BLASTX nr result
ID: Cocculus22_contig00013282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00013282
(726 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 75 4e-19
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 75 1e-16
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 75 2e-15
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 71 5e-14
ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Popu... 68 1e-12
emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera] 61 1e-11
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 65 2e-11
emb|CAN77347.1| hypothetical protein VITISV_025746 [Vitis vinifera] 64 2e-11
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali... 58 7e-11
ref|XP_006577501.1| PREDICTED: uncharacterized protein LOC102669... 71 4e-10
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas... 70 6e-10
ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594... 55 7e-10
ref|XP_006490838.1| PREDICTED: uncharacterized protein LOC102624... 68 8e-10
ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778... 69 1e-09
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788... 69 1e-09
ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659... 69 1e-09
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 69 1e-09
ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803... 67 3e-09
ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661... 64 6e-09
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 65 2e-08
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 75.1 bits (183), Expect(2) = 4e-19
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -2
Query: 269 TFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+ G+YKD VLCDVVPMH GHILLGRPWQYD+RV HDG+
Sbjct: 298 SIGRYKDDVLCDVVPMHAGHILLGRPWQYDRRVTHDGY 335
Score = 46.2 bits (108), Expect(2) = 4e-19
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
NRY+F ++ + ITLVP+TP QVYEDQI+I
Sbjct: 337 NRYSFVINKRKITLVPLTPRQVYEDQINI 365
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 75.5 bits (184), Expect(2) = 1e-16
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = -2
Query: 269 TFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFK 153
+ G+YKD+VLCD+VPMH GHILLGRPWQ+D++V HDGFK
Sbjct: 459 SIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFK 497
Score = 37.7 bits (86), Expect(2) = 1e-16
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYED 79
NRY+F K+ITLVP+TP Q YED
Sbjct: 498 NRYSFXKDNKTITLVPLTPRQEYED 522
>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 75.5 bits (184), Expect(2) = 2e-15
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = -2
Query: 269 TFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFK 153
+ G+YKD+VLCD+VPMH GHILLGRPWQ+D++V HDGFK
Sbjct: 481 SIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFK 519
Score = 33.5 bits (75), Expect(2) = 2e-15
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQ 76
NRY+F + K+ITLVP+TP Q E +
Sbjct: 520 NRYSFIKNNKTITLVPLTPRQKKESE 545
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 70.9 bits (172), Expect(2) = 5e-14
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
I GKY+D++LCDV+PM GHILLGRPWQ D++VMHDGF
Sbjct: 287 IVIGKYEDEILCDVLPMEAGHILLGRPWQSDRKVMHDGF 325
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
NR++F G LV MTP++VY+DQI +
Sbjct: 327 NRHSFEFKGGKTILVSMTPHEVYQDQIHL 355
>ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Populus trichocarpa]
gi|550339140|gb|ERP61289.1| hypothetical protein
POPTR_0005s16705g [Populus trichocarpa]
Length = 397
Score = 68.2 bits (165), Expect(2) = 1e-12
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 275 RITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFK 153
R GKY DKVLCDVVPM+V H+LLGR WQ+D++ HDGFK
Sbjct: 242 RFLIGKYNDKVLCDVVPMYVTHLLLGRLWQFDRKAKHDGFK 282
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
N+Y G+ TL P++P QVYE+Q+ +
Sbjct: 283 NKYFLEKDGRVYTLAPLSPKQVYEEQMRL 311
>emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera]
Length = 537
Score = 60.8 bits (146), Expect(2) = 1e-11
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = -2
Query: 260 KYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
KY+D+VLCD+V M VGH+LLGRPW++D+ + H+GF
Sbjct: 237 KYEDEVLCDIVSMQVGHLLLGRPWKFDRHIKHNGF 271
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
N+Y+F ++ ++I LV ++P QVYEDQI +
Sbjct: 273 NKYSFMLNQRTIILVHLSPKQVYEDQIRL 301
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 65.5 bits (158), Expect(2) = 2e-11
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDG 159
I+ GKY+D VLCDV+PMH HILLGRPWQYD+ +H G
Sbjct: 469 ISIGKYQDDVLCDVIPMHACHILLGRPWQYDRDTLHHG 506
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQI 73
N+YT GK TL P+ P +VY Q+
Sbjct: 509 NKYTIHKGGKKYTLTPLAPKEVYNLQV 535
>emb|CAN77347.1| hypothetical protein VITISV_025746 [Vitis vinifera]
Length = 556
Score = 64.3 bits (155), Expect(2) = 2e-11
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -2
Query: 260 KYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
KY+D+VLCDV+PM VGH+LLG+PWQ+D V HDGF
Sbjct: 164 KYEDQVLCDVIPMQVGHLLLGQPWQFDWHVKHDGF 198
Score = 31.2 bits (69), Expect(2) = 2e-11
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQ 76
N+Y+F + ++ITLV ++P +VYE Q
Sbjct: 200 NKYSFVFNQRTITLVSLSPKEVYEYQ 225
>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
gi|7267450|emb|CAB81146.1| putative polyprotein
[Arabidopsis thaliana]
Length = 1054
Score = 58.2 bits (139), Expect(2) = 7e-11
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
++ GKY D+++CD++ M HILLGRPWQ D++V+ DGF
Sbjct: 424 LSIGKYHDEIMCDILHMDASHILLGRPWQSDRKVLQDGF 462
Score = 35.4 bits (80), Expect(2) = 7e-11
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
NR TF +G+ TL+PMT ++VY DQ+S+
Sbjct: 464 NRQTFEHNGRKTTLIPMTLHEVYLDQLSM 492
>ref|XP_006577501.1| PREDICTED: uncharacterized protein LOC102669077 [Glycine max]
Length = 461
Score = 70.9 bits (172), Expect = 4e-10
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+T G+Y DKVLCDVVPM V H+LLGRPWQYD + +HDGF
Sbjct: 385 LTIGRYNDKVLCDVVPMEVTHVLLGRPWQYDTKAVHDGF 423
>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 386
Score = 70.5 bits (171), Expect = 6e-10
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = -2
Query: 269 TFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFKIGILLL---CMVNLLPLYQ*H 99
+ GKY D++LCDVVPM GHILLGRPWQ+D+ V HDG + ++LLPL
Sbjct: 22 SIGKYNDEILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTFTFVHKKHKISLLPLSPKE 81
Query: 98 LTKCMKTKFLSKGSLRRERVKKEMSGK 18
+ + T L+RE+ KE SGK
Sbjct: 82 ICQDELTL-----KLKREKEIKEKSGK 103
>ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594621 [Solanum tuberosum]
Length = 631
Score = 54.7 bits (130), Expect(2) = 7e-10
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -2
Query: 281 SDRITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDG 159
S + + GKY ++++CDVVPM H+LLGRPWQ+ + +MH G
Sbjct: 508 SIQFSVGKYNEELVCDVVPMLAYHLLLGRPWQFGRDIMHQG 548
Score = 35.4 bits (80), Expect(2) = 7e-10
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYED 79
N+YTF + GK L P+TP QV ED
Sbjct: 551 NKYTFVIEGKKYVLAPLTPYQVSED 575
>ref|XP_006490838.1| PREDICTED: uncharacterized protein LOC102624837 [Citrus sinensis]
Length = 177
Score = 68.2 bits (165), Expect(2) = 8e-10
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 263 GKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDG 159
G+YKD+VLCDVVPMH G IL G+PWQYD+RV HDG
Sbjct: 71 GRYKDEVLCDVVPMHAGRILFGQPWQYDRRVTHDG 105
Score = 21.9 bits (45), Expect(2) = 8e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYEDQISI 67
NRY+F ++ K ITL P + + + +
Sbjct: 108 NRYSFVMNKKQITLQRWQPYTIKKKRCKV 136
>ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
max]
Length = 560
Score = 69.3 bits (168), Expect = 1e-09
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+T G+Y DKVLCDVVPM H+LLGRPWQYD + +HDGF
Sbjct: 451 LTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGF 489
>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
Length = 519
Score = 69.3 bits (168), Expect = 1e-09
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+T G+Y DKVLCDVVPM H+LLGRPWQYD + +HDGF
Sbjct: 452 LTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGF 490
>ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659640 [Glycine max]
Length = 594
Score = 69.3 bits (168), Expect = 1e-09
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+T G+Y DKVLCDVVPM H+LLGRPWQYD + +HDGF
Sbjct: 452 LTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGF 490
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 69.3 bits (168), Expect = 1e-09
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2
Query: 272 ITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+T G+Y DKVLCDVVPM H+LLGRPWQYD + +HDGF
Sbjct: 452 LTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGF 490
>ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803456 [Glycine max]
Length = 732
Score = 67.4 bits (163), Expect(2) = 3e-09
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -2
Query: 275 RITFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFK 153
+ + GKYKDK LCDVVPM H+LLGRPWQ+D++ HDG K
Sbjct: 311 QFSIGKYKDKTLCDVVPMEASHVLLGRPWQFDRKAHHDGHK 351
Score = 20.8 bits (42), Expect(2) = 3e-09
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQVYED 79
N+Y F + +TLV ++ + ++D
Sbjct: 352 NKYIFYHDNRKVTLVSLSLKEEFQD 376
>ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661110 [Glycine max]
Length = 766
Score = 63.5 bits (153), Expect(2) = 6e-09
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -2
Query: 269 TFGKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGF 156
+ GKY+D VLCDVVPM +LL RPWQYD+RVMHDGF
Sbjct: 278 SIGKYEDFVLCDVVPMEACDLLLRRPWQYDRRVMHDGF 315
Score = 23.5 bits (49), Expect(2) = 6e-09
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 153 NRYTFAVHGKSITLVPMTPNQ 91
N++TF + TL P+TP +
Sbjct: 317 NKFTFMHKDRKTTLAPLTPRE 337
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 65.1 bits (157), Expect = 2e-08
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = -2
Query: 263 GKYKDKVLCDVVPMHVGHILLGRPWQYDKRVMHDGFKIGILLLC---MVNLLPLYQ*HLT 93
GKY+D VLCDVVPM H+LLGRPWQ+D++ HDG+ + +NL+PL +
Sbjct: 433 GKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEVR 492
Query: 92 KCMKTKFLSKGSLRRERVKKEMSGKK 15
+ + R+E+ K++ +K
Sbjct: 493 EDQRKMSEKYDQERKEKEKEKEKNEK 518