BLASTX nr result

ID: Cocculus22_contig00013639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00013639
         (291 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB53954.1| ATP-dependent helicase 1 [Morus notabilis]              68   1e-09
ref|XP_003631348.1| PREDICTED: helicase SWR1-like [Vitis vinifer...    60   3e-07

>gb|EXB53954.1| ATP-dependent helicase 1 [Morus notabilis]
          Length = 641

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
 Frame = -3

Query: 286 PPPPSIESFSYRSSNREDFKQSELDFVQIEDSLEDEDVDVTEARPSGNRSRRFVFDD--E 113
           P PP IESFSY SS+++D    + D + + D LED+D DV + RP+  RSRRFV DD  E
Sbjct: 31  PSPPPIESFSYNSSSKQD---DDDDCLVVSDDLEDDDADVEKVRPA-RRSRRFVIDDDEE 86

Query: 112 SDEDFKEVHEIRST 71
           SD +  EV E++ST
Sbjct: 87  SDVELPEVVEVKST 100


>ref|XP_003631348.1| PREDICTED: helicase SWR1-like [Vitis vinifera]
           gi|297738311|emb|CBI27512.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
 Frame = -3

Query: 280 PPSIESFSYRSSNR----EDFKQ-SELDFVQIEDSLEDEDVDVTEARPSGNRSRRFVFDD 116
           PP IESFSYR  +     ED    S  D V+I++ LED+D +V  A  S  R RRFV D+
Sbjct: 31  PPPIESFSYRPEDPQVSPEDVSDGSSDDCVEIKEDLEDDDAEVLAAPVS--RGRRFVVDE 88

Query: 115 ESDEDFKEVHEIRS 74
           +SDEDF EV E++S
Sbjct: 89  DSDEDFAEVVEVKS 102


Top