BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00013247
         (465 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   221   1e-55
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   221   1e-55
ref|XP_006832834.1| hypothetical protein AMTR_s00095p00031150 [A...   216   2e-54
gb|EXB37172.1| hypothetical protein L484_013536 [Morus notabilis]     194   1e-47
ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfam...   135   6e-30
ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfam...   135   6e-30
ref|XP_006386200.1| pentatricopeptide repeat-containing family p...   133   2e-29
ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutr...   133   3e-29
ref|XP_002866341.1| pentatricopeptide repeat-containing protein ...   132   5e-29
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]     132   6e-29
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   132   6e-29
ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002320193.2| hypothetical protein POPTR_0014s09270g [Popu...   129   3e-28
ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, part...   128   7e-28
ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Caps...   128   7e-28
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_004507624.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  221 bits (562), Expect = 1e-55
 Identities = 108/155 (69%), Positives = 126/155 (81%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           IGFEGN  VK S+LDMFIKCG+MD AR+ FEE+EFKDV  WN+MVSGY S G+FK+ALK 
Sbjct: 219 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKC 278

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
             DMKL+GVKPD VTWN++I+GYAQ GQ E+AS  F EM GL+D  PNVVSWTALIAG+E
Sbjct: 279 ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           Q+G+   AL  FR+M+ E VKPNSITIAS VSACT
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT 373



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/146 (28%), Positives = 73/146 (50%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S++D + KC  ++ AR+ F  ++  D+V+WN M++GYA  G  ++A++   +MK  G
Sbjct: 400 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG 459

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           ++PD +TWN ++ G+                                     Q+G    A
Sbjct: 460 IEPDIITWNGLVTGFT------------------------------------QYGDGKAA 483

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           L+FF++M S  + PN+ TI+  ++AC
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAAC 509



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/153 (26%), Positives = 82/153 (53%)
 Frame = +1

Query: 4    GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
            G +   F+  S++DM+ +CG +  +R++F+ M  +D+V+WN+M+S Y  +G    A+  F
Sbjct: 630  GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 184  EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
            +  +  G+KP+ +T+ ++++  +  G +E+    F  MK      P V  +  ++    +
Sbjct: 690  QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 364  HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
             G  +  L+F  +M  E   PN+    S++ AC
Sbjct: 750  AGQFNETLEFIEKMPFE---PNAAVWGSLLGAC 779



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 37/184 (20%)
 Frame = +1

Query: 25   VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
            V  +++ M+  C  ++ A  +F E+  +DVV WN ++S  A +G    AL    +M L+ 
Sbjct: 536  VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595

Query: 205  VKPDCVTW-----------------------------------NSVIAGYAQKGQLEKAS 279
            V+ + VT                                    NS+I  Y + G ++K+ 
Sbjct: 596  VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 280  NCFFEMKGLEDSMP--NVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
              F       D MP  ++VSW  +I+    HG    A+  F+Q  +  +KPN IT  +++
Sbjct: 656  RIF-------DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLL 708

Query: 454  SACT 465
            SAC+
Sbjct: 709  SACS 712


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  221 bits (562), Expect = 1e-55
 Identities = 108/155 (69%), Positives = 126/155 (81%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           IGFEGN  VK S+LDMFIKCG+MD AR+ FEE+EFKDV  WN+MVSGY S G+FK+ALK 
Sbjct: 219 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKC 278

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
             DMKL+GVKPD VTWN++I+GYAQ GQ E+AS  F EM GL+D  PNVVSWTALIAG+E
Sbjct: 279 ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           Q+G+   AL  FR+M+ E VKPNSITIAS VSACT
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT 373



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/146 (28%), Positives = 73/146 (50%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S++D + KC  ++ AR+ F  ++  D+V+WN M++GYA  G  ++A++   +MK  G
Sbjct: 400 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG 459

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           ++PD +TWN ++ G+                                     Q+G    A
Sbjct: 460 IEPDIITWNGLVTGFT------------------------------------QYGDGKAA 483

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           L+FF++M S  + PN+ TI+  ++AC
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAAC 509



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/153 (26%), Positives = 82/153 (53%)
 Frame = +1

Query: 4    GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
            G +   F+  S++DM+ +CG +  +R++F+ M  +D+V+WN+M+S Y  +G    A+  F
Sbjct: 630  GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 184  EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
            +  +  G+KP+ +T+ ++++  +  G +E+    F  MK      P V  +  ++    +
Sbjct: 690  QXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 364  HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
             G  +  L+F  +M  E   PN+    S++ AC
Sbjct: 750  AGQFNETLEFIEKMPFE---PNAAVWGSLLGAC 779



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 37/184 (20%)
 Frame = +1

Query: 25   VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
            V  +++ M+  C  ++ A  +F E+  +DVV WN ++S  A +G    AL    +M L+ 
Sbjct: 536  VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595

Query: 205  VKPDCVTW-----------------------------------NSVIAGYAQKGQLEKAS 279
            V+ + VT                                    NS+I  Y + G ++K+ 
Sbjct: 596  VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 280  NCFFEMKGLEDSMP--NVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
              F       D MP  ++VSW  +I+    HG    A+  F+   +  +KPN IT  +++
Sbjct: 656  RIF-------DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLL 708

Query: 454  SACT 465
            SAC+
Sbjct: 709  SACS 712


>ref|XP_006832834.1| hypothetical protein AMTR_s00095p00031150 [Amborella trichopoda]
           gi|548837334|gb|ERM98112.1| hypothetical protein
           AMTR_s00095p00031150 [Amborella trichopoda]
          Length = 706

 Score =  216 bits (551), Expect = 2e-54
 Identities = 103/155 (66%), Positives = 127/155 (81%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           IGFEGN FV KS +DMF+ CG+MD A ++FE+++FKDVV+WNMM+SGYAS GDF++A ++
Sbjct: 285 IGFEGNQFVHKSAIDMFVSCGRMDIANKIFEKLQFKDVVSWNMMISGYASKGDFQKASEF 344

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           FE+M++AGVKPD VTWNS+I+GYAQ G  EKAS  F +M+ L+D  PNVVSWTALIAGNE
Sbjct: 345 FENMQIAGVKPDHVTWNSMISGYAQHGDCEKASEYFLKMQRLKDIRPNVVSWTALIAGNE 404

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           Q G  S AL  FR ML E  KPNSITIAS++SACT
Sbjct: 405 QSGLYSQALGIFRAMLGEGEKPNSITIASILSACT 439



 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/120 (37%), Positives = 74/120 (61%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G   +  V  +++D + K   ++ AR  F++++ KD+V+WN M+SGYA +G+ ++A K  
Sbjct: 459 GLVSDLLVSNTLVDFYSKSRDIEIARHNFDKIKKKDIVSWNAMISGYAQSGNKEEASKLL 518

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
            +M+L GV+PD VTWN +I G+ QKG    A   F+EM G   + PN ++ +  +AG  Q
Sbjct: 519 REMQLHGVEPDVVTWNGLITGFTQKGDGATALEFFYEM-GKTGNQPNSITISGALAGCAQ 577



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/118 (38%), Positives = 69/118 (58%)
 Frame = +1

Query: 109 DVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCF 288
           D++  N +V  Y+ + D + A   F+ +K    K D V+WN++I+GYAQ G  E+AS   
Sbjct: 463 DLLVSNTLVDFYSKSRDIEIARHNFDKIK----KKDIVSWNAMISGYAQSGNKEEASKLL 518

Query: 289 FEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
            EM+ L    P+VV+W  LI G  Q G  + AL+FF +M     +PNSITI+  ++ C
Sbjct: 519 REMQ-LHGVEPDVVTWNGLITGFTQKGDGATALEFFYEMGKTGNQPNSITISGALAGC 575


>gb|EXB37172.1| hypothetical protein L484_013536 [Morus notabilis]
          Length = 634

 Score =  194 bits (492), Expect = 1e-47
 Identities = 93/155 (60%), Positives = 121/155 (78%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           IGFEGN +VK+S L+MF+KCG++D AR+LFEEM+FKDV  WN+MVSGYA  G+F++AL+Y
Sbjct: 185 IGFEGNAWVKRSFLEMFVKCGRIDIARRLFEEMKFKDVFMWNIMVSGYAIKGEFRKALRY 244

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
              MKL+GV PD VTWNS+IAG+ Q  +L  A     E+   ED  P+VVSWTA+I+G E
Sbjct: 245 INAMKLSGVMPDRVTWNSLIAGFIQNRRLNVAFKYLSELSDSEDYSPDVVSWTAVISGYE 304

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           ++G+SS AL  FR+ML + V+PNS+TIASVVS CT
Sbjct: 305 KNGYSSQALSLFRKMLRKGVRPNSVTIASVVSCCT 339



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/146 (29%), Positives = 70/146 (47%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  +++D + KC  + +ARQ F+ +  KD+++WN M+SGYA  G +++ ++   +MK  G
Sbjct: 366 VSNALVDFYAKCSSLQFARQKFDNIIQKDLISWNSMLSGYALGGCYEEVVRILSEMKARG 425

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           VK D VTWN +I G+ Q G                                        A
Sbjct: 426 VKSDIVTWNGLITGFTQTGD------------------------------------GKSA 449

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           L+F  +M    +KPNS T++  ++AC
Sbjct: 450 LEFLYRMCRTSIKPNSTTLSGALTAC 475


>ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508783667|gb|EOY30923.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 779

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/147 (43%), Positives = 96/147 (65%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S++DM+ KCG++D ARQ+F     KDV+ WN +++ YA  G   +ALK F  M+L G
Sbjct: 365 VSSSIVDMYAKCGRIDCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQG 424

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           V P+  +WNSVI G+ +  QL +A   F +M+ L D  PN+++WT LI G   +G    +
Sbjct: 425 VPPNVTSWNSVILGFIRNHQLNEAKELFLQMQSL-DVHPNLITWTTLITGLAHNGFQDES 483

Query: 385 LQFFRQMLSERVKPNSITIASVVSACT 465
           +Q F++M    +KPN+I+I+SV+SACT
Sbjct: 484 VQIFQKMQESGIKPNTISISSVLSACT 510



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 30/183 (16%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G  FV  S++DM+ KCG ++ AR++F+ M  ++V+ WN M+ GY  NG  ++A+  
Sbjct: 155 VGFDGCVFVASSLIDMYGKCGALEDARKVFDGMVERNVIAWNSMIVGYMQNGRNEEAIGV 214

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKAS----------------------NCFFE 294
           F DM++ GV+P  V+ +S ++  A  G +++                        N + +
Sbjct: 215 FYDMRMEGVEPTQVSISSFLSASANLGAIDEGKQGHAIAVVGGLELDNILGSSVINFYSK 274

Query: 295 MKGLEDS--------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASV 450
           +  +ED+        + +VV+W  +I+   + G    AL     M  E ++ + +T++S+
Sbjct: 275 LGLIEDAELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSI 334

Query: 451 VSA 459
           ++A
Sbjct: 335 LTA 337



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E +  +  SV++ + K G ++ A  +F  M  KDVVTWN+M+S Y   G  ++AL   
Sbjct: 257 GLELDNILGSSVINFYSKLGLIEDAELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMC 316

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLE--KASNCFFEMKGLEDSM------------- 318
             M+L  ++ DCVT +S++   A    +E  K  +C+     L+  +             
Sbjct: 317 HLMRLENLRFDCVTLSSILTAAANSSSIEIGKEGHCYCIRNNLQSDVVVSSSIVDMYAKC 376

Query: 319 ---------------PNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                           +V+ W  L+A     GHS  AL+ F QM  + V PN  +  SV+
Sbjct: 377 GRIDCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQGVPPNVTSWNSVI 436



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/146 (26%), Positives = 81/146 (55%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  +++ M+ KCG +  A+++F+    K++  +N M+S YA +G   +AL  ++ ++ AG
Sbjct: 536 VSTALVGMYAKCGYLSQAKRVFDNTLSKELPVYNAMISCYALHGQAGEALVVYKHLEEAG 595

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           ++PD +T+ SV++  +  G + +    FF M       P++  +  +++   + G+   A
Sbjct: 596 IEPDGITFTSVLSACSHTGLINEGLEIFFYMVSKHHFRPSMEHYGCIVSLLSRSGNLDEA 655

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           ++  R M  E   P++  I S+++AC
Sbjct: 656 IRLIRAMPYE---PDAHIIGSLLAAC 678


>ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508783666|gb|EOY30922.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 836

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/147 (43%), Positives = 96/147 (65%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S++DM+ KCG++D ARQ+F     KDV+ WN +++ YA  G   +ALK F  M+L G
Sbjct: 422 VSSSIVDMYAKCGRIDCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQG 481

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           V P+  +WNSVI G+ +  QL +A   F +M+ L D  PN+++WT LI G   +G    +
Sbjct: 482 VPPNVTSWNSVILGFIRNHQLNEAKELFLQMQSL-DVHPNLITWTTLITGLAHNGFQDES 540

Query: 385 LQFFRQMLSERVKPNSITIASVVSACT 465
           +Q F++M    +KPN+I+I+SV+SACT
Sbjct: 541 VQIFQKMQESGIKPNTISISSVLSACT 567



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 30/183 (16%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G  FV  S++DM+ KCG ++ AR++F+ M  ++V+ WN M+ GY  NG  ++A+  
Sbjct: 212 VGFDGCVFVASSLIDMYGKCGALEDARKVFDGMVERNVIAWNSMIVGYMQNGRNEEAIGV 271

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKAS----------------------NCFFE 294
           F DM++ GV+P  V+ +S ++  A  G +++                        N + +
Sbjct: 272 FYDMRMEGVEPTQVSISSFLSASANLGAIDEGKQGHAIAVVGGLELDNILGSSVINFYSK 331

Query: 295 MKGLEDS--------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASV 450
           +  +ED+        + +VV+W  +I+   + G    AL     M  E ++ + +T++S+
Sbjct: 332 LGLIEDAELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSI 391

Query: 451 VSA 459
           ++A
Sbjct: 392 LTA 394



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E +  +  SV++ + K G ++ A  +F  M  KDVVTWN+M+S Y   G  ++AL   
Sbjct: 314 GLELDNILGSSVINFYSKLGLIEDAELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMC 373

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLE--KASNCFFEMKGLEDSM------------- 318
             M+L  ++ DCVT +S++   A    +E  K  +C+     L+  +             
Sbjct: 374 HLMRLENLRFDCVTLSSILTAAANSSSIEIGKEGHCYCIRNNLQSDVVVSSSIVDMYAKC 433

Query: 319 ---------------PNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                           +V+ W  L+A     GHS  AL+ F QM  + V PN  +  SV+
Sbjct: 434 GRIDCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQGVPPNVTSWNSVI 493



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/146 (26%), Positives = 81/146 (55%)
 Frame = +1

Query: 25   VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
            V  +++ M+ KCG +  A+++F+    K++  +N M+S YA +G   +AL  ++ ++ AG
Sbjct: 593  VSTALVGMYAKCGYLSQAKRVFDNTLSKELPVYNAMISCYALHGQAGEALVVYKHLEEAG 652

Query: 205  VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
            ++PD +T+ SV++  +  G + +    FF M       P++  +  +++   + G+   A
Sbjct: 653  IEPDGITFTSVLSACSHTGLINEGLEIFFYMVSKHHFRPSMEHYGCIVSLLSRSGNLDEA 712

Query: 385  LQFFRQMLSERVKPNSITIASVVSAC 462
            ++  R M  E   P++  I S+++AC
Sbjct: 713  IRLIRAMPYE---PDAHIIGSLLAAC 735


>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344175|gb|ERP63997.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 810

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/153 (41%), Positives = 98/153 (64%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G   +P V  S+L ++ KCGK+  AR+ FE M+ +D+V WN M+SGY   G+ ++A + F
Sbjct: 127 GMGSSPRVNNSILAVYSKCGKLSLARRFFESMDERDIVAWNAMMSGYCLKGEVEEAHRLF 186

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
           + M   G++P  VTWN +IAGY QKGQ + A N   +M     S P+VV+WT++I+G  Q
Sbjct: 187 DAMCEEGIEPGLVTWNILIAGYNQKGQCDVAMNLMKKMVSFGVS-PDVVAWTSMISGFAQ 245

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           +  +  AL  +++M+   V+PN +TI S +SAC
Sbjct: 246 NNRNGQALDLYKEMILAGVEPNGVTITSALSAC 278



 Score =  111 bits (277), Expect = 1e-22
 Identities = 58/154 (37%), Positives = 89/154 (57%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           + F  +  V  S++DM+ KCG++  A+ +F+ M  KD+ TWN M+ GY   G   +A   
Sbjct: 297 MSFVNDVLVGNSLIDMYSKCGQLGAAQLVFDLMSEKDLYTWNSMIGGYCQAGYCGKAYVL 356

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           F  M+ + V+P+ VTWN++I+GY Q G  ++A + F  M+   +   +  SW +LIAG  
Sbjct: 357 FTKMQKSQVQPNVVTWNTMISGYIQSGDEDQAMDLFHRMEKEGEIKRDNASWNSLIAGFM 416

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           Q      AL  FRQM S  + PN +TI S++ AC
Sbjct: 417 QIRKKDKALGIFRQMQSFCISPNPVTILSMLPAC 450



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/146 (25%), Positives = 74/146 (50%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           +  S++D + K GK++Y+R +F+ +  KD +T N M++GY  +G    AL   + M+  G
Sbjct: 477 ISNSLIDTYAKSGKIEYSRAIFDRIPSKDFITVNSMITGYVLHGCSDSALGLLDQMRELG 536

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           +KP+  T  ++I  ++  G +++    F  M      +P    + A++    + G    A
Sbjct: 537 LKPNRGTLVNIILAHSLAGMVDEGRQVFSSMTEDFQIIPASEHYAAMVDLYGRSGRLKEA 596

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           ++    M    +KP S    ++++AC
Sbjct: 597 IELIDNM---PIKPQSSVWYALLTAC 619


>ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutrema salsugineum]
           gi|557102030|gb|ESQ42393.1| hypothetical protein
           EUTSA_v10013206mg [Eutrema salsugineum]
          Length = 536

 Score =  133 bits (334), Expect = 3e-29
 Identities = 64/153 (41%), Positives = 102/153 (66%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           FE + FV  S++DM+ K G+++ AR++F ++  +D+  +N M+SGYA+N    +AL   +
Sbjct: 148 FESDAFVVSSLIDMYSKFGEVENARKVFNDLAEQDLAVFNAMISGYANNSQSDEALNLVQ 207

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
           DMKL G+KPD +TWN++IAG++  G  EK S    E+  L+   P+VVSWT++I+G   +
Sbjct: 208 DMKLLGIKPDIITWNALIAGFSHMGNEEKVSE-ILEIMCLDGHKPDVVSWTSIISGLVHN 266

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
             +  AL  F+QML+  + PNS TI +++ ACT
Sbjct: 267 FQNEKALDGFKQMLAHGLYPNSATITTLLPACT 299



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/153 (23%), Positives = 75/153 (49%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E + FV+ ++LDM+ KCG +  A  LF     K  VT+N M+  YA++G   +A++ F
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRMTPKKTTVTFNSMIFCYANHGLSDKAVELF 377

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
             M+  G K D +T+ +++   +  G  +     F  M+      P +  +  ++   + 
Sbjct: 378 NQMEAKGEKLDHLTFTAILTACSHGGLTDLGQKLFLLMQNKYRIDPRLEHYACMV---DL 434

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
            G +   ++ +  + +  ++P+     +++ AC
Sbjct: 435 LGRAGKLVEAYEMIKAMPMEPDLFAWGALLGAC 467


>ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312176|gb|EFH42600.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score =  132 bits (332), Expect = 5e-29
 Identities = 63/153 (41%), Positives = 103/153 (67%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           FE + F+  S++DM+ K G++  AR++F+++  +D+V +N M+SGYA+N    +AL   +
Sbjct: 148 FESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMISGYANNSQADEALNLVK 207

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
           DMKL G+KPD +TWN++I+G++  G  EK S    E+  L+  MP+VVSWT++I+G   +
Sbjct: 208 DMKLLGIKPDIITWNALISGFSHMGNEEKVSE-ILELMCLDGYMPDVVSWTSIISGLVHN 266

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
             +  A   F+QML+  + PNS TI +++ ACT
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATITTLLPACT 299



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 39/153 (25%), Positives = 79/153 (51%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E + FV+ ++LDM+ KCG +  A  LF +   K  VT+N M+  YA++G   +A++ F
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVELF 377

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
           + M+  G K D +T+ +++   +  G  +   N F  M+      P +  +  ++   + 
Sbjct: 378 DQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMV---DL 434

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
            G +   ++ +  M + R++P+     +++ AC
Sbjct: 435 LGRAGKLVEAYEMMKTMRMEPDLFVWGALLGAC 467


>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
          Length = 880

 Score =  132 bits (331), Expect = 6e-29
 Identities = 64/153 (41%), Positives = 101/153 (66%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           GF G+  V  S+L ++ KCGK+++AR+ FE M+ +D+V+WN ++SG+  NG  ++A + F
Sbjct: 202 GFCGSIRVINSILAVYAKCGKLNWARRFFESMDKRDLVSWNAIISGFCQNGRMEEATRLF 261

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
           + ++  G +P  VTWN +IA Y Q GQ + A     +M+ L   +P+V +WT+LI+G  Q
Sbjct: 262 DAVREEGTEPGLVTWNIMIASYNQLGQTDVAMGLMKKMESL-GIVPDVFTWTSLISGFAQ 320

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           +   + AL  F++ML   VKPN++TI S VSAC
Sbjct: 321 NNRRNQALDLFKEMLLAGVKPNAVTITSAVSAC 353



 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/154 (37%), Positives = 88/154 (57%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           IG   +  V  S++DM+ KCG+++ A+++F+ +  KDV TWN ++ GY   G   +A + 
Sbjct: 372 IGLIEDVLVGNSLIDMYSKCGELEAAQEVFDMIIEKDVFTWNSLIGGYCQAGYCGKACEL 431

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           F  M+ + V P+ +TWN +I+GY Q G  ++A + F  M+       N  SW +L+AG  
Sbjct: 432 FMKMQESDVAPNVITWNVMISGYIQNGDEDEAMDLFRRMEKDGKVKRNTASWNSLVAGYL 491

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
             G    AL  FRQM S  V PN +T+ SV+  C
Sbjct: 492 HVGEKDKALGIFRQMQSYCVIPNLVTMLSVLPTC 525



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 44/145 (30%), Positives = 80/145 (55%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S+LD + K G M Y+R +F+ M  KD++TWN +++GY  +G    AL  F+DM  +G
Sbjct: 552 VANSLLDTYAKAGNMTYSRTIFDRMLSKDIITWNSIIAGYVLHGFSNAALDLFDDMTKSG 611

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           +KP+  T+ S+I   +  G ++K    F  +    + +P +  + A++    + G    A
Sbjct: 612 LKPNRGTFLSIIYSCSLSGLVDKGRLAFSSITEDYNIVPGLEHYAAVVDLYGRPGRLGEA 671

Query: 385 LQFFRQMLSERVKPNSITIASVVSA 459
           ++F   M    V+P+S   A++++A
Sbjct: 672 MEFIENM---PVEPDSSVWAALLTA 693


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  132 bits (331), Expect = 6e-29
 Identities = 63/153 (41%), Positives = 97/153 (63%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G +G PFV  S+L ++ KCGK+  A + FE M+  +   WN ++SGY  +G  ++A + F
Sbjct: 204 GVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLF 263

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
           + M+  G++P  V+WN +IAGY Q G  + A     +M+ L  S P+VV+WT++I+G  Q
Sbjct: 264 DAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTS-PDVVTWTSMISGLAQ 322

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           +  +S AL  F  M+  RV+PN +TI+S VSAC
Sbjct: 323 NDKASKALHLFNDMILARVEPNGVTISSAVSAC 355



 Score =  112 bits (280), Expect = 5e-23
 Identities = 59/154 (38%), Positives = 88/154 (57%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF  +  V  S++DM+ KCGK++ A ++F+ M  KDV TWN M+ GY   G   +A   
Sbjct: 374 LGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHML 433

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           F  M+ +  +P+ +TWN++I GY   G  ++A + F  M+       +  SW +LI+G  
Sbjct: 434 FMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYL 493

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           Q G    AL  FRQM S  +  NS+TI SV+ AC
Sbjct: 494 QIGQKDKALSIFRQMQSFSININSVTILSVLPAC 527



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/69 (34%), Positives = 41/69 (59%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           +  S++D + K G + Y+R +F+   FKD +TWN +++GY   G    AL   + MK  G
Sbjct: 554 ITNSLIDTYAKSGNIGYSRTIFDRALFKDFITWNSLIAGYVLFGCSDAALGLVDQMKKLG 613

Query: 205 VKPDCVTWN 231
           +KP+  T++
Sbjct: 614 IKPNRSTFS 622


>ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cicer arietinum]
          Length = 548

 Score =  130 bits (326), Expect = 2e-28
 Identities = 64/154 (41%), Positives = 100/154 (64%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+ +  +   ++DM+ KCG + YA ++FEEM  +DV +W  M+ G+ + GD +QAL  
Sbjct: 142 MGFQNDVSIGNGLIDMYCKCGSISYACRVFEEMPERDVASWTSMICGFCNVGDIEQALVL 201

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           FE MKL G++P+  TWN++IA YA+ G  +KA + F E    E  +P++V+W ALI+G  
Sbjct: 202 FERMKLEGLEPNDFTWNAIIAMYARLGDSKKAFS-FMEKMKKEGFLPDLVAWNALISGFV 260

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           Q+   S A   FR+ML  R+  N +TIA+++ AC
Sbjct: 261 QNHQFSEAFNLFREMLVLRICSNQVTIAALLPAC 294



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 31/99 (31%), Positives = 59/99 (59%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           GF+ N F+  +++DM+ KCG ++ AR +F+++  K+V +WN M+  Y   G    +++ F
Sbjct: 314 GFDANVFIASALIDMYSKCGSLNNARNVFDKISCKNVASWNAMIDCYGKCGMVDSSMELF 373

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMK 300
             M+  G++P+ VT+  +++  +  G +EK    F  MK
Sbjct: 374 TKMQEEGLQPNEVTFTCILSACSHSGSVEKGLEIFTSMK 412



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEME----FKDVVTWNMMVSGYASNGDFKQA 171
           G E N F   +++ M+ + G    A    E+M+      D+V WN ++SG+  N  F +A
Sbjct: 209 GLEPNDFTWNAIIAMYARLGDSKKAFSFMEKMKKEGFLPDLVAWNALISGFVQNHQFSEA 268

Query: 172 LKYFEDM----------KLAGVKPDC-----VTWNSVIAG-------------------- 246
              F +M           +A + P C     V W   I G                    
Sbjct: 269 FNLFREMLVLRICSNQVTIAALLPACGSVGSVKWGREIHGFICRKGFDANVFIASALIDM 328

Query: 247 YAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKP 426
           Y++ G L  A N F ++     S  NV SW A+I    + G    +++ F +M  E ++P
Sbjct: 329 YSKCGSLNNARNVFDKI-----SCKNVASWNAMIDCYGKCGMVDSSMELFTKMQEEGLQP 383

Query: 427 NSITIASVVSACT 465
           N +T   ++SAC+
Sbjct: 384 NEVTFTCILSACS 396


>ref|XP_002320193.2| hypothetical protein POPTR_0014s09270g [Populus trichocarpa]
           gi|550323819|gb|EEE98508.2| hypothetical protein
           POPTR_0014s09270g [Populus trichocarpa]
          Length = 860

 Score =  129 bits (325), Expect = 3e-28
 Identities = 61/153 (39%), Positives = 100/153 (65%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G + + +V  S+LDM++K   +  ++ +F+ M+ K++V WN ++SGY+  G F  A +  
Sbjct: 349 GLDYDAYVGTSLLDMYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLL 408

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
             MK  G+KPD +TWNS++AGY+ +G  ++A     ++K +    PNVVSWTALI+G  Q
Sbjct: 409 NRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIK-ISGLTPNVVSWTALISGCSQ 467

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           +G+ S +++ F QM  E +KPNS TI+S++  C
Sbjct: 468 NGNYSESIEAFVQMQEEGIKPNSATISSLLRTC 500



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQA 171
           GF  NP    SVL   I+ G +++ +++   +       D      ++  Y  N     +
Sbjct: 314 GFRPNPRSITSVLQAVIEPGLLNFGKEIHAYVIRNGLDYDAYVGTSLLDMYVKNDCLTSS 373

Query: 172 LKYFEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIA 351
              F++MK   +    V WNS+I+GY+ KG  + A      MK  E   P++++W +L+A
Sbjct: 374 QAIFDNMKNKNI----VAWNSLISGYSFKGHFDHAKRLLNRMKE-EGIKPDLITWNSLVA 428

Query: 352 GNEQHGHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           G    GH+  AL     +    + PN ++  +++S C+
Sbjct: 429 GYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCS 466



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/147 (23%), Positives = 76/147 (51%)
 Frame = +1

Query: 22  FVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLA 201
           +V  +++D + K G ++ A ++F   E K + +WN M+ G+A NG  ++ +   + M+ A
Sbjct: 526 YVATALIDTYSKSGDLESAHKVFWSAE-KTLASWNCMIMGFAINGCGREVIALLDGMQRA 584

Query: 202 GVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSL 381
           G+ PD +T+ ++++G    G +E+   CF  M       P +  ++ +     + G+   
Sbjct: 585 GILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDE 644

Query: 382 ALQFFRQMLSERVKPNSITIASVVSAC 462
           A  F + M    +KP++    +++ +C
Sbjct: 645 AWDFIQTM---PIKPDASVWGAMLGSC 668



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/84 (32%), Positives = 50/84 (59%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +  E N  +  S++ M+ + GK+  A ++F+ M+   + +WN ++S Y++ G    A   
Sbjct: 212 LAMESNLSICNSLIIMYSRNGKIKLASRVFDSMKDHSLSSWNSIISSYSTLGYLNDAWNL 271

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYA 252
           F  M+ +G KPD +TWNS+++G A
Sbjct: 272 FCKMERSGTKPDIITWNSILSGNA 295



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/112 (29%), Positives = 59/112 (52%)
 Frame = +1

Query: 124 NMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKG 303
           N ++  Y+ NG  K A + F+ MK   +     +WNS+I+ Y+  G L  A N F +M+ 
Sbjct: 222 NSLIIMYSRNGKIKLASRVFDSMKDHSLS----SWNSIISSYSTLGYLNDAWNLFCKMER 277

Query: 304 LEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVVSA 459
              + P++++W ++++GN         L   R+M +   +PN  +I SV+ A
Sbjct: 278 -SGTKPDIITWNSILSGNAIVSSYKEVLIILRRMQAAGFRPNPRSITSVLQA 328



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
 Frame = +1

Query: 34  SVLDMFIKCGKMDYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQALKYFEDMKLA 201
           S++  +   G ++ A  LF +ME      D++TWN ++SG A    +K+ L     M+ A
Sbjct: 254 SIISSYSTLGYLNDAWNLFCKMERSGTKPDIITWNSILSGNAIVSSYKEVLIILRRMQAA 313

Query: 202 GVKPDCVTWNSVIAGYAQKGQLE----------------------------KASNCFFEM 297
           G +P+  +  SV+    + G L                               ++C    
Sbjct: 314 GFRPNPRSITSVLQAVIEPGLLNFGKEIHAYVIRNGLDYDAYVGTSLLDMYVKNDCLTSS 373

Query: 298 KGLEDSM--PNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVVS 456
           + + D+M   N+V+W +LI+G    GH   A +   +M  E +KP+ IT  S+V+
Sbjct: 374 QAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLITWNSLVA 428


>ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Glycine max]
          Length = 604

 Score =  129 bits (323), Expect = 5e-28
 Identities = 60/154 (38%), Positives = 99/154 (64%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+ +  V  +++DM+ KCG + YAR+LF+ M  +DV +W  M+ G+ + G+ +QAL  
Sbjct: 142 MGFQNDVSVANALIDMYGKCGSISYARRLFDGMRERDVASWTSMICGFCNVGEIEQALML 201

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           FE M+L G++P+  TWN++IA YA+     KA   FFE    E  +P+VV+W ALI+G  
Sbjct: 202 FERMRLEGLEPNDFTWNAIIAAYARSSDSRKAFG-FFERMKREGVVPDVVAWNALISGFV 260

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
           Q+     A + F +M+  R++PN +T+ +++ AC
Sbjct: 261 QNHQVREAFKMFWEMILSRIQPNQVTVVALLPAC 294



 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           GF+GN F+  +++DM+ KCG +  AR +F+++  K+V +WN M+  Y   G    AL  F
Sbjct: 314 GFDGNVFIASALIDMYSKCGSVKDARNVFDKIPCKNVASWNAMIDCYGKCGMVDSALALF 373

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMK---GLEDSMPNVVSWTALIAG 354
             M+  G++P+ VT+  V++  +  G + +    F  MK   G+E SM +      ++  
Sbjct: 374 NKMQEEGLRPNEVTFTCVLSACSHSGSVHRGLEIFSSMKQCYGIEASMQHYACVVDILC- 432

Query: 355 NEQHGHSSLALQFFR 399
             + G +  A +FF+
Sbjct: 433 --RSGRTEEAYEFFK 445



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQA 171
           G E N F   +++  + +      A   FE M+ +    DVV WN ++SG+  N   ++A
Sbjct: 209 GLEPNDFTWNAIIAAYARSSDSRKAFGFFERMKREGVVPDVVAWNALISGFVQNHQVREA 268

Query: 172 LKYFEDMKLAGVKPDCVT---------------WNSVIAGY-AQKG----------QLEK 273
            K F +M L+ ++P+ VT               W   I G+  +KG           ++ 
Sbjct: 269 FKMFWEMILSRIQPNQVTVVALLPACGSAGFVKWGREIHGFICRKGFDGNVFIASALIDM 328

Query: 274 ASNC--FFEMKGLEDSMP--NVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITI 441
            S C    + + + D +P  NV SW A+I    + G    AL  F +M  E ++PN +T 
Sbjct: 329 YSKCGSVKDARNVFDKIPCKNVASWNAMIDCYGKCGMVDSALALFNKMQEEGLRPNEVTF 388

Query: 442 ASVVSACT 465
             V+SAC+
Sbjct: 389 TCVLSACS 396


>ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 622

 Score =  128 bits (322), Expect = 7e-28
 Identities = 58/153 (37%), Positives = 99/153 (64%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F+ +  V  S++DM+ KC ++D A+Q+F  +  +DVV WN +++ YA  G   +A + F 
Sbjct: 415 FQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFY 474

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
            M+L G+ P+ ++WNSVI G+ + GQ+ +A + F +M+ L    PN+++WT LI+G  Q+
Sbjct: 475 QMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSL-GVQPNLITWTTLISGLTQN 533

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
              + A+ FF++ML   +KP++ TI   +SACT
Sbjct: 534 SCGNEAILFFQEMLETGIKPSTTTITCALSACT 566



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 30/183 (16%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G  FV  S++DM+ KCG ++ AR++F+ M  ++VV WN M+ GY  NG  ++A++ 
Sbjct: 211 VGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRV 270

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKAS----------------------NCFFE 294
           F +M L GV+P  V+  S+++  A    L++                        N + +
Sbjct: 271 FYEMTLEGVEPTRVSVTSLLSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSK 330

Query: 295 MKGLEDS--------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASV 450
           +  LED+          ++V+W  LIA   Q G    AL   R M SE ++ + +T+AS+
Sbjct: 331 VGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSCRLMRSEYLRFDCVTLASI 390

Query: 451 VSA 459
           ++A
Sbjct: 391 LAA 393



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E +  +  S+++ + K G ++ A  +F  M  +D+VTWN++++ Y  +G  ++AL   
Sbjct: 313 GMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSC 372

Query: 184 EDMKLAGVKPDCVTWNSVIAGYA--QKGQLEKASNCFFEMKGLEDS-------------- 315
             M+   ++ DCVT  S++A  A  +  +L K  +C+      +                
Sbjct: 373 RLMRSEYLRFDCVTLASILAAAADTRNIKLGKEGHCYCIRNNFQSDVVVASSIVDMYAKC 432

Query: 316 --------------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                         + +VV W  L+A     G S  A + F QM  E + PN I+  SV+
Sbjct: 433 ERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI 492



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F  N +V+  ++  + KC  +D A +LF  +  K+V +W  ++      G  ++AL  F 
Sbjct: 112 FARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFV 171

Query: 187 DMKLAGVKPD----------------------------------CV-TWNSVIAGYAQKG 261
           +MK  GV PD                                  CV   +S+I  Y + G
Sbjct: 172 EMKEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCG 231

Query: 262 QLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITI 441
            LE+A   F  M        NVV+W ++I G  Q+G +  A++ F +M  E V+P  +++
Sbjct: 232 DLEEARKVFDGM-----IARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSV 286

Query: 442 ASVVSA 459
            S++SA
Sbjct: 287 TSLLSA 292


>ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 840

 Score =  128 bits (322), Expect = 7e-28
 Identities = 58/153 (37%), Positives = 99/153 (64%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F+ +  V  S++DM+ KC ++D A+Q+F  +  +DVV WN +++ YA  G   +A + F 
Sbjct: 415 FQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFY 474

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
            M+L G+ P+ ++WNSVI G+ + GQ+ +A + F +M+ L    PN+++WT LI+G  Q+
Sbjct: 475 QMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSL-GVQPNLITWTTLISGLTQN 533

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
              + A+ FF++ML   +KP++ TI   +SACT
Sbjct: 534 SCGNEAILFFQEMLETGIKPSTTTITCALSACT 566



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 30/183 (16%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G  FV  S++DM+ KCG ++ AR++F+ M  ++VV WN M+ GY  NG  ++A++ 
Sbjct: 211 VGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRV 270

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKAS----------------------NCFFE 294
           F +M L GV+P  V+  S+++  A    L++                        N + +
Sbjct: 271 FYEMTLEGVEPTRVSVTSLLSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSK 330

Query: 295 MKGLEDS--------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASV 450
           +  LED+          ++V+W  LIA   Q G    AL   R M SE ++ + +T+AS+
Sbjct: 331 VGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSCRLMRSEYLRFDCVTLASI 390

Query: 451 VSA 459
           ++A
Sbjct: 391 LAA 393



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 37/143 (25%), Positives = 77/143 (53%)
 Frame = +1

Query: 34   SVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKP 213
            S++DM+ KCG +  A+++F+    K++  +N M+SGYA +G   +AL  F++++  G+ P
Sbjct: 595  SLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDP 654

Query: 214  DCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQF 393
            D +T+ +++   +  G + +    F  M       P++  +  ++    + G+   AL  
Sbjct: 655  DSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEAL-- 712

Query: 394  FRQMLSERVKPNSITIASVVSAC 462
             R +L+    P++  I S++S C
Sbjct: 713  -RVILTMPCDPDAHIIGSLLSTC 734



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E +  +  S+++ + K G ++ A  +F  M  +D+VTWN++++ Y  +G  ++AL   
Sbjct: 313 GMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSC 372

Query: 184 EDMKLAGVKPDCVTWNSVIAGYA--QKGQLEKASNCFFEMKGLEDS-------------- 315
             M+   ++ DCVT  S++A  A  +  +L K  +C+      +                
Sbjct: 373 RLMRSEYLRFDCVTLASILAAAADTRNIKLGKEGHCYCIRNNFQSDVVVASSIVDMYAKC 432

Query: 316 --------------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                         + +VV W  L+A     G S  A + F QM  E + PN I+  SV+
Sbjct: 433 ERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI 492



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F  N +V+  ++  + KC  +D A +LF  +  K+V +W  ++      G  ++AL  F 
Sbjct: 112 FARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFV 171

Query: 187 DMKLAGVKPD----------------------------------CV-TWNSVIAGYAQKG 261
           +MK  GV PD                                  CV   +S+I  Y + G
Sbjct: 172 EMKEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCG 231

Query: 262 QLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITI 441
            LE+A   F  M        NVV+W ++I G  Q+G +  A++ F +M  E V+P  +++
Sbjct: 232 DLEEARKVFDGM-----IARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSV 286

Query: 442 ASVVSA 459
            S++SA
Sbjct: 287 TSLLSA 292


>ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, partial [Citrus clementina]
           gi|557554259|gb|ESR64273.1| hypothetical protein
           CICLE_v10010814mg, partial [Citrus clementina]
          Length = 830

 Score =  128 bits (322), Expect = 7e-28
 Identities = 58/153 (37%), Positives = 99/153 (64%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F+ +  V  S++DM+ KC ++D A+Q+F  +  +DVV WN +++ YA  G   +A + F 
Sbjct: 415 FQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFY 474

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
            M+L G+ P+ ++WNSVI G+ + GQ+ +A + F +M+ L    PN+++WT LI+G  Q+
Sbjct: 475 QMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSL-GVQPNLITWTTLISGLTQN 533

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
              + A+ FF++ML   +KP++ TI   +SACT
Sbjct: 534 SCGNEAILFFQEMLETGIKPSTTTITCALSACT 566



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 30/183 (16%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G  FV  S++DM+ KCG ++ AR++F+ M  ++VV WN M+ GY  NG  ++A++ 
Sbjct: 211 VGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRV 270

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKAS----------------------NCFFE 294
           F +M L GV+P  V+  S+++  A    L++                        N + +
Sbjct: 271 FYEMTLEGVEPTRVSVTSLLSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSK 330

Query: 295 MKGLEDS--------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASV 450
           +  LED+          ++V+W  LIA   Q G    AL   R M SE ++ + +T+AS+
Sbjct: 331 VGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSCRLMRSEYLRFDCVTLASI 390

Query: 451 VSA 459
           ++A
Sbjct: 391 LAA 393



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 37/143 (25%), Positives = 77/143 (53%)
 Frame = +1

Query: 34   SVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKP 213
            S++DM+ KCG +  A+++F+    K++  +N M+SGYA +G   +AL  F++++  G+ P
Sbjct: 595  SLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDP 654

Query: 214  DCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLALQF 393
            D +T+ +++   +  G + +    F  M       P++  +  ++    + G+   AL  
Sbjct: 655  DSITFTNILNACSHAGLVNEGLELFVGMVSDHQVKPSMEHFGCVVNLLSRCGNLDEAL-- 712

Query: 394  FRQMLSERVKPNSITIASVVSAC 462
             R +L+    P++  I S++S C
Sbjct: 713  -RVILTMPCDPDAHIIGSLLSTC 734



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E +  +  S+++ + K G ++ A  +F  M  +D+VTWN++++ Y  +G  ++AL   
Sbjct: 313 GMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQVEKALNSC 372

Query: 184 EDMKLAGVKPDCVTWNSVIAGYA--QKGQLEKASNCFFEMKGLEDS-------------- 315
             M+   ++ DCVT  S++A  A  +  +L K  +C+      +                
Sbjct: 373 RLMRSEYLRFDCVTLASILAAAADTRNIKLGKEGHCYCIRNNFQSDVVVASSIVDMYAKC 432

Query: 316 --------------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                         + +VV W  L+A     G S  A + F QM  E + PN I+  SV+
Sbjct: 433 ERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI 492


>ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Capsella rubella]
           gi|482550819|gb|EOA15013.1| hypothetical protein
           CARUB_v10028363mg [Capsella rubella]
          Length = 534

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/153 (39%), Positives = 100/153 (65%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           FE + F+  S++DM+   G++  A+++F+++   D+V +N M+SGYA+N    +AL   +
Sbjct: 148 FESDAFIVSSLIDMYSNFGELGNAKKVFDDLGEHDLVVFNAMISGYANNRQSDEALSLIK 207

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
           DMKL G+KPD +TWN++++G+A  G  E+ S    EM  LE   P+VVSWT++I+G   +
Sbjct: 208 DMKLLGIKPDIITWNALLSGFAHTGNEEQVSE-ILEMMCLEGHKPDVVSWTSIISGLVHN 266

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
             +  A   F+QML+  + PNS TI +++ ACT
Sbjct: 267 FQNGKAFDAFKQMLTHGLYPNSATITTLLPACT 299



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/153 (23%), Positives = 77/153 (50%)
 Frame = +1

Query: 4   GFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYF 183
           G E + FV+ ++LDM+ KCG +  A  LF +   K  VT+N M+  YA++G   +A++ F
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMMFCYANHGLSDKAVELF 377

Query: 184 EDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQ 363
             M+  G K D +T+ +++   +  G  +     F  M+      P +  +  ++   + 
Sbjct: 378 NQMEDTGEKLDHLTFTAILTACSHAGLTDLGQKLFHSMQSKYRINPRLEHYACMV---DL 434

Query: 364 HGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
            G +   ++ +  + + +++P+     +++ AC
Sbjct: 435 IGRAGKLVEAYEMIKAMQMEPDLFVWGALLGAC 467


>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Solanum tuberosum]
          Length = 884

 Score =  127 bits (320), Expect = 1e-27
 Identities = 60/146 (41%), Positives = 91/146 (62%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           V  S+L ++ KCG +D A+++FE  E +D V+WN ++  Y   GD  +A +    M+L G
Sbjct: 212 VNNSLLAVYAKCGLLDCAKRIFESTEMRDTVSWNSIIMAYCHKGDIVEARRLLNLMRLEG 271

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           V+P  +TWN +IA Y Q G+ ++A     EM+G    MP+V +WT LI+G  QH  +S A
Sbjct: 272 VEPGLITWNILIASYNQLGRCDEALEVMKEMEG-NGIMPDVFTWTCLISGMSQHNRNSRA 330

Query: 385 LQFFRQMLSERVKPNSITIASVVSAC 462
           L+ FR+M+   V P+ +T+ S VSAC
Sbjct: 331 LELFREMILNGVTPSEVTLTSTVSAC 356



 Score =  115 bits (287), Expect = 8e-24
 Identities = 57/154 (37%), Positives = 90/154 (58%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +GF+G   V  +++D++ KCGK++ AR +F+ +  KDV +WN ++ GY   G   +A   
Sbjct: 375 LGFDGGVIVGNALVDLYSKCGKLEAARLVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDL 434

Query: 181 FEDMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNE 360
           F  M    V P+ +TWN +I G+ Q G  ++A + F+ M+   +   +  SW ALIAG  
Sbjct: 435 FMKMHEFDVSPNVITWNVLITGHMQNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYL 494

Query: 361 QHGHSSLALQFFRQMLSERVKPNSITIASVVSAC 462
            +G    AL  FR+M S   KPN++TI S++ AC
Sbjct: 495 HNGQKDKALGIFRKMQSFGFKPNTVTILSILPAC 528



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/130 (27%), Positives = 69/130 (53%)
 Frame = +1

Query: 25  VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
           +  S++D + K G + Y++ +F+ M  KD+++WN +++GY  +G   +A K F  M+ AG
Sbjct: 555 IANSLIDTYSKSGGLQYSKTIFDGMSTKDIISWNTLIAGYVLHGFSSEATKLFHQMEEAG 614

Query: 205 VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
           +KP+  T++S+I+ Y     +E+    F  M      +P +  + A++    + G    A
Sbjct: 615 LKPNRGTFSSMISSYGLAKMVEEGKRMFSSMYEEYRIVPGLEHYVAMVTLYGRSGKLEEA 674

Query: 385 LQFFRQMLSE 414
           + F   M  E
Sbjct: 675 IDFIDNMTME 684



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 40/173 (23%)
 Frame = +1

Query: 61  GKMDYARQLFEEMEF-----KDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVT 225
           G  D A  LF  ME      +D  +WN +++GY  NG   +AL  F  M+  G KP+ VT
Sbjct: 461 GDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKALGIFRKMQSFGFKPNTVT 520

Query: 226 W-----------------------------------NSVIAGYAQKGQLEKASNCFFEMK 300
                                               NS+I  Y++ G L+ +   F  M 
Sbjct: 521 ILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYSKTIFDGM- 579

Query: 301 GLEDSMPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVVSA 459
               S  +++SW  LIAG   HG SS A + F QM    +KPN  T +S++S+
Sbjct: 580 ----STKDIISWNTLIAGYVLHGFSSEATKLFHQMEEAGLKPNRGTFSSMISS 628


>ref|XP_004507624.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cicer arietinum]
          Length = 858

 Score =  127 bits (320), Expect = 1e-27
 Identities = 64/153 (41%), Positives = 96/153 (62%)
 Frame = +1

Query: 7   FEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFE 186
           F+ +  V   ++DM+ KCG+MD AR++F     KD+V WN M++  A  G   +ALK F 
Sbjct: 416 FDSDVVVLSGIVDMYAKCGRMDCARRVFGFAAKKDIVLWNTMLAACAEKGLIGEALKLFF 475

Query: 187 DMKLAGVKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQH 366
            M+L  + P+ V+WNS+I G+ + GQ+ +A N F EM+     MPN+++WT +I+G  Q+
Sbjct: 476 QMQLESIPPNVVSWNSLIFGFFRNGQVVEAQNMFSEMQS-SGIMPNLITWTTMISGLAQN 534

Query: 367 GHSSLALQFFRQMLSERVKPNSITIASVVSACT 465
           G    A   FRQM    ++PNSI+I S +SACT
Sbjct: 535 GLGYEANMVFRQMQDVGMRPNSISITSALSACT 567



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/146 (27%), Positives = 75/146 (51%)
 Frame = +1

Query: 25   VKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAG 204
            +  S++DM+ KCG +D A+++F+    K++  +N M+S YAS+G   +AL  F +M   G
Sbjct: 593  ITTSIMDMYAKCGNLDDAKRVFDTCLIKELPVYNAMISAYASHGKSAEALALFREMVKEG 652

Query: 205  VKPDCVTWNSVIAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAGNEQHGHSSLA 384
            + PD +T+ SV++  +    L++    F  M       P+   +  L+      G    A
Sbjct: 653  IVPDDITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEEHFGCLVKLLANDGQLDEA 712

Query: 385  LQFFRQMLSERVKPNSITIASVVSAC 462
            L+    + S    P++  + S+++AC
Sbjct: 713  LRIIFTLPS---PPDAHILGSLLAAC 735



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 66/218 (30%)
 Frame = +1

Query: 1   IGFEGNPFVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKY 180
           +G E    +  S+++ + K G ++    +F  +  KD VTWN+M+S Y   G F++AL+ 
Sbjct: 313 MGLELGNILGSSIMNFYSKVGLIEEVELVFRNIIVKDAVTWNLMISSYVQFGMFEKALEM 372

Query: 181 FEDMKLAGVKPDCVTWNS-------------------------------VIAG----YAQ 255
              MK   +  DCVT +S                               V++G    YA+
Sbjct: 373 CHSMKYESLSFDCVTLSSLLVVAADTRDVGLGKKVHGFCIRNEFDSDVVVLSGIVDMYAK 432

Query: 256 KGQLEKASNCF-------------------------------FEMKGLEDSMPNVVSWTA 342
            G+++ A   F                               F+M+ LE   PNVVSW +
Sbjct: 433 CGRMDCARRVFGFAAKKDIVLWNTMLAACAEKGLIGEALKLFFQMQ-LESIPPNVVSWNS 491

Query: 343 LIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVVS 456
           LI G  ++G    A   F +M S  + PN IT  +++S
Sbjct: 492 LIFGFFRNGQVVEAQNMFSEMQSSGIMPNLITWTTMIS 529



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
 Frame = +1

Query: 22  FVKKSVLDMFIKCGKMDYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLA 201
           +V  S+ DM+ KCG +  A ++F+ M  K+V+ WN M++ YA NG  ++A+K F +M+  
Sbjct: 219 YVATSLADMYGKCGILKDADKVFDAMPEKNVIAWNSMITVYAQNGKNEEAIKLFRNMRFQ 278

Query: 202 GVKPDCVTWN---------------------SVIAGYAQKGQLEKASNCFFEMKGLEDS- 315
            V P  VT +                     +V+ G      L  +   F+   GL +  
Sbjct: 279 CVDPSQVTLSGFFSTCANLEAIMEGKQGHALAVLMGLELGNILGSSIMNFYSKVGLIEEV 338

Query: 316 --------MPNVVSWTALIAGNEQHGHSSLALQFFRQMLSERVKPNSITIASVV 453
                   + + V+W  +I+   Q G    AL+    M  E +  + +T++S++
Sbjct: 339 ELVFRNIIVKDAVTWNLMISSYVQFGMFEKALEMCHSMKYESLSFDCVTLSSLL 392