BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00014004
         (783 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         157   4e-36
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         156   7e-36
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   156   9e-36
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   148   2e-33
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   148   2e-33
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   147   3e-33
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   135   1e-29
ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutr...   133   8e-29
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr...   132   2e-28
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...   131   3e-28
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part...   126   1e-26
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   121   3e-25
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part...   119   2e-24
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu...   118   2e-24
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...   117   5e-24
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   117   5e-24
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu...   115   1e-23
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            105   2e-20
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   105   2e-20
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   103   9e-20

>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  157 bits (397), Expect = 4e-36
 Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTE-LLREFTSKFTGILRTWINSL 317
            GPWF+ D LP  +W    N M+A +D         ++TE +LREF ++FTG LR W +SL
Sbjct: 698  GPWFTFDDLPSYKWRDRLNEMSAWIDLQMLR--SGATTESVLREFATRFTGALRDWFDSL 755

Query: 318  GAYARSRLYQ-SGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRM 494
            G Y + +  Q   + +       +FLGD  +  E  +++Y +MKCCSL  KDL  HY+RM
Sbjct: 756  GPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRM 815

Query: 495  LFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTK 674
               ++ L+G   P L++ F+ASLP  +QP++ R + A       I+LG+IFQLA   L K
Sbjct: 816  SLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQLTASNLVIDNISLGKIFQLAKTCLDK 875

Query: 675  LCDDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDC 779
            LC+  Q   +L K       AC K +L+I C  KKDC
Sbjct: 876  LCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDC 912


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  156 bits (395), Expect = 7e-36
 Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTE-LLREFTSKFTGILRTWINSL 317
            GPWF+ D +P  +W    N M+A +D         ++TE +LREF ++FTG LR W +SL
Sbjct: 796  GPWFTFDDIPSYKWRDRLNEMSAWIDLQMLR--SGATTESVLREFATRFTGALRDWFDSL 853

Query: 318  GAYARSRLYQ-SGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRM 494
            G Y + +  Q   + +       +FLGD  +  E  +++Y +MKCCSL  KDL  HY+RM
Sbjct: 854  GPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRM 913

Query: 495  LFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTK 674
               ++ L+G   P L++ F+ASLP  +QP++ R + A       I+LG+IFQLA   L K
Sbjct: 914  SLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQLTASNLVIDNISLGKIFQLAKTCLDK 973

Query: 675  LCDDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDC 779
            LC+  Q   +L K       AC K +L+I C  KKDC
Sbjct: 974  LCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDC 1010


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  156 bits (394), Expect = 9e-36
 Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTE-LLREFTSKFTGILRTWINSL 317
            GPWF+ D +P  +W    N M+A +D         ++TE +LREF ++FTG LR W +SL
Sbjct: 809  GPWFTYDDIPSYKWRDRLNEMSAWIDLQMLR--SGATTESVLREFATRFTGALRDWFDSL 866

Query: 318  GAYARSRLYQ-SGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRM 494
            G Y + +  Q   + +       +FLGD  +  E  +++Y +MKCCSL  KDL  HY+RM
Sbjct: 867  GPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRM 926

Query: 495  LFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTK 674
               ++ L+G   P L++ F+ASLP  +QP++ R + A       I+LG+IFQLA   L K
Sbjct: 927  SLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQLTASNLVIDNISLGKIFQLAKTCLDK 986

Query: 675  LCDDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDC 779
            LC+  Q   +L K       AC K +L+I C  KKDC
Sbjct: 987  LCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDC 1023


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  148 bits (374), Expect = 2e-33
 Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLG 320
            GPWF++D +P   W        A +D        ++  +++ EF  + TG L+ W ++LG
Sbjct: 809  GPWFTLDDIPPSLWRKRLLEFGAWLDTQMMKTGADTY-KIIEEFCCRMTGTLKEWYHNLG 867

Query: 321  AYARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRML 497
               +  L++             EF+GD+   D K +QE+F M+CCSLK KDL RHYQRM 
Sbjct: 868  PLKQDELHRLVNTAAVLGILHNEFIGDMEIFDRKNRQEFFEMRCCSLKVKDLERHYQRMT 927

Query: 498  FRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKL 677
             RY+ L+G     L+  +I+SLP  +QPE++R+I A  +  + ++LG+I Q+AL++L KL
Sbjct: 928  QRYYVLNGFNDHTLKNIYISSLPQELQPEIHRMIAAARKDVKILSLGQIHQIALEALEKL 987

Query: 678  CDDHQAMTNLQKASGSLSPACAKAHLEIGCK 770
            C  HQ  + + +       AC K +LEI CK
Sbjct: 988  CTLHQHFSEIVQQKSKFIKACKKPYLEIKCK 1018


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  148 bits (373), Expect = 2e-33
 Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
 Frame = +3

Query: 144 PWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGA 323
           PWF++D +P   W        A +D        ++   ++ EF  + TG L+ W ++LG 
Sbjct: 250 PWFTLDDIPPSMWRKRLLEFGAWLDTQMMKTGADTYN-IIEEFCCRMTGTLKEWYHNLGP 308

Query: 324 YARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLF 500
             +  L++             EF+GD+   D K +QE++ M+CCSLK KDL RHYQRM  
Sbjct: 309 LKQDELHRLVNTAAVLGILHSEFIGDMEIFDRKNRQEFYEMRCCSLKVKDLERHYQRMTQ 368

Query: 501 RYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLC 680
           RY+ L+G     L+ T+I+SLP  +QPE++R+I A  +  + ++LG+I Q+ L++L KLC
Sbjct: 369 RYYVLNGFNDHSLKNTYISSLPQELQPEIHRMITATQKDIKALSLGQIHQITLEALEKLC 428

Query: 681 DDHQAMTNLQKASGSLSPACAKAHLEIGCKKD 776
             HQ  + + +       AC K +LEI CK +
Sbjct: 429 RLHQHFSEIVQQKSKFIKACKKPYLEIKCKNN 460


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  147 bits (372), Expect = 3e-33
 Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLG 320
            G WF++D +P   W          +D        ++  +++ EF  + TG L+ W ++LG
Sbjct: 789  GTWFTLDDIPSSLWRKRLLEFGVWLDTQMMKTGADTY-KIIEEFCCRMTGTLKEWYHNLG 847

Query: 321  AYARSRLYQ-SGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRML 497
            ++ +  L +             EF+GD+   D K++QE+F M+CCSLK KDL RHYQRM 
Sbjct: 848  SFKQDELNRLMNTAAVLGILHNEFIGDMEIFDRKIRQEFFEMRCCSLKVKDLQRHYQRMT 907

Query: 498  FRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKL 677
             RY+ L+G     L+ T I+SLP  +QPE++R+I A  +  + ++LG+I Q+AL++L  L
Sbjct: 908  QRYYVLNGFNDHTLKNTHISSLPQELQPEIHRMIAAAQKDVKTLSLGQIHQIALEALENL 967

Query: 678  CDDHQAMTNLQKASGSLSPACAKAHLEIGCK 770
            C  HQ  + + +     + AC K +LEI CK
Sbjct: 968  CRLHQHFSEIVQQKSKFTKACKKPYLEIKCK 998


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  135 bits (341), Expect = 1e-29
 Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
 Frame = +3

Query: 255 ELLREFTSKFTGILRTWINSLGAYARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQE 431
           +++ EF  + TG L+ W ++LG   +  L++             EF+GD+   D K +QE
Sbjct: 9   KIIEEFCCRMTGTLKEWYHNLGPLKQDELHRLVNTAAVLGILHNEFIGDMEIFDRKNRQE 68

Query: 432 YFTMKCCSLKPKDLHRHYQRMLFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADT 611
           +F M+CCSLK KDL RHYQRM  RY+ L+G     L+  +I+SLP  +QPE++R+I A  
Sbjct: 69  FFEMRCCSLKDKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIHRMIAAAQ 128

Query: 612 RSFQQITLGEIFQLALQSLTKLCDDHQAMTNLQKASGSLSPACAKAHLEIGCK 770
           +  + ++LG+I Q+AL++L KLC  HQ  + + +       AC K +LEI CK
Sbjct: 129 KDVKTLSLGQIHQIALEALEKLCRLHQHFSEVMQQKSKFIKACKKPYLEIKCK 181


>ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutrema salsugineum]
            gi|557106321|gb|ESQ46646.1| hypothetical protein
            EUTSA_v10000496mg [Eutrema salsugineum]
          Length = 957

 Score =  133 bits (334), Expect = 8e-29
 Identities = 66/208 (31%), Positives = 117/208 (56%)
 Frame = +3

Query: 150  FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
            F+ D +P+E+W+   +   A +++   T P      ++++FT++ +G L+ W NSLG Y 
Sbjct: 748  FTFDDIPFEKWNDRLDEFHAWMNSEAITSPLEL---VIQQFTTRLSGALKEWWNSLGEYR 804

Query: 330  RSRLYQSGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFRYH 509
            + ++YQ+ +        +EF+G  T L E+L++E+FT KCCSLK +DL +H++R   RY+
Sbjct: 805  QQQVYQTTIPLLLGEIHREFIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYY 864

Query: 510  HLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCDDH 689
             L+G+  P L+   ++S+   +  +    I+   ++ + I++G+I Q   Q+L KLC   
Sbjct: 865  ALNGLNNPSLKQMHLSSIDDYLSQQTKLYIRDQAQTVEYISIGQIQQYVFQTLDKLCKQK 924

Query: 690  QAMTNLQKASGSLSPACAKAHLEIGCKK 773
            +        S  LS  CA+  L I C K
Sbjct: 925  KFWMEFMDKSKQLSRICARPDLSIKCSK 952


>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
            gi|557099163|gb|ESQ39527.1| hypothetical protein
            EUTSA_v10001103mg [Eutrema salsugineum]
          Length = 1135

 Score =  132 bits (331), Expect = 2e-28
 Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 3/213 (1%)
 Frame = +3

Query: 150  FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
            F+ D +P+E+W+   +   A +++   T P      ++++FT++ +G L+ W NSLG Y 
Sbjct: 792  FTFDDIPFEKWNDRLDEFHAWMNSEAITSPLEL---VIQQFTARLSGALKEWWNSLGEYR 848

Query: 330  RSRLYQSGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFRYH 509
            + ++YQ+ +        +EF+G  T L E+L++E+FT KCCSLK +DL +H++R   RY+
Sbjct: 849  QQQVYQTTIPLLLGEIHREFIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYY 908

Query: 510  HLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCDDH 689
             L+G+  P L+   ++SL   +  +    I+    + + I++G+I Q   ++L KLC   
Sbjct: 909  ALNGLNNPSLKQVHLSSLDDYLSQQTKLYIRDQGETVEDISIGQIQQYVFRTLDKLCKQK 968

Query: 690  QAMTNLQKASGSLSPACAKAHLEIGC---KKDC 779
            +        S  LS  CA+  L I C   KK C
Sbjct: 969  EFWMEFMDKSKQLSRICARPDLSIKCLKSKKTC 1001


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema
           salsugineum] gi|557106803|gb|ESQ47118.1| hypothetical
           protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score =  131 bits (329), Expect = 3e-28
 Identities = 65/208 (31%), Positives = 117/208 (56%)
 Frame = +3

Query: 150 FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
           F+ D +P+E+W++  +   A +++   T P      ++++FT++ +G L+ W NSLG Y 
Sbjct: 286 FTFDDIPFEKWNNRLDEFHAWMNSEAITSPLEL---VIQQFTARLSGALKEWWNSLGEYR 342

Query: 330 RSRLYQSGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFRYH 509
           + ++YQ  +        +EF+G  T L E+L++E+FT KCCSLK +DL +H++R   RY+
Sbjct: 343 QQQVYQMIIPLLLGEIHREFIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYY 402

Query: 510 HLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCDDH 689
            L+G+  P L+   ++S+   +  +    I+   ++ + I++G+I Q   ++L KLC   
Sbjct: 403 ALNGLNNPSLKKVHLSSIDDYLSQQTKLYIRDQGQTVEDISIGQIQQYVFRTLDKLCKQK 462

Query: 690 QAMTNLQKASGSLSPACAKAHLEIGCKK 773
           +        S  LS  CA+  L I C K
Sbjct: 463 EFWMEFMDKSKQLSRICARPDLSINCSK 490


>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema
           salsugineum] gi|557104462|gb|ESQ44802.1| hypothetical
           protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
          Length = 988

 Score =  126 bits (316), Expect = 1e-26
 Identities = 63/208 (30%), Positives = 115/208 (55%)
 Frame = +3

Query: 150 FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
           F+ D +P+E+W+   +   A +++   T P      ++++FT++ +G L+ W NSL  Y 
Sbjct: 153 FTFDDIPFEKWNDRLDEFHAWMNSEAITSPLEL---VIQQFTARLSGALKEWWNSLDEYR 209

Query: 330 RSRLYQSGMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFRYH 509
           + ++YQ+ +        +EF+G  T L E+L++E+FT KCCSLK +DL +H++R   RY+
Sbjct: 210 QQQVYQTTIPVLLGEIHREFIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYY 269

Query: 510 HLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCDDH 689
            L+G+  P L+   ++S+   +  +    I+   ++ +  ++G I Q   ++L KLC   
Sbjct: 270 ALNGLNNPSLKQVHLSSIDDYLSQQTKLYIRDQGQTVEDNSIGPIQQYVFRTLDKLCKQK 329

Query: 690 QAMTNLQKASGSLSPACAKAHLEIGCKK 773
           +        S  LS  CA+ +L I C K
Sbjct: 330 EFWMEFMDKSKQLSRICARPNLSIKCSK 357


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
           salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
           protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  121 bits (303), Expect = 3e-25
 Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
 Frame = +3

Query: 117 DPAYHLPKGPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGIL 296
           +P  H      FS D +P  +W      M A +       P ++   ++ +  SKF G L
Sbjct: 311 NPRSHTDSHSGFSFDNVPPSKWRDKIYEMHAWLTEQLLN-PGDTLPTVIDKLISKFHGRL 369

Query: 297 RTWINSLGAYARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDL 473
           R W  SLG Y + ++ QS  ++        +FLG       + ++EY +M+CCS K KDL
Sbjct: 370 RQWWISLGDYRQLQIRQSQSVDTVIGHIHNKFLGTWDHYTIQAREEYMSMRCCSFKRKDL 429

Query: 474 HRHYQRMLFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQL 653
            +HY+RM  R++ L+G+    L+  ++ SLP  +  E +R++     +  Q +LGEI+Q+
Sbjct: 430 EKHYERMSKRFYALNGIDDVNLKQAYLNSLPEPLGNETSRILSLKNMTLSQASLGEIYQI 489

Query: 654 ALQSLTKLCDDHQAMTNLQKASGSLSPACAKAHLEIGCK 770
           +L +L KLC+  +    LQ+    L  AC +  L I CK
Sbjct: 490 SLSALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCK 528


>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
            gi|557104186|gb|ESQ44532.1| hypothetical protein
            EUTSA_v10003477mg, partial [Eutrema salsugineum]
          Length = 751

 Score =  119 bits (297), Expect = 2e-24
 Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
 Frame = +3

Query: 117  DPAYHLPKGPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGIL 296
            +P  H      FS D +P  +W      M A +       P  +   ++ +  SKF G L
Sbjct: 456  NPRSHTDSHSGFSFDNVPPSKWRDKIYEMLAWLTEQLLN-PGATLPTVIDKLISKFHGRL 514

Query: 297  RTWINSLGAYARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDL 473
            R W  SLG Y   ++ QS  ++   +    EFLG       + ++EY +M+CCS K KDL
Sbjct: 515  RQWWTSLGDYRELQIRQSHSVDTVIEHIHNEFLGMWDHYTIQAREEYMSMRCCSFKRKDL 574

Query: 474  HRHYQRMLFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQL 653
             +HY+RM  R + L+G+     +  ++  LP  +  E +R++     +  Q +LGEI+Q+
Sbjct: 575  EKHYERMSKRLYALNGIDDVNHKQAYLNQLPEPLGNETSRILSLKNMTLSQASLGEIYQI 634

Query: 654  ALQSLTKLCDDHQAMTNLQKASGSLSPACAKAHLEIGCKK 773
            +L +L KLC+  +    LQ+    L  AC +  L I CKK
Sbjct: 635  SLAALEKLCNHQKFFKQLQEQGTLLGRACDRPELSIKCKK 674


>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
            gi|222860472|gb|EEE98019.1| hypothetical protein
            POPTR_0011s07150g [Populus trichocarpa]
          Length = 950

 Score =  118 bits (296), Expect = 2e-24
 Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 4/217 (1%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSST-ELLREFTSKFTGILRTWINSL 317
            G +F++D +P  +W     I+  H     +   + ++  + L++F++KF+G L  W ++L
Sbjct: 672  GGYFTLDDIPQVKWRD--RILEFHSWLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHAL 729

Query: 318  GAYARSRLYQSG-MENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRM 494
            G Y + +   S  +         EFLG+  +  E  + EYF MKCCS    DL RH+++M
Sbjct: 730  GDYRQMQFVNSASLSEALGWLHYEFLGEALNDKEIARYEYFKMKCCSYLRSDLERHFKKM 789

Query: 495  LFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTK 674
              RYH L G   P L++ F+AS+P  +  E  RL +         +LG IF   L++L K
Sbjct: 790  CRRYHILSGPDDPSLKHAFLASIPRDLADETFRLFKTRKEVIDNQSLGTIFHQVLEALNK 849

Query: 675  LCDDHQAMTNLQKASGSLSPACAKAHLEIGCKK--DC 779
            +CD H+  T + +   ++  AC +  L I C    DC
Sbjct: 850  MCDQHKYFTKILQPDKTMLRACKRPDLLIKCSDNVDC 886


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
           gi|557107078|gb|ESQ47393.1| hypothetical protein
           EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score =  117 bits (293), Expect = 5e-24
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
 Frame = +3

Query: 150 FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
           FS D +P  +W      M A +       P  +   ++ +  SKF G LR W  SLG Y 
Sbjct: 298 FSFDNVPPSKWRDKIYEMHAWLTEQLLN-PGATLPTVIDKLISKFQGRLRQWWISLGDYR 356

Query: 330 RSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFRY 506
           +  + QS  ++        EFLG       + ++EY +M+CCS K KDL +HY+RM  R+
Sbjct: 357 QLHIRQSQSVDTVIGHIHNEFLGTWDHYTIQAREEYMSMRCCSFKRKDLEKHYERMSKRF 416

Query: 507 HHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCDD 686
           + L+G+    L+  ++ SLP  +  E ++++     +  Q +LGEI+Q++L +L KLC+ 
Sbjct: 417 YVLNGIDDVNLKQAYLNSLPEPLGNETSQILSLKNMTLSQASLGEIYQISLAALEKLCNH 476

Query: 687 HQAMTNLQKASGSLSPACAKAHLEIGCK-KDCQ 782
            +    LQ+    L  AC +  L I CK K C+
Sbjct: 477 QKFFKQLQEKGKLLGRACDRPELSIKCKTKRCK 509


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  117 bits (293), Expect = 5e-24
 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
 Frame = +3

Query: 117  DPAYHLPKGPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGIL 296
            +P  H       S D +P  +W      M A +       P  +   ++ +  SKF G L
Sbjct: 682  NPRSHTDSHSGLSFDNVPSSKWGDKIYEMHAWLTEQLLN-PGATLPTVIVKLISKFHGHL 740

Query: 297  RTWINSLGAYARSRLYQS-GMENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDL 473
            R W  SLG Y + ++ QS  ++        EF G       + ++EY +M+CCS K KDL
Sbjct: 741  RQWWISLGDYRQLQIRQSQSVDTVIGHIHNEFFGTWDHYTIQAREEYMSMRCCSFKRKDL 800

Query: 474  HRHYQRMLFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQL 653
             +HY+RM  R++ L+G+    L+ T++ SLP  +  E +R++     +  Q +LGEI+++
Sbjct: 801  EKHYERMSKRFYALNGIDDVNLKQTYLKSLPEPLGNETSRILSLKNMTLSQASLGEIYKI 860

Query: 654  ALQSLTKLCDDHQAMTNLQKASGSLSPACAKAHLEIGCK 770
            +L +L KLC+  +    LQ+    L  AC +  L I CK
Sbjct: 861  SLAALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCK 899


>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
            gi|550326181|gb|ERP54440.1| hypothetical protein
            POPTR_0012s01890g [Populus trichocarpa]
          Length = 1153

 Score =  115 bits (289), Expect = 1e-23
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
 Frame = +3

Query: 141  GPWFSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSST-ELLREFTSKFTGILRTWINSL 317
            G +F++D +P  +W     I+  H     +   + ++  + L++F++KF+G L  W ++L
Sbjct: 363  GGYFTLDDIPRVKWQD--RILEFHSWLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHAL 420

Query: 318  GAYARSRLYQSG-MENFWKTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRM 494
            G Y + +   S  +         EFLG+  +  E  + EYF MKCCS    DL RH++ M
Sbjct: 421  GDYRQMQFVNSASLSEALGWLHYEFLGEALNDKEIARYEYFKMKCCSYLRSDLERHFKEM 480

Query: 495  LFRYHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTK 674
              RYH L G   P L++ F+AS+P  +  E  RL +         +LG IF   L++L K
Sbjct: 481  CQRYHILFGPDDPSLKHAFLASIPRDLANETFRLFKTRKEVIDNQSLGTIFHQVLEALNK 540

Query: 675  LCDDHQAMTNLQKASGSLSPACAKAHLEIGCK--KDC 779
            +CD H+  T + +   ++  AC +  L I C    DC
Sbjct: 541  ICDQHKYFTKILQPDKTMLHACKRPDLLIKCSDHADC 577


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  105 bits (262), Expect = 2e-20
 Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
 Frame = +3

Query: 150  FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
            FS+D +   +W     I   H   +     E     +L EFT++ +G LR W NS+G   
Sbjct: 856  FSLDDISITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDD 913

Query: 330  RSRLYQSGMENFW--KTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFR 503
            ++R   S  +  W  +     F GD +   E+L+++ F MKC S   K + RH+QRM+  
Sbjct: 914  KNRFLTS-QDFTWNIRILYSYFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKL 972

Query: 504  YHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCD 683
            ++H+ G  +  L+  FI+SLPP++   ++ LI+    S  Q+ +G+I Q A   L  LC 
Sbjct: 973  FYHIGGDIS--LKQAFISSLPPILSERISALIKERGTSVTQMHVGDIRQTAFYVLDDLCS 1030

Query: 684  DHQAMTNLQKASGSLSPACAKAHLEIGCKKDC 779
              +    ++K S  L  AC K+ L I   K C
Sbjct: 1031 KRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC 1062


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  105 bits (262), Expect = 2e-20
 Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
 Frame = +3

Query: 150  FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
            FS+D +   +W     I   H   +     E     +L EFT++ +G LR W NS+G   
Sbjct: 855  FSLDDISITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDD 912

Query: 330  RSRLYQSGMENFW--KTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFR 503
            ++R   S  +  W  +     F GD +   E+L+++ F MKC S   K + RH+QRM+  
Sbjct: 913  KNRFLTS-QDFTWNIRILYSYFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKL 971

Query: 504  YHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCD 683
            ++H+ G  +  L+  FI+SLPP++   ++ LI+    S  Q+ +G+I Q A   L  LC 
Sbjct: 972  FYHIGGDIS--LKQAFISSLPPILSERISALIKERGTSVTQMHVGDIRQTAFYVLDDLCS 1029

Query: 684  DHQAMTNLQKASGSLSPACAKAHLEIGCKKDC 779
              +    ++K S  L  AC K+ L I   K C
Sbjct: 1030 KRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC 1061


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  103 bits (256), Expect = 9e-20
 Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
 Frame = +3

Query: 150  FSIDKLPYEQWHSYFNIMAAHVDAMFFTYPENSSTELLREFTSKFTGILRTWINSLGAYA 329
            FS+D +   +W     I   H   +     E     +L EFT++ +G LR W NS+G   
Sbjct: 856  FSLDDISITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDD 913

Query: 330  RSRLYQSGMENFW--KTFTKEFLGDITSLDEKLKQEYFTMKCCSLKPKDLHRHYQRMLFR 503
            ++R   S  +  W  +     F GD +   E+L+++ F MKC S   K + RH+QRM+  
Sbjct: 914  KNRFLTS-QDFTWNIRILYSYFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKL 972

Query: 504  YHHLDGVATPELRYTFIASLPPLIQPELNRLIQADTRSFQQITLGEIFQLALQSLTKLCD 683
            ++H+ G  +  L+  FI+SLPP++   ++ LI+    S  Q+ +G+I Q     L  LC 
Sbjct: 973  FYHIGGDIS--LKQAFISSLPPILSERISALIKERGTSGTQMHVGDIRQTGFYVLDDLCS 1030

Query: 684  DHQAMTNLQKASGSLSPACAKAHLEIGCKKDC 779
              +    ++K S  L  AC K+ L I   K C
Sbjct: 1031 KRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC 1062