BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00013873
         (315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine...    58   2e-06
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...    58   2e-06
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...    57   3e-06
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...    57   3e-06
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...    56   5e-06
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...    54   6e-06
ref|XP_002516391.1| ribosomal large subunit pseudouridine syntha...    55   8e-06

>ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 2 [Vitis vinifera]
          Length = 335

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 PEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKKK 2
           P+  + +LL+PWIVR ENG+++VQS PP R+L  MA A   + KKKKK
Sbjct: 64  PKPQSETLLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKK 111


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 PEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKKK 2
           P+  + +LL+PWIVR ENG+++VQS PP R+L  MA A   + KKKKK
Sbjct: 64  PKPQSETLLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKK 111


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 33/42 (78%)
 Frame = -3

Query: 130 NSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKK 5
           + L +PWI+RG++G++K+QS PPAR LHAMA+A     KKKK
Sbjct: 76  SQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKK 117


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
           gi|557112308|gb|ESQ52592.1| hypothetical protein
           EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = -3

Query: 163 TKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKKK 2
           T  + +       L +PWIVRGE+G +KVQS PPAR +HA+A+A     KKK K
Sbjct: 58  TPSSTRGGAGVQQLFIPWIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDK 111


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
           gi|550332354|gb|EEE89362.2| hypothetical protein
           POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 124 LLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKKK 2
           L +PWIVRGE+G++K+QS PPAR +HA+A+A     KKK K
Sbjct: 71  LFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDK 111


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
           gi|462414524|gb|EMJ19261.1| hypothetical protein
           PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score = 53.5 bits (127), Expect(2) = 6e-06
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -3

Query: 145 PEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMKKKK 5
           PE     L++PWIVRGE+G++K+QS PPARFL A+      T KKK+
Sbjct: 70  PEALAGQLIIPWIVRGEDGNLKLQSHPPARFLQAI-ETKSKTKKKKE 115



 Score = 21.9 bits (45), Expect(2) = 6e-06
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 285 ISSSLFTKPNLLVCRTNLRRISVLTC 208
           +SSSLF+KP+L +    +R +  +TC
Sbjct: 12  LSSSLFSKPSLSL--IPIRTLPRITC 35


>ref|XP_002516391.1| ribosomal large subunit pseudouridine synthase B, putative [Ricinus
           communis] gi|223544489|gb|EEF46008.1| ribosomal large
           subunit pseudouridine synthase B, putative [Ricinus
           communis]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/84 (34%), Positives = 42/84 (50%)
 Frame = -3

Query: 253 PRLQNKPQKNFSPHLFEY*FIFVFXXXXXATKETLKPEQATNSLLVPWIVRGENGDVKVQ 74
           PR+      + S    E+   F        +   L        L +PWIVRGE+G++K+Q
Sbjct: 33  PRITCSSSSSSSSSSLEFNISFAPPKPKPKSPPQLDLSDQEGQLFIPWIVRGEDGNLKLQ 92

Query: 73  SGPPARFLHAMANAMDATMKKKKK 2
           S PPAR +HA+A+A     KK+ K
Sbjct: 93  SHPPARLIHALADAKTHNTKKQNK 116