAVGSLMFAMICTRPDIAQAVG 1115
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 156 bits (395), Expect = 2e-36
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDRK+RKIWLSQKNYL K+LRRFNMQD PISTP VN+KLSSSM PS+EAERMEM
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEM 1083
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLM+AMICTRPDIAQAVG
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVG 1111
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 148 bits (374), Expect = 7e-34
Identities = 74/88 (84%), Positives = 77/88 (87%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
MQIHRDR NRKIWLSQKNYL KIL RF+MQDCK ISTP +N K+SSSM PS E RMEM
Sbjct: 1017 MQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEM 1076
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
SRVPYASAVGSLMFAMICTRPDIAQAVG
Sbjct: 1077 SRVPYASAVGSLMFAMICTRPDIAQAVG 1104
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 123 bits (309), Expect = 2e-26
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I RDR+N+K+WLSQ+ Y+ K+L RF+M + KP+STP ++FKL CPS+E E+ EM
Sbjct: 1045 MKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEM 1104
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
RVPY+SAVGSLM+AM+CTRPDIA AVG
Sbjct: 1105 QRVPYSSAVGSLMYAMVCTRPDIAHAVG 1132
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 121 bits (303), Expect = 1e-25
Identities = 53/88 (60%), Positives = 70/88 (79%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I RDRK K+WLSQ+NY+ ++L RFNM++ KP++TP +FKLS CP+TE E+ M
Sbjct: 407 MEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESM 466
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
S +PY+S VGSLM+AM+CTRPDIA AVG
Sbjct: 467 SHIPYSSVVGSLMYAMVCTRPDIAHAVG 494
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 117 bits (292), Expect = 2e-24
Identities = 52/88 (59%), Positives = 71/88 (80%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I R+R +RK+WLSQ+ Y+ ++L RFNM++ KP+STP + KLS MCP+T E+ M
Sbjct: 1047 MKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNM 1106
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
++VPY+SAVGSLM+AM+CTRPDIA AVG
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134
>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
Length = 726
Score = 115 bits (288), Expect = 6e-24
Identities = 50/87 (57%), Positives = 69/87 (79%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+IHRDR + ++WLSQ +Y+ K+L RFNM D KP+STP +F+LS++ CP T+ E +M
Sbjct: 505 MEIHRDRASGRLWLSQYSYVKKVLERFNMDDAKPVSTPLANHFRLSTNQCPKTBDEVKDM 564
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAV 263
S+VPYASA+G LM+AM+CTRPD+A V
Sbjct: 565 SKVPYASAMGCLMYAMVCTRPDLAHVV 591
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 114 bits (286), Expect = 1e-23
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I RDR+ +K+WLSQ+ Y+ K+L+RFNM+ K +S P +F+LS+ PST+ ER +M
Sbjct: 1048 MRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKM 1107
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
R+PYASAVGSLM+AM+CTRPDIA AVG
Sbjct: 1108 ERIPYASAVGSLMYAMVCTRPDIAHAVG 1135
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 114 bits (284), Expect = 2e-23
Identities = 50/88 (56%), Positives = 70/88 (79%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
++I RDR+ +K+WLSQ+NY+ ++L+RF M++ K +STP +FKLS+ PS E E+ +M
Sbjct: 991 IRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDM 1050
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
R+PYASAVGSLM+AM+CTRPDIA VG
Sbjct: 1051 QRIPYASAVGSLMYAMVCTRPDIAHVVG 1078
>ref|XP_006431004.1| hypothetical protein CICLE_v10013666mg [Citrus clementina]
gi|557533061|gb|ESR44244.1| hypothetical protein
CICLE_v10013666mg [Citrus clementina]
Length = 552
Score = 113 bits (283), Expect = 2e-23
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -1
Query: 268 VPTACAISGLVHIIANIKLPTADAYGTRDISILSASVLGHILEDNLKLTRKGVEIGLQSC 89
+ A A+SGLVHIIANIKLPTA+AYGTRDIS LSAS+LGHILEDNLKLT GVEIGLQSC
Sbjct: 483 ISIAGAMSGLVHIIANIKLPTANAYGTRDISFLSASLLGHILEDNLKLTCSGVEIGLQSC 542
Query: 88 MLKRRKIF 65
MLKRRKIF
Sbjct: 543 MLKRRKIF 550
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 113 bits (282), Expect = 3e-23
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I RDRK+ ++LSQ NY+ K+L+RFNMQ+ K +STP +FKLS++ CPST+AE M
Sbjct: 1053 MEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYM 1112
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAV 263
SRVPY+SAVGSLM+AM+C+RPD++ A+
Sbjct: 1113 SRVPYSSAVGSLMYAMVCSRPDLSYAM 1139
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 113 bits (282), Expect = 3e-23
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+I RDRK+ ++LSQ NY+ K+L+RFNMQ+ K +STP +FKLS++ CPST+AE M
Sbjct: 1055 MEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYM 1114
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAV 263
SRVPY+SAVGSLM+AM+C+RPD++ A+
Sbjct: 1115 SRVPYSSAVGSLMYAMVCSRPDLSYAM 1141
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 112 bits (281), Expect = 4e-23
Identities = 48/87 (55%), Positives = 67/87 (77%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
M+IHRDR +R++WLSQ +Y+ ++ RFNM D KP+STP +F+LS++ CP T+ E +M
Sbjct: 399 MEIHRDRASRRLWLSQYSYVKRVFERFNMDDAKPVSTPLANHFRLSTNQCPKTBDEVKDM 458
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAV 263
S+VPYASAVG M+AM+C RPD+A V
Sbjct: 459 SKVPYASAVGCFMYAMVCIRPDLAHTV 485
>emb|CAN72857.1| hypothetical protein VITISV_029892 [Vitis vinifera]
Length = 259
Score = 112 bits (279), Expect = 7e-23
Identities = 51/88 (57%), Positives = 67/88 (76%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
++I DRKN K+W+SQ+ Y+ KIL RFN + K IS+P +FKL+S CP++E E EM
Sbjct: 36 LKISXDRKNGKLWJSQEAYIEKILXRFNXRKAKTISSPXAXHFKLTSKQCPTSEKENEEM 95
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAVG 266
S+VPY+S VGSLM+ M+CTRPDIA AVG
Sbjct: 96 SKVPYSSVVGSLMYVMVCTRPDIAHAVG 123
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 111 bits (278), Expect = 9e-23
Identities = 50/87 (57%), Positives = 68/87 (78%)
Frame = +3
Query: 3 MQIHRDRKNRKIWLSQKNYLVKILRRFNMQDCKPISTPFLVNFKLSSSMCPSTEAERMEM 182
++IHRDR ++WLSQ NY+ ++L RFNM + KP+STP +F+LS+S CP T+ E +M
Sbjct: 128 IEIHRDRALGRLWLSQHNYVKRMLERFNMDNAKPVSTPLANHFRLSTSQCPKTDGEVNDM 187
Query: 183 SRVPYASAVGSLMFAMICTRPDIAQAV 263
S+VPYASAVG LM+AM+CTR D+A AV
Sbjct: 188 SKVPYASAVGCLMYAMVCTRLDLAHAV 214