BLASTX nr result
ID: Cocculus22_contig00013941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00013941
(1155 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 83 5e-18
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part... 83 3e-13
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 82 4e-13
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 82 4e-13
ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, part... 79 3e-12
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 79 3e-12
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 4e-12
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 75 4e-11
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 75 5e-11
gb|ABK28243.1| unknown [Arabidopsis thaliana] 75 5e-11
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 75 5e-11
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 75 7e-11
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 73 1e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 74 2e-10
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript... 74 2e-10
gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana] 72 3e-10
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 3e-10
ref|XP_006584439.1| PREDICTED: putative ribonuclease H protein A... 60 4e-10
ref|XP_007018598.1| Uncharacterized protein TCM_034780 [Theobrom... 72 4e-10
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 72 4e-10
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 82.8 bits (203), Expect(2) = 5e-18
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 18/284 (6%)
Frame = -1
Query: 816 KIQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPD--CCLGHTCDE 643
K QS++ +W P + +W AL+GKL +LA NIIP D C + + E
Sbjct: 1041 KPQSKIRIWGRLWRGLIPPRIEVFSWVALLGKLNSRQKLATLNIIPPDDAVCIMCNGAPE 1100
Query: 642 TENHLFFECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYS 463
T +HL C F+S++W L IW S L EA + + F
Sbjct: 1101 TSDHLLLHCPFASSIWLWWL-GIWNVSWVFPKNLFEAFEQWYCHKKNPFFRKVWCSIFSI 1159
Query: 462 TIHYVWVERNNMIFRGKRSSVKSLWKKIADILAFKVDG----------EMISHPPPLHSP 313
I +W ERN IFRG S L + L + + G E++ HP L S
Sbjct: 1160 IIWTIWKERNARIFRGISCSSNKLQDLVIIRLMWWIKGWGEAFPYSIVEVLRHPQCL-SW 1218
Query: 312 NNFIATRWKISISHNVGISSWWSPPSQGMAKLNTDGSLKGHNMGYGGIIRDCRGSPILAY 133
+ A ++S + WSPP+ G+ K N D S+ GG++R+ +G + +
Sbjct: 1219 DYLKAAPAATAVSVD---GMLWSPPNDGVMKWNVDASVNAGRSAIGGVLRNSQGIFVCVF 1275
Query: 132 AGQK*GNLVIEAECFALFRGL------SFLRQAGFDSAIVESDA 19
+ + AE A++R + FL++A ++ESD+
Sbjct: 1276 SCPIPSIEINSAEIIAIYRAMQICYSFEFLKRA---PLVLESDS 1316
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Frame = -3
Query: 1144 SLRDLVEPLILHLVGKGNGTRLWVDRWHPDGILLWPFDKNFAKTFDLNLHLTRGRGENCF 965
S R V+ + VG G T W+D W D L F + F D + G C
Sbjct: 917 SARSFVKTKLRKAVGNGVKTLFWLDTWLGDSPLKLRFPRLFT-IVDNPMAYIASCGSWCG 975
Query: 964 QDILTDLGLSNL--------WHDIE----TICKLYANEDDRVIWTPTANG 851
++ + + S + W +++ ++C L + DDR+IWTP +G
Sbjct: 976 REWVWNFSWSRVFRPRDAEEWEELQGLLGSVC-LSPSTDDRLIWTPHKSG 1024
>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
gi|462403441|gb|EMJ08998.1| hypothetical protein
PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 82.8 bits (203), Expect = 3e-13
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 6/273 (2%)
Frame = -1
Query: 804 RVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLF 625
R W +I W +P WR ++ LP L R II SP C + + +E+E H
Sbjct: 601 RGVWKDI-WASPTLPKVKFFLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAI 659
Query: 624 FECQFSSALW--SQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHY 451
F C ++ A+W S + + P SIT F ++ F + L ++F S
Sbjct: 660 FLCPWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFISW--E 717
Query: 450 VWVERNNMIFRGKRSSVKSLWKKIADILAFKVDGEMISHPPPLHSPNNFIATRWKISISH 271
+W R +F + + ++ A A + D + R +IS +
Sbjct: 718 IWKARCKFLFEDITIDPRCVVERAASA-AEEFD----------------VLRRHEISTRN 760
Query: 270 NVGISSW----WSPPSQGMAKLNTDGSLKGHNMGYGGIIRDCRGSPILAYAGQK*GNLVI 103
G+ S W PP G K+N D + K H G G ++R+ +A ++ N +
Sbjct: 761 GAGVFSQPTDIWKPPVNGAIKINFDAAWKNHEAGLGVVMRNHNKDFCYGFASKRCCNSAL 820
Query: 102 EAECFALFRGLSFLRQAGFDSAIVESDAKIVMD 4
AE A L G+ +ESD+K+++D
Sbjct: 821 NAETEAAIEALRCASLRGYSKIEMESDSKVLID 853
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 82.0 bits (201), Expect = 4e-13
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 6/268 (2%)
Frame = -1
Query: 786 IIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFFECQFS 607
I W L+ I WRAL LP A L R + P C ET +H+ EC+ +
Sbjct: 1135 IPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAA 1194
Query: 606 SALWSQVLRSIWP---HSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWVER 436
+W + P H+ F + ++ +S + + Y + +W R
Sbjct: 1195 RKIWDLAPLIVQPSKDHNQDFFSAI-------QEMWSRSSTAEAELMIVYCWV--IWSAR 1245
Query: 435 NNMIFRGKRSSVKSLWKKIADILAFKVDGEMISHPPPLHSPNNFIATRWKISISHNVGIS 256
N IF GK+S + L K +L + +S P +H + + K
Sbjct: 1246 NKFIFEGKKSDSRFLAAKADSVLKAY---QRVSKPGNVHGAKDRGIDQQK---------- 1292
Query: 255 SWWSPPSQGMAKLNTDG--SLKGHNMGYGGIIRDCRGSPILAYAGQ-K*GNLVIEAECFA 85
W PPSQ + KLN D S K +G G I+RD G + Q + V AE A
Sbjct: 1293 --WKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEA 1350
Query: 84 LFRGLSFLRQAGFDSAIVESDAKIVMDV 1
+ GL Q S IVESD K V+++
Sbjct: 1351 IHWGLQVANQISSSSLIVESDCKEVVEL 1378
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 82.0 bits (201), Expect = 4e-13
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 6/268 (2%)
Frame = -1
Query: 786 IIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFFECQFS 607
I W L+ I WRAL LP A L R + P C ET +H+ EC+ +
Sbjct: 448 IPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAA 507
Query: 606 SALWSQVLRSIWP---HSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWVER 436
+W + P H+ F + ++ +S + + Y + +W R
Sbjct: 508 RKIWDLAPLIVQPSKDHNQDFFSAI-------QEMWSRSSTAEAELMIVYCWV--IWSAR 558
Query: 435 NNMIFRGKRSSVKSLWKKIADILAFKVDGEMISHPPPLHSPNNFIATRWKISISHNVGIS 256
N IF GK+S + L K +L + +S P +H + + K
Sbjct: 559 NKFIFEGKKSDSRFLAAKADSVLKAY---QRVSKPGNVHGAKDRGIDQQK---------- 605
Query: 255 SWWSPPSQGMAKLNTDG--SLKGHNMGYGGIIRDCRGSPILAYAGQ-K*GNLVIEAECFA 85
W PPSQ + KLN D S K +G G I+RD G + Q + V AE A
Sbjct: 606 --WKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEA 663
Query: 84 LFRGLSFLRQAGFDSAIVESDAKIVMDV 1
+ GL Q S IVESD K V+++
Sbjct: 664 IHWGLQVANQISSSSLIVESDCKEVVEL 691
>ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
gi|462403251|gb|EMJ08808.1| hypothetical protein
PRUPE_ppa018907mg, partial [Prunus persica]
Length = 1566
Score = 79.3 bits (194), Expect = 3e-12
Identities = 72/248 (29%), Positives = 108/248 (43%), Gaps = 5/248 (2%)
Frame = -1
Query: 732 LIGKLPVASRLAA--RNIIPSPDCCLGHTCDETENHLFFECQFSSALWSQVLR--SIWPH 565
++ KL V SRL NI P C H ET NHLFFECQF+ +W ++ + PH
Sbjct: 1276 MLKKLQVRSRLYKFLPNIDPECPLCKNHM--ETINHLFFECQFAVNIWRCIIEWLASLPH 1333
Query: 564 SITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWVERNNMIFRGKRSSVKSLWK 385
+ + G +ILS + + +W RNN IF+ +
Sbjct: 1334 T--------------KAADGPNILSKALLLCW-----QIWEARNNCIFK----DIDPHPV 1370
Query: 384 KIADILA-FKVDGEMISHPPPLHSPNNFIATRWKISISHNVGISSWWSPPSQGMAKLNTD 208
++ ++ +D I+ PP S K++I W PP K+N D
Sbjct: 1371 RVLNVAGRIGLDYWKINSCPPQKSTG-------KVNIK--------WEPPPLDWVKVNFD 1415
Query: 207 GSLKGHNMGYGGIIRDCRGSPILAYAGQK*GNLVIEAECFALFRGLSFLRQAGFDSAIVE 28
GS++G+ G +IRD G+ LA + AECFAL GL+ G+ VE
Sbjct: 1416 GSMRGNLAATGFVIRDWNGNVRLAGTKNSGQVSITVAECFALRDGLAHAIHKGWRKIFVE 1475
Query: 27 SDAKIVMD 4
D+K+++D
Sbjct: 1476 GDSKLIID 1483
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 79.3 bits (194), Expect = 3e-12
Identities = 43/156 (27%), Positives = 75/156 (48%)
Frame = -1
Query: 819 QKIQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDET 640
Q + V WH +WF +H+P + W +L RL P C L + DE+
Sbjct: 978 QPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDES 1037
Query: 639 ENHLFFECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYST 460
HLFF CQFSS +WS +R++ + F L A + + ++++ K+ F+++
Sbjct: 1038 REHLFFRCQFSSEIWSFFMRALNLNPPPQFMHCLLWTLTASRDRNITLIT---KLLFHAS 1094
Query: 459 IHYVWVERNNMIFRGKRSSVKSLWKKIADILAFKVD 352
++++W ERN I + K+I I+ ++D
Sbjct: 1095 VYFIWRERNLRIHSNSVRPAHLIIKEIQLIVRARLD 1130
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 76.6 bits (187), Expect(2) = 4e-12
Identities = 68/243 (27%), Positives = 105/243 (43%), Gaps = 16/243 (6%)
Frame = -1
Query: 750 ITAWRALIGKLPVASRLAARNIIPSPD--CCLGHTCDETENHLFFECQFSSALWSQVLRS 577
I W AL+ K+ S+L IIP D C + ET NHL C+FS LW+ L +
Sbjct: 1061 IFCWLALLEKINTKSKLGRIGIIPIEDAVCVFCNIGLETTNHLLLHCEFSWKLWTWWL-N 1119
Query: 576 IWPHSITIFPILLEAQ*VAEKFQGK-SILSSLGKIAFYSTIHYVWVERNNMIFRGKRSSV 400
IW +S FP ++ + G+ + + F+ I +W ERN+ IF SS+
Sbjct: 1120 IWGYS-WAFPKSIKNAFAQWQIYGRGAFFKKIWHAIFFIIIWSLWKERNSRIFNNSNSSL 1178
Query: 399 KSLWKKIADILAFKV----DGEMISHPPPLHSPNNFIATRWKISISHNVG-------ISS 253
+ + I L + V DG + + +P +W S N G + +
Sbjct: 1179 EEIQDLILTRLCWWVKAWDDGFPFACSEVIRNP---ACLKWTQSKGCNFGTIGPTNLLKA 1235
Query: 252 WWSPPSQGMAKLNTDGSLKG--HNMGYGGIIRDCRGSPILAYAGQK*GNLVIEAECFALF 79
WSPP + N D S K + GG++RD G + ++ + AE +A+F
Sbjct: 1236 AWSPPPSNHLQWNVDASFKPGLEHAAVGGVLRDENGCFVCLFSSPIPRLEINSAEIYAIF 1295
Query: 78 RGL 70
R L
Sbjct: 1296 RAL 1298
Score = 22.3 bits (46), Expect(2) = 4e-12
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Frame = -3
Query: 1105 VGKGNGTRLWVDRWHPDGILLWPFDKNFAKTFD-----LNLHLTRGRGENC---FQDILT 950
VGKG T W + W + L F + + T + +L + G + +Q L
Sbjct: 930 VGKGTQTAFWQEIWIGELPLKTLFPRLYRLTINPLATISSLGIWDGHEWHWVLPWQRALR 989
Query: 949 --DLGLSNLWHDIETICKLYANEDDRVIWTPTANG 851
D+ + H++ L DD ++WTP +G
Sbjct: 990 PRDIEERDALHELLKDVVLDLTNDDYLVWTPNKSG 1024
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 75.5 bits (184), Expect = 4e-11
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 10/272 (3%)
Frame = -1
Query: 807 SRVAWHNI---IWFLEHIPNHSITAWRALIGKLPVASRLAARNI-IPSPDCCLGHTCDET 640
S V W + +W + P + AWR + G LP + L + + +P +C T E
Sbjct: 795 SDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCSTNVED 854
Query: 639 ENHLFFECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYST 460
HLF C+ W Q + I P + + + + E G+ + F
Sbjct: 855 SLHLFKNCEALQPFWQQGMVQIHPRTHPSISVEVWFWDMVEMLSGEKLEG------FLMA 908
Query: 459 IHYVWVERNNMIFRGKRSSVKSL--WKKIADILAFKVDGEMISHPPPLHSPNNFIATRWK 286
+ +WVERNNM++RG+ ++ ++ W + +L +K H + TR K
Sbjct: 909 LWVIWVERNNMVWRGQFYNITNMMDWSS-SLLLEYK------------HCHQRSVGTRKK 955
Query: 285 ISISHNVGISSWWSPPSQGMAKLNTDGSLKGHNMGYGG---IIRDCRGSPILAYAGQ-K* 118
S W PPS G ++N DGS H G GG +IRD +G+ + + A
Sbjct: 956 -------NKSKWTCPPS-GRLRVNIDGSF-AHEEGRGGVGVVIRDHKGACVASLARPFPN 1006
Query: 117 GNLVIEAECFALFRGLSFLRQAGFDSAIVESD 22
I E AL GL Q G+ VESD
Sbjct: 1007 AASAIHMEVEALRAGLLVCVQQGWRDVEVESD 1038
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 75.1 bits (183), Expect = 5e-11
Identities = 41/150 (27%), Positives = 70/150 (46%)
Frame = -1
Query: 801 VAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFF 622
V WH +WF H+P H+ W +L RL + +C L + D++ HLFF
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186
Query: 621 ECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWV 442
ECQFS +W S ++ L++ + + + ++AF+S ++ +W
Sbjct: 187 ECQFSGVVWRFFTAST---NLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWR 243
Query: 441 ERNNMIFRGKRSSVKSLWKKIADILAFKVD 352
ERN + G S +S+ K I I+ ++D
Sbjct: 244 ERNQRLHSGVSRSTESILKDIQLIIRARLD 273
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 75.1 bits (183), Expect = 5e-11
Identities = 41/150 (27%), Positives = 70/150 (46%)
Frame = -1
Query: 801 VAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFF 622
V WH +WF H+P H+ W +L RL + +C L + D++ HLFF
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186
Query: 621 ECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWV 442
ECQFS +W S ++ L++ + + + ++AF+S ++ +W
Sbjct: 187 ECQFSGVVWRFFTAST---NLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWR 243
Query: 441 ERNNMIFRGKRSSVKSLWKKIADILAFKVD 352
ERN + G S +S+ K I I+ ++D
Sbjct: 244 ERNQRLHSGVSRSTESILKDIQLIIRARLD 273
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 75.1 bits (183), Expect = 5e-11
Identities = 41/150 (27%), Positives = 70/150 (46%)
Frame = -1
Query: 801 VAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFF 622
V WH +WF H+P H+ W +L RL + +C L + D++ HLFF
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186
Query: 621 ECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWV 442
ECQFS +W S ++ L++ + + + ++AF+S ++ +W
Sbjct: 187 ECQFSGVVWRFFTAST---NLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWR 243
Query: 441 ERNNMIFRGKRSSVKSLWKKIADILAFKVD 352
ERN + G S +S+ K I I+ ++D
Sbjct: 244 ERNQRLHSGVSRSTESILKDIQLIIRARLD 273
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 74.7 bits (182), Expect = 7e-11
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Frame = -1
Query: 801 VAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFF 622
V W +WF + IP H+ W A +L RL + C L + DET +HLFF
Sbjct: 152 VPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFF 211
Query: 621 ECQFSSALWS-QVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVW 445
+CQFS+ +WS ++R+ PILL + LS + K+ F ++++ +W
Sbjct: 212 QCQFSNEIWSFFMIRAGMTPPHLFGPILL----WLKSASSSKNLSLIIKLLFQASVYLIW 267
Query: 444 VERNNMIFRGKRSSVKSLWKKIADILAFKVDGEMISHPPPLHSPNNFIATRWKI 283
ERN I + ++ K++ ++ ++D P L S ++ +AT +++
Sbjct: 268 RERNCRIHTTHSRTPPTIIKEVQQLIRARLDPICRERPVGL-SRSSLLATWFEL 320
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 72.8 bits (177), Expect(2) = 1e-10
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Frame = -1
Query: 819 QKIQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDET 640
+K + VAW+ +WF P + W AL +L R+ N C T ET
Sbjct: 454 RKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIET 513
Query: 639 ENHLFFECQFSSALWSQVLRSIWPHSI-----TIFPILLEAQ*VAEKFQGKSILSSLGKI 475
+HLFF C ++SA+W+ + +++ H TI + E Q I S L +
Sbjct: 514 RDHLFFSCSYASAIWTAIAKNVLQHRFSTDWQTIVNYISET-------QTDRIRSFLSRY 566
Query: 474 AFYSTIHYVWVERNN 430
F T+H VW ERN+
Sbjct: 567 IFQLTVHTVWKERND 581
Score = 21.2 bits (43), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 848 FSFKFVWNVVRKSNPE 801
FS K WN VRK + E
Sbjct: 444 FSTKDTWNQVRKKSNE 459
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 73.6 bits (179), Expect = 2e-10
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = -1
Query: 807 SRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHL 628
+RV WH +IWF P +S +W A G+LP R+ + DC ET +HL
Sbjct: 1052 ARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHL 1111
Query: 627 FFECQFSSALWSQVLRSIWPHSITI-FPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHY 451
FF C F+S +W + R I+ T + ++EA Q + L + F +TI+
Sbjct: 1112 FFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEA---ITNSQHHRVEWFLRRYVFQATIYI 1168
Query: 450 VWVERN 433
VW ERN
Sbjct: 1169 VWRERN 1174
>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 295
Score = 73.6 bits (179), Expect = 2e-10
Identities = 44/137 (32%), Positives = 62/137 (45%)
Frame = -1
Query: 801 VAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFF 622
V W ++WF E+IP S+ W + + +LP RL + L DET HLFF
Sbjct: 125 VPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFF 184
Query: 621 ECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWV 442
EC FS A+W P P A + +S +++ K+ S +++VW
Sbjct: 185 ECSFSLAIWEFFASKFRPSPPFGLP---AASSWILQLPLRSHSTTILKLLLQSAVYHVWK 241
Query: 441 ERNNMIFRGKRSSVKSL 391
ERN IF SS SL
Sbjct: 242 ERNARIFTSISSSASSL 258
>gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
Length = 236
Score = 72.4 bits (176), Expect = 3e-10
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = -1
Query: 813 IQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETEN 634
I V W+ +WF P +S W A++ +L R+ N S C L H ET +
Sbjct: 96 ISMDVDWYKGVWFGHSTPKYSFCVWLAVLNRLSTGDRMTHWNGGQSAACVLCHNAPETRD 155
Query: 633 HLFFECQFSSALWSQVLRSIWPHSI-TIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTI 457
HLFF C F+S +WS + R I+ T + L++A ++ + + S + F +T+
Sbjct: 156 HLFFSCDFASIVWSNLARGIYGDRFSTHWQDLIQA--ISGSWM-TPLDSFFARYLFQATV 212
Query: 456 HYVWVERNNMIFRGKRSSVKSLWK 385
H +W ERN K +S L K
Sbjct: 213 HTIWRERNGRNHGEKPNSAALLIK 236
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 72.4 bits (176), Expect = 3e-10
Identities = 73/283 (25%), Positives = 111/283 (39%), Gaps = 7/283 (2%)
Frame = -1
Query: 828 ECGQKIQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTC 649
E G K R W I F + + W + LP A LA R +P C
Sbjct: 1031 ETGGKGSWRGLWRKNIPF-----KYKLLIWNGIHNILPTALFLAKRIHNFNPQCVACDHP 1085
Query: 648 DETENHLFFECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAF 469
E HLF +C +S++W ++L+ P++ +F L + + + AF
Sbjct: 1086 IEDMIHLFRDCCVASSVWIEILKHHKPNNQNLFFNLEWEEWIDFNLNQHDYWVTKFTTAF 1145
Query: 468 YSTIHYVWVERNNMIFRGKRSSVKSLWKKI-----ADILAFKVDGEMISHPPPLHSPNNF 304
+ ++W RN +F + K + ++ +I AF+V NN
Sbjct: 1146 W----HIWCSRNKTVFECAVNHPKFTYNRVVADFFTNIRAFQV--------------NNT 1187
Query: 303 IATRWKISISHNVGISSWWSPPSQGMAKLNTDGSLKG--HNMGYGGIIRDCRGSPILAYA 130
K+ + W PP QG KLNTDG+ K N G GG+ RD G+ L +A
Sbjct: 1188 QGNGSKVVLR--------WKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFA 1239
Query: 129 GQK*GNLVIEAECFALFRGLSFLRQAGFDSAIVESDAKIVMDV 1
+ AE A+ GL + VE DAK V+ +
Sbjct: 1240 KRVDAGSPEAAELMAIREGLQVAWDCNYHKLEVECDAKGVVQL 1282
>ref|XP_006584439.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 396
Score = 59.7 bits (143), Expect(2) = 4e-10
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Frame = -1
Query: 783 IWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFFECQFSS 604
+W ++ N W LP L R++ +P CC E+ HL +C +
Sbjct: 189 MWLMKIPQNIKFFLWLTSHKSLPTKFFLVYRHLSSNPFCCRCSNQVESVLHLLRDCDKAC 248
Query: 603 ALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWVERNNMI 424
++WS P + F A+ + + K + G + F ++W +RN M
Sbjct: 249 SVWSM----FQPTLVVDF-----AEHDSSVWLHKHATCATGAL-FCLICWFIWRDRNAMT 298
Query: 423 FRGKRSSVKSLWKKIADILAFKVDGEMISHPPPLHSPNNFIATRWKISISHNVGISSWWS 244
F + W++ +A +V+ + N I+ + + + + W
Sbjct: 299 FSNEN------WQEW--FIASQVNNML-----------NIISNQQECQPRNRYTVQVAWK 339
Query: 243 PPSQGMAKLNTDGS--LKGHNMGYGGIIRDCRGSPILAYAGQK*GNLVIEAECFAL 82
PP + KLNTDGS + G+GG+IRD + I+ Y G ++AE FAL
Sbjct: 340 PPPPTVLKLNTDGSSLVNPGQSGFGGVIRDSQRDWIIGYTGSCGVTTSLQAELFAL 395
Score = 32.7 bits (73), Expect(2) = 4e-10
Identities = 29/114 (25%), Positives = 51/114 (44%)
Frame = -3
Query: 1135 DLVEPLILHLVGKGNGTRLWVDRWHPDGILLWPFDKNFAKTFDLNLHLTRGRGENCFQDI 956
+L+EP VG G+ +W DRW+P+G L D + F+L L G + ++
Sbjct: 69 ELLEPGFRFRVGTGD-MPVWYDRWNPNGFLCDMVDYVNIQDFNLTLKDVYENGMWLWNNM 127
Query: 955 LTDLGLSNLWHDIETICKLYANEDDRVIWTPTANGNSLSSLCGMWSENPIPSSL 794
T + S + + ++ L + D VIW+ N ++ W ++ SL
Sbjct: 128 ATIIP-SQVPQEFNSLF-LNSTIADTVIWSAAQNHVFMAKTAYWWLQSQANVSL 179
>ref|XP_007018598.1| Uncharacterized protein TCM_034780 [Theobroma cacao]
gi|508723926|gb|EOY15823.1| Uncharacterized protein
TCM_034780 [Theobroma cacao]
Length = 398
Score = 72.0 bits (175), Expect = 4e-10
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 25/297 (8%)
Frame = -1
Query: 831 VECGQKIQSRVAWHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIP--SPDCCLG 658
+ C I + +W P + W+ L+GK+ V L R +I + C L
Sbjct: 58 IHCQSNIWASQPHWRQLWKGHAPPKIEVFTWQVLLGKVAVKHELFKRGLIDINTSFCTLC 117
Query: 657 HTCDETENHLFFECQFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKF-----QGKSIL 493
+ ET +HLFF C S W+ IW H+ +++ + A F K
Sbjct: 118 NAELETSSHLFFTC---SVAWN-----IWMHNCSLWGLSWVHPGDATSFFVSWQNNKPPY 169
Query: 492 SS--LGKIAFYSTIHYVWVERNNMIFRGKRSSVKSLWKKIADILAFKVDGEM-ISHPPPL 322
S + + F+ST+ +W+ RN ++F+GK V L I LA G+ ++H P
Sbjct: 170 GSPEIWHMLFFSTLWSIWLCRNEILFQGKHLDVNQLQDIILVRLAHWCKGKWPVNHIPAS 229
Query: 321 HSPNNFIATRWKISIS----HNVGISSWWSPPSQGMAKLNTDGSLKGH--NMGYGGIIRD 160
H F+ +I I+ + SW PP+ G KLN DGS G G G IRD
Sbjct: 230 H----FLFEPSRICINSRKCKTKVVCSWMRPPT-GSFKLNVDGSALGKPGPTGIRGAIRD 284
Query: 159 CR-------GSPILAYAGQK*GNLVIEAECFALFRGLSFLRQAGFDSAI--VESDAK 16
+PI G + N AE A+ GLSF + + S+ VESD+K
Sbjct: 285 HESFIKGVFSTPI----GMEDSNY---AEFLAIKEGLSFFFSSPWASSTLHVESDSK 334
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 72.0 bits (175), Expect = 4e-10
Identities = 38/124 (30%), Positives = 61/124 (49%)
Frame = -1
Query: 795 WHNIIWFLEHIPNHSITAWRALIGKLPVASRLAARNIIPSPDCCLGHTCDETENHLFFEC 616
W +WF +P H+ W + + +LP RLAA + + DCCL + E+ +HL C
Sbjct: 922 WTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSRPESRDHLLLYC 981
Query: 615 QFSSALWSQVLRSIWPHSITIFPILLEAQ*VAEKFQGKSILSSLGKIAFYSTIHYVWVER 436
FS+ +W V + P S IF E + S L KIA +++ ++W +R
Sbjct: 982 VFSAVIWKLVFFRLTP-SQAIFNSWAELL-SWTRINSSKAPSLLRKIAAQASVFHLWKQR 1039
Query: 435 NNMI 424
NN++
Sbjct: 1040 NNVL 1043