BLASTX nr result
ID: Cocculus22_contig00013498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00013498
(377 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 7e-09
ref|XP_006440569.1| hypothetical protein CICLE_v10019528mg [Citr... 59 2e-08
ref|XP_006477431.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 59 2e-08
ref|XP_007040154.1| P-loop containing nucleoside triphosphate hy... 60 7e-08
ref|XP_004290722.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 57 3e-06
ref|XP_007201698.1| hypothetical protein PRUPE_ppa004386mg [Prun... 56 6e-06
ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putativ... 55 8e-06
ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Popul... 55 8e-06
ref|XP_006847799.1| hypothetical protein AMTR_s00029p00030480 [A... 55 1e-05
>ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial
[Vitis vinifera] gi|147852111|emb|CAN82264.1|
hypothetical protein VITISV_009282 [Vitis vinifera]
Length = 557
Score = 60.5 bits (145), Expect(2) = 7e-09
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -2
Query: 376 STEVKAVGVKALL*IEAAPFATNTFSEFDLPPLLIEQLETVGLTVPTKLQ 227
S E+KAVG K + IEAAPFA +FSE LPPLLI++LE G +VPT +Q
Sbjct: 86 SNEMKAVGTKKSIEIEAAPFAAKSFSELGLPPLLIDRLEREGFSVPTDVQ 135
Score = 25.0 bits (53), Expect(2) = 7e-09
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 230 AIPAISPNHDVVIQ 189
AIP I NHDVVIQ
Sbjct: 138 AIPTILKNHDVVIQ 151
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 192 SKSVLPLESASTSG-HVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTMR 16
+KSV+PLES T ++ E L P+LKHY CVTK QHKIDT+R
Sbjct: 343 AKSVIPLESLPTGPVNLLGPTSTSSSSSSLQTQAAAEGLPPVLKHYFCVTKLQHKIDTLR 402
Query: 15 RCVHA 1
RCVHA
Sbjct: 403 RCVHA 407
>ref|XP_006440569.1| hypothetical protein CICLE_v10019528mg [Citrus clementina]
gi|557542831|gb|ESR53809.1| hypothetical protein
CICLE_v10019528mg [Citrus clementina]
Length = 561
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -2
Query: 376 STEVKAVGVKALL*IEAAPFATNTFSEFDLPPLLIEQLETVGLTVPTKLQ 227
S +KA GVK L IE+APFA N+F E LPPLL+E+LE G VPT++Q
Sbjct: 89 SDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQ 138
Score = 25.4 bits (54), Expect(2) = 2e-08
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 230 AIPAISPNHDVVIQ 189
AIP+I NHDVVIQ
Sbjct: 141 AIPSILKNHDVVIQ 154
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLES--ASTSGHVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTM 19
+K+V+PLES A+ G++ +SL P LKHY CVTK QHK+DT+
Sbjct: 346 AKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTL 405
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 406 RRCVHA 411
>ref|XP_006477431.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47A-like [Citrus
sinensis]
Length = 560
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -2
Query: 376 STEVKAVGVKALL*IEAAPFATNTFSEFDLPPLLIEQLETVGLTVPTKLQ 227
S +KA GVK L IE+APFA N+F E LPPLL+E+LE G VPT++Q
Sbjct: 88 SDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQ 137
Score = 25.4 bits (54), Expect(2) = 2e-08
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 230 AIPAISPNHDVVIQ 189
AIP+I NHDVVIQ
Sbjct: 140 AIPSILKNHDVVIQ 153
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLES--ASTSGHVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTM 19
+K+V+PLES A+ G++ +SL P LKHY CVTK QHK+DT+
Sbjct: 345 AKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTL 404
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 405 RRCVHA 410
>ref|XP_007040154.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao] gi|508777399|gb|EOY24655.1|
P-loop containing nucleoside triphosphate hydrolases
superfamily protein [Theobroma cacao]
Length = 560
Score = 60.1 bits (144), Expect(2) = 7e-08
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = -2
Query: 367 VKAVGVKALL*IEAAPFATNTFSEFDLPPLLIEQLETVGLTVPTKLQ 227
VK VGVK L IE+APFA +F E LPPLL+E LET G TVPT +Q
Sbjct: 95 VKVVGVKKSLEIESAPFAAQSFPELGLPPLLLESLETAGYTVPTDVQ 141
Score = 21.9 bits (45), Expect(2) = 7e-08
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 230 AIPAISPNHDVVIQ 189
A+P + HDVVIQ
Sbjct: 144 AVPTVLKGHDVVIQ 157
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/66 (48%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLESASTSGHVXXXXXXXXXXXXXXXXXTL--ESLLPLLKHYQCVTKAQHKIDTM 19
+K V+PLES S SG V +SL P LKHY CVTK QHK+DT+
Sbjct: 346 AKKVMPLESVSPSGPVNLLRPTSSSDSSSNMQTQAASQSLPPALKHYHCVTKLQHKVDTL 405
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 406 RRCVHA 411
>ref|XP_004290722.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47B-like [Fragaria
vesca subsp. vesca]
Length = 550
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLESASTSGH--VXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTM 19
+K+V+PL+S S SG + +ESL P LKHY CVTK QHK+D +
Sbjct: 335 AKNVIPLDSISPSGPGTLPGNSISTNSTSNLQGHSAIESLPPSLKHYYCVTKLQHKVDAL 394
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 395 RRCVHA 400
>ref|XP_007201698.1| hypothetical protein PRUPE_ppa004386mg [Prunus persica]
gi|462397098|gb|EMJ02897.1| hypothetical protein
PRUPE_ppa004386mg [Prunus persica]
Length = 513
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLESASTSG--HVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTM 19
+K V+ +ES S SG ++ ++SL P LKHY CVTK QHK+DT+
Sbjct: 337 AKKVISIESISPSGPINLSGQSTSSDPSSNVQTQAAIQSLPPSLKHYYCVTKLQHKVDTL 396
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 397 RRCVHA 402
>ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549643|gb|EEF51131.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 595
Score = 55.5 bits (132), Expect = 8e-06
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 SKSVLPLES--ASTSGHVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTM 19
+K+V+PLES AS + ++SL P LKHY CVT+ QHK+DT+
Sbjct: 379 AKTVIPLESVPASRPVNASGPISSSSSNSNPQPQAAIQSLPPALKHYYCVTRIQHKVDTL 438
Query: 18 RRCVHA 1
RRCVHA
Sbjct: 439 RRCVHA 444
>ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222841004|gb|EEE78551.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 563
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -3
Query: 192 SKSVLPLES-ASTSGHVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTMR 16
+KSV+PLES A + ++ T++SL P LKHY CVT+ QHK+DT+R
Sbjct: 349 AKSVIPLESLAPGTVNLSSPTSSSNSDSNLQHQATVQSLPPALKHYYCVTRLQHKVDTLR 408
Query: 15 RCVHA 1
RCVHA
Sbjct: 409 RCVHA 413
Score = 51.6 bits (122), Expect(2) = 8e-06
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -2
Query: 376 STEVKAVGVKALL*IEAAPFATNTFSEFDLPPLLIEQLETVGLTVPTKLQ 227
S + + V VK L IE+APFA +FSE LPP LIE+LE G VPT +Q
Sbjct: 92 SNKSRVVRVKKTLEIESAPFAAKSFSELGLPPPLIERLEREGFNVPTDVQ 141
Score = 23.5 bits (49), Expect(2) = 8e-06
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 230 AIPAISPNHDVVIQ 189
AIP I NHD VIQ
Sbjct: 144 AIPTILKNHDAVIQ 157
>ref|XP_006847799.1| hypothetical protein AMTR_s00029p00030480 [Amborella trichopoda]
gi|548851104|gb|ERN09380.1| hypothetical protein
AMTR_s00029p00030480 [Amborella trichopoda]
Length = 547
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = -3
Query: 192 SKSVLPLESASTSGHVXXXXXXXXXXXXXXXXXTLESLLPLLKHYQCVTKAQHKIDTMRR 13
+K+VL L+SA G + +ESL P LKHY C+TK QHK+DT+RR
Sbjct: 334 AKTVLSLDSALALGSLSPSPSSSAITQAA-----IESLPPSLKHYYCITKLQHKVDTLRR 388
Query: 12 CVHA 1
CVHA
Sbjct: 389 CVHA 392