BLASTX nr result
ID: Cocculus22_contig00013998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00013998
(503 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 247 1e-63
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 247 1e-63
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 231 1e-58
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus... 230 2e-58
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 228 7e-58
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 226 3e-57
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 226 3e-57
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 225 4e-57
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 225 4e-57
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 225 6e-57
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 225 6e-57
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 223 2e-56
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 223 3e-56
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 223 3e-56
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 221 1e-55
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 221 1e-55
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 219 4e-55
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 217 2e-54
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 216 3e-54
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 214 8e-54
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 247 bits (631), Expect = 1e-63
Identities = 125/149 (83%), Positives = 140/149 (93%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+ VMGT GV G +TTSN+IIEV++TLGIEAARKCII+EIQYTMASHGMSIDIRHMMLLA
Sbjct: 1670 LQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLA 1729
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS +GRDDKIEGVSECIIMGI
Sbjct: 1730 DLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGI 1789
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L+Q +L+YGLDPII
Sbjct: 1790 PMQLGTGILKVRQRLQQVPELSYGLDPII 1818
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 247 bits (631), Expect = 1e-63
Identities = 125/149 (83%), Positives = 140/149 (93%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+ VMGT GV G +TTSN+IIEV++TLGIEAARKCII+EIQYTMASHGMSIDIRHMMLLA
Sbjct: 1234 LQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLA 1293
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS +GRDDKIEGVSECIIMGI
Sbjct: 1294 DLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGI 1353
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L+Q +L+YGLDPII
Sbjct: 1354 PMQLGTGILKVRQRLQQVPELSYGLDPII 1382
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 231 bits (588), Expect = 1e-58
Identities = 115/149 (77%), Positives = 130/149 (87%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+AVMGT GVDGC T SN+IIEV++ LGIEAARKCII EI+YTM SHGMSIDIRHMMLL
Sbjct: 1251 LQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLG 1310
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS NGRDDKIEGVSEC+IMGI
Sbjct: 1311 DLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGI 1370
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PM +GTG+LKVRQ + +L YG I+
Sbjct: 1371 PMPLGTGMLKVRQRVSVPQQLPYGPPAIL 1399
>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
Length = 1109
Score = 230 bits (586), Expect = 2e-58
Identities = 118/149 (79%), Positives = 136/149 (91%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L +VMG GV+G KTTSN+IIEV+ TLGIEAARK II EIQYTM+SHGM+IDIRHMMLLA
Sbjct: 961 LLSVMGIEGVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLA 1020
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT+KGEVLGITR+G+QKMK+SVLMLASFE+TSDHLFNAS +G+ DKIEGVSECIIMGI
Sbjct: 1021 DLMTFKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKVDKIEGVSECIIMGI 1080
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
P+QIGTG+LKVRQS+K ++L YG DPII
Sbjct: 1081 PVQIGTGMLKVRQSVK-PIELTYGPDPII 1108
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 228 bits (581), Expect = 7e-58
Identities = 118/149 (79%), Positives = 134/149 (89%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L +VMG GV+G KTTSN+IIEV+ LGIEAARK II EIQYTM+SHGM+IDIRHMMLLA
Sbjct: 1246 LLSVMGIEGVEGRKTTSNHIIEVQHILGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLA 1305
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT KGEVLGITR+G+QKMK+SVLMLASFE+TSDHLFNAS NGR DKIEGVSECIIMGI
Sbjct: 1306 DLMTSKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASVNGRVDKIEGVSECIIMGI 1365
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
P+QIGTG+LKVRQ++K ++L YG DPII
Sbjct: 1366 PVQIGTGMLKVRQNVK-PIELTYGPDPII 1393
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 226 bits (576), Expect = 3e-57
Identities = 115/149 (77%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L VMGT GVDGCKTTSN+++EV++ LGIEAARKCII EI TM HGMSIDIRHMMLL
Sbjct: 1234 LDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLG 1293
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT+KGEVLGITRFGIQKM +SVLMLASFEKT+DHL++A+ GRDDKIEGVSECIIMGI
Sbjct: 1294 DLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGI 1353
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQIGTGILKV+Q + LNYG D II
Sbjct: 1354 PMQIGTGILKVQQRVDPPPVLNYGSDSII 1382
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 226 bits (575), Expect = 3e-57
Identities = 114/149 (76%), Positives = 129/149 (86%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD T SN+I+E+ TLGIEAAR+ II EIQYTM SHGM+ID+RHMMLLA
Sbjct: 1248 LLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLA 1307
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGEVLGITR+GI KMK SVLMLASFEKTS+HLFNAS++GR+D+IEGVSECIIMGI
Sbjct: 1308 DLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGI 1367
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L +L Y DPI+
Sbjct: 1368 PMQLGTGILKVRQRLDHLPELKYQPDPIL 1396
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 225 bits (574), Expect = 4e-57
Identities = 113/149 (75%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD KT SN+I+EV TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLA
Sbjct: 1240 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLA 1299
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGE+LGITR+GI KMK SVLMLASFEKT++HLFNAS++GR+D+IEGVSECIIMGI
Sbjct: 1300 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGI 1359
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L + Y DPI+
Sbjct: 1360 PMQLGTGILKVRQRLDHLPEFKYQPDPIL 1388
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 225 bits (574), Expect = 4e-57
Identities = 113/149 (75%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD KT SN+I+E +TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLA
Sbjct: 1242 LLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLA 1301
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGE+LGITR+GI KMK SVLMLASFEKTS+HLFNAS++GR+D+IEGVSECIIMGI
Sbjct: 1302 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGI 1361
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L + Y DPI+
Sbjct: 1362 PMQLGTGILKVRQRLDHVPEFKYQPDPIL 1390
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 225 bits (573), Expect = 6e-57
Identities = 113/149 (75%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD KT SN+I+EV TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLA
Sbjct: 1172 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLA 1231
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGE+LGITR+GI KMK SVLMLASFEKT++HLFNAS++GR+D+IEGVSECIIMGI
Sbjct: 1232 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGI 1291
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L + Y DPI+
Sbjct: 1292 PMQLGTGILKVRQRLDHLPEFKYQPDPIL 1320
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 225 bits (573), Expect = 6e-57
Identities = 113/149 (75%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD KT SN+I+EV TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLA
Sbjct: 1234 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLA 1293
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGE+LGITR+GI KMK SVLMLASFEKT++HLFNAS++GR+D+IEGVSECIIMGI
Sbjct: 1294 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGI 1353
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L + Y DPI+
Sbjct: 1354 PMQLGTGILKVRQRLDHLPEFKYQPDPIL 1382
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 223 bits (568), Expect = 2e-56
Identities = 113/149 (75%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L VMGT GVDG T +N+IIEV++TLGIEAAR CII EI+YTM SHGMSID RHMMLLA
Sbjct: 1029 LLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLA 1088
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
D+MT +GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS NGR+DKIEGVSECIIMGI
Sbjct: 1089 DVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGI 1148
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQIGTG++KVRQ + L+YG PI+
Sbjct: 1149 PMQIGTGMIKVRQRVDVPPMLSYGPKPIL 1177
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 223 bits (567), Expect = 3e-56
Identities = 115/149 (77%), Positives = 130/149 (87%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMG GVDG T SN+I+EV+ TLGIEAAR II EI YTM+SHGM+ID+RHMMLLA
Sbjct: 1241 LLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLA 1300
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGEVLGITR G+QKMK+SVLMLASFEKT+DHLFNAS NGRDDKIEGV+ECIIMGI
Sbjct: 1301 DLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGI 1360
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PM IGTG+ K+RQ ++Q V+LNY DPII
Sbjct: 1361 PMTIGTGMFKLRQRVEQ-VELNYQPDPII 1388
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 223 bits (567), Expect = 3e-56
Identities = 112/149 (75%), Positives = 127/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVD KT SN+I+E +TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLA
Sbjct: 187 LLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLA 246
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGE+LGITR+GI KMK SVLMLASFEKT++HLFNAS++GR D+IEGVSECIIMGI
Sbjct: 247 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGI 306
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQ+GTGILKVRQ L + Y DPI+
Sbjct: 307 PMQLGTGILKVRQRLDHVPEFKYQPDPIL 335
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 221 bits (562), Expect = 1e-55
Identities = 113/150 (75%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+AVMG G+DGCKT SN+I EV++TLGIEAAR CII EI TM +HGMSID RHMMLLA
Sbjct: 1254 LQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLA 1313
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS NGRDD+IEGVSECIIMGI
Sbjct: 1314 DLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGI 1373
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGL-DPII 57
PM +GTGILK+RQ L YG DPI+
Sbjct: 1374 PMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1403
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 221 bits (562), Expect = 1e-55
Identities = 113/150 (75%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+AVMG G+DGCKT SN+I EV++TLGIEAAR CII EI TM +HGMSID RHMMLLA
Sbjct: 1247 LQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLA 1306
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++GEVLGITRFGIQKM +SVLMLASFEKT+DHLFNAS NGRDD+IEGVSECIIMGI
Sbjct: 1307 DLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGI 1366
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGL-DPII 57
PM +GTGILK+RQ L YG DPI+
Sbjct: 1367 PMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1396
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 219 bits (557), Expect = 4e-55
Identities = 112/149 (75%), Positives = 129/149 (86%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMG GVDG T SN+I+EV+ TLGIEAAR II EI YTM+SHGM+ID+RHMMLLA
Sbjct: 1241 LLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLA 1300
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMTYKGEVLGITR G+QKMK+SVLMLASFEKT+DHLFNAS NGRDDKIEGV+ECIIMGI
Sbjct: 1301 DLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGI 1360
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PM IGTG+ K+RQ + + V+LNY DP++
Sbjct: 1361 PMTIGTGMFKLRQRV-EHVELNYQPDPMM 1388
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 217 bits (552), Expect = 2e-54
Identities = 113/149 (75%), Positives = 126/149 (84%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L AVMGTPGVDG TTSN+I+EV+ TLGIEAARK II EIQYTM SHGMSID+RHMMLLA
Sbjct: 1234 LLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLA 1293
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
DLMT++G VLGI RFGI KMKESVLMLASFE+T+D LF+A+ GR D I GVSECIIMG+
Sbjct: 1294 DLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGV 1353
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQIGTGIL V+Q +Q KL YG DPII
Sbjct: 1354 PMQIGTGILSVQQRPEQLAKLTYGPDPII 1382
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 216 bits (549), Expect = 3e-54
Identities = 107/149 (71%), Positives = 128/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+AVMG GV+G T SN++IE ++TLGIEAAR II EIQYTM SHGM+ID RHMMLLA
Sbjct: 1248 LKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLA 1307
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
D+MTYKGEVLGITRFGI KMK+SVLMLASFEKT+DHLF+A+ +GR DKIEGVSECIIMGI
Sbjct: 1308 DVMTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGI 1367
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PM IGTG+ K+RQ +++ KL+YG P++
Sbjct: 1368 PMPIGTGLFKIRQKVEKLPKLSYGPTPLL 1396
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 214 bits (546), Expect = 8e-54
Identities = 105/149 (70%), Positives = 127/149 (85%)
Frame = -1
Query: 503 LRAVMGTPGVDGCKTTSNNIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLA 324
L+AVMG G+DG +T SN+++E+++ LGIEAARKCII EI TM HGM+ID RHMMLLA
Sbjct: 1246 LQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLA 1305
Query: 323 DLMTYKGEVLGITRFGIQKMKESVLMLASFEKTSDHLFNASFNGRDDKIEGVSECIIMGI 144
D+MT++GEVLGITRFGIQKM +S+LMLASFE+T+DHLFNA+ NGRDDKIEGV+ECIIMGI
Sbjct: 1306 DVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGI 1365
Query: 143 PMQIGTGILKVRQSLKQEVKLNYGLDPII 57
PMQIGTGILKV Q + L YG DP++
Sbjct: 1366 PMQIGTGILKVIQRVDPPPMLRYGPDPVL 1394