BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00013195
         (1232 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   195   7e-99
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              195   7e-99
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,...   188   1e-88
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr...   187   2e-88
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...   178   2e-86
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun...   183   3e-86
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165...   184   3e-83
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A...   169   7e-83
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr...   180   2e-82
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps...   179   8e-82
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu...   160   8e-76
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas...   168   6e-74
ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas...   168   6e-74
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu...   154   7e-74
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...   171   7e-74
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...   154   8e-73
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,...   154   8e-73
ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,...   150   7e-72
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,...   165   9e-72
ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca...   171   9e-72

>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  195 bits (495), Expect(2) = 7e-99
 Identities = 102/158 (64%), Positives = 124/158 (78%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           S+CEMVAK+AEA  VL+RRL R PT +EIA  +DV+VS VRL+ ERSR PIS+D+    Q
Sbjct: 269 SICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQ 328

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQEII GP+ET P+ MV ++LMKQE E+ L TL EREA ILRLYFG +GE   SFE
Sbjct: 329 GCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFE 388

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           EIGRL+ LSRERVRQI+ IAL+KLR+ S  + L++YMM
Sbjct: 389 EIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 426



 Score =  194 bits (493), Expect(2) = 7e-99
 Identities = 92/129 (71%), Positives = 112/129 (86%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +E A LE AR+R+ +TRE EPTS++WA+ VGIKR +L+K LC  RESRERIN SYRRLV 
Sbjct: 143  KEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLVV 202

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWI+QAI+RA+ANKSR
Sbjct: 203  SIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKSR 262

Query: 662  LIRLPLVMC 636
            +IRLP  +C
Sbjct: 263  IIRLPGSIC 271


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  195 bits (495), Expect(2) = 7e-99
 Identities = 102/158 (64%), Positives = 124/158 (78%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           S+CEMVAK+AEA  VL+RRL R PT +EIA  +DV+VS VRL+ ERSR PIS+D+    Q
Sbjct: 162 SICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQ 221

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQEII GP+ET P+ MV ++LMKQE E+ L TL EREA ILRLYFG +GE   SFE
Sbjct: 222 GCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFE 281

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           EIGRL+ LSRERVRQI+ IAL+KLR+ S  + L++YMM
Sbjct: 282 EIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 319



 Score =  194 bits (493), Expect(2) = 7e-99
 Identities = 92/129 (71%), Positives = 112/129 (86%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +E A LE AR+R+ +TRE EPTS++WA+ VGIKR +L+K LC  RESRERIN SYRRLV 
Sbjct: 36   KEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLVV 95

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWI+QAI+RA+ANKSR
Sbjct: 96   SIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKSR 155

Query: 662  LIRLPLVMC 636
            +IRLP  +C
Sbjct: 156  IIRLPGSIC 164


>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Citrus sinensis]
          Length = 436

 Score =  188 bits (478), Expect(2) = 1e-88
 Identities = 102/158 (64%), Positives = 122/158 (77%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SM  MVAK+AEANNVL+RRL R PT  EIA M+++ VS VRL  ER+R PISLD    D 
Sbjct: 279 SMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAITDT 338

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQ+II GP+ET PE MV K+LMKQE ++LL TLSEREA ILRL+FG DG+   S +
Sbjct: 339 GCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCK 398

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           EIGRLL LSRERVRQI  IALTKL++ +  N+L+VYM+
Sbjct: 399 EIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436



 Score =  166 bits (421), Expect(2) = 1e-88
 Identities = 81/125 (64%), Positives = 100/125 (80%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LEEARK +    E E  S + A   G+K+  ++K LC+ RES+ERI  SYR LV 
Sbjct: 153  KEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVV 212

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT YQG+GL+L+DLIQEGS+GLLRGA++F+P +GYKLSTYVYWWIKQAIIR +ANKSR
Sbjct: 213  SIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSR 272

Query: 662  LIRLP 648
             IRLP
Sbjct: 273  TIRLP 277


>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
           gi|557541154|gb|ESR52198.1| hypothetical protein
           CICLE_v10033747mg [Citrus clementina]
          Length = 436

 Score =  187 bits (476), Expect(2) = 2e-88
 Identities = 102/158 (64%), Positives = 122/158 (77%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SM  MVAK+AEANNVL+RRL R PT  EIA M+++ VS VRL  ER+R PISLD    D 
Sbjct: 279 SMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAITDT 338

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQ+II GP+ET PE MV K+LMKQE ++LL TLSEREA ILRL+FG DG+   S +
Sbjct: 339 GCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCK 398

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           EIGRLL LSRERVRQI  IALTKL++ +  N+L+VYM+
Sbjct: 399 EIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436



 Score =  166 bits (421), Expect(2) = 2e-88
 Identities = 81/125 (64%), Positives = 100/125 (80%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LEEARK +    E E  S + A   G+K+  ++K LC+ RES+ERI  SYR LV 
Sbjct: 153  KEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVV 212

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT YQG+GL+L+DLIQEGS+GLLRGA++F+P +GYKLSTYVYWWIKQAIIR +ANKSR
Sbjct: 213  SIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSR 272

Query: 662  LIRLP 648
             IRLP
Sbjct: 273  TIRLP 277


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  178 bits (451), Expect(2) = 2e-86
 Identities = 90/157 (57%), Positives = 119/157 (75%)
 Frame = -3

Query: 627 MCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQG 448
           MC ++AK+  A    N+R  R P+ +EIA M++V  S VRL+CERSR P+SLDR   DQG
Sbjct: 296 MCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTDQG 355

Query: 447 SMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEE 268
            M LQ+II GP+E  PETM+ K+LMKQE E+LL  LS+REA +LRL+FG +G+  +SFEE
Sbjct: 356 CMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSFEE 415

Query: 267 IGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           IGRLL LSRERVRQI+ IAL+KL++ S   DL++Y++
Sbjct: 416 IGRLLKLSRERVRQINSIALSKLKQTSTLEDLKLYIV 452



 Score =  169 bits (429), Expect(2) = 2e-86
 Identities = 81/129 (62%), Positives = 104/129 (80%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LE  R R  + +E EPTS + A+ + IK  +++K +C  RES+ERI  SYR LV 
Sbjct: 169  KEGAKLESERTRFTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVV 228

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            S+A++YQG+GL+L+DLIQEGS+GLLRGAEKFDP +G KLSTYVYWWI+QAIIRA+ NKSR
Sbjct: 229  SVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSR 288

Query: 662  LIRLPLVMC 636
            +IRLP  MC
Sbjct: 289  IIRLPGHMC 297


>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
           gi|462415663|gb|EMJ20400.1| hypothetical protein
           PRUPE_ppa017025mg [Prunus persica]
          Length = 440

 Score =  183 bits (464), Expect(2) = 3e-86
 Identities = 94/157 (59%), Positives = 125/157 (79%)
 Frame = -3

Query: 627 MCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQG 448
           +C M+AK+ +A N LN+R  R P+ +EIA ++ V+ S V+L+CERSRPPISLDR    +G
Sbjct: 284 VCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATVRG 343

Query: 447 SMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEE 268
           SMTLQEII GPEE  PE M+ ++LMKQE E+LL TLS+REA +LRL+FG +GE  +SFEE
Sbjct: 344 SMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEE 403

Query: 267 IGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           IGRLL LSRERVRQI+ IAL+KLR+ S  ++L++Y++
Sbjct: 404 IGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440



 Score =  164 bits (414), Expect(2) = 3e-86
 Identities = 78/129 (60%), Positives = 105/129 (81%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGARLE  R R+ + ++ EPTS + A  +G+K R+++K LC+ RES+E+I  SYR LV 
Sbjct: 157  KEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVV 216

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            S+A++YQG+GL+ +DLIQEGS+GLLRGAEKFD  + +KLSTYVYWWI+QAIIRA+ NKSR
Sbjct: 217  SVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKSR 276

Query: 662  LIRLPLVMC 636
            +IRLP  +C
Sbjct: 277  IIRLPGHVC 285


>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
           gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
           polymerase sigma factor sigD, chloroplastic; Short=Sigma
           factor D; Short=Sigma-D; AltName: Full=RNA polymerase
           sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
           Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
           factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
           RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
           gi|9758039|dbj|BAB08700.1| sigma-like factor
           [Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
           factor 4 [Arabidopsis thaliana]
          Length = 419

 Score =  184 bits (466), Expect(2) = 3e-83
 Identities = 95/156 (60%), Positives = 119/156 (76%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SM E+ AKVAEA+NVL R+L RQP+CEEIA  ++++VS VRL  ERSR P+SLDR  +  
Sbjct: 259 SMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRVASQN 318

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQEI+ GP+ETRPE MV ++ MK E EQLL +L+ RE+ +L LYFG +GE   SFE
Sbjct: 319 GRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFE 378

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 163
           EIG+ L LSRERVRQI+ IAL KLR +   NDL++Y
Sbjct: 379 EIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414



 Score =  153 bits (387), Expect(2) = 3e-83
 Identities = 77/125 (61%), Positives = 97/125 (77%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LE     +    E+E  S   A   G K+R+  + LCR +E+RE+I   YRRLV 
Sbjct: 136  KEGAKLENLGTSV---EENEMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYRRLVV 192

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWIKQAI+RA+A+KSR
Sbjct: 193  SIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSR 252

Query: 662  LIRLP 648
            L++LP
Sbjct: 253  LVKLP 257


>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
           gi|548854777|gb|ERN12687.1| hypothetical protein
           AMTR_s00025p00248060 [Amborella trichopoda]
          Length = 449

 Score =  169 bits (427), Expect(2) = 7e-83
 Identities = 90/154 (58%), Positives = 112/154 (72%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SMC  VAKV+EA+ VL  RLGR+P+ EEIA    +++S VRL+ ER R P+S+D+     
Sbjct: 290 SMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIALSRVRLVTERCRLPLSIDQPLGRH 349

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G ++L++II GPEETRPE MV ++ MK   E LL TLSERE  I+RL FG +GE  +S +
Sbjct: 350 GDISLKDIIAGPEETRPEEMVKREWMKGTMEMLLQTLSEREECIVRLQFGMNGETPKSCD 409

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLR 169
           EIGRLLNLSRERVRQIHYIAL KLR+  A   LR
Sbjct: 410 EIGRLLNLSRERVRQIHYIALAKLRQQHATQHLR 443



 Score =  167 bits (422), Expect(2) = 7e-83
 Identities = 80/129 (62%), Positives = 103/129 (79%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGARLE  R++L + R  EP+  +WA+ VG++  ++E+ L  ARE R RI  SYRRLV 
Sbjct: 164  REGARLEGIRRKLREKRGREPSRGQWAEAVGMRESSMERRLGIARECRNRITNSYRRLVV 223

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT+Y G+G++L DLIQEGS+GLLRGAE+FD  +GYKLSTYVYWWIKQAII+A+A KSR
Sbjct: 224  SIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKLSTYVYWWIKQAIIKAIATKSR 283

Query: 662  LIRLPLVMC 636
            ++RLP  MC
Sbjct: 284  IVRLPGSMC 292


>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
           gi|557100961|gb|ESQ41324.1| hypothetical protein
           EUTSA_v10013654mg [Eutrema salsugineum]
          Length = 421

 Score =  180 bits (457), Expect(2) = 2e-82
 Identities = 95/156 (60%), Positives = 117/156 (75%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SM E+ AKVAEA+NVL R+L R P+CEEIA  +++ VS VRL  ER R P+SLDR  +  
Sbjct: 261 SMWELTAKVAEASNVLTRKLKRIPSCEEIAEHLNIHVSAVRLAVERGRSPVSLDRVASLN 320

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQEI+ GP+ETRPE MV ++ MK E EQLL +L+ RE+ +L LYFG +GE   SFE
Sbjct: 321 GRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFE 380

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 163
           EIG+ L LSRERVRQI+ IALTKLR +   NDLR+Y
Sbjct: 381 EIGKSLKLSRERVRQINGIALTKLRNVHNVNDLRLY 416



 Score =  154 bits (389), Expect(2) = 2e-82
 Identities = 77/125 (61%), Positives = 97/125 (77%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LE     +    E+E  S   +   G K+R+  + LCR RE+RE+I   YRRLV 
Sbjct: 138  KEGAKLENVGTSV---EENEIVSVLLSSGKGKKKRSANEILCRRREAREKITRCYRRLVV 194

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWIKQAI+RA+A+KSR
Sbjct: 195  SIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGYKLSTYVYWWIKQAILRAIAHKSR 254

Query: 662  LIRLP 648
            L++LP
Sbjct: 255  LVKLP 259


>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
           gi|482556540|gb|EOA20732.1| hypothetical protein
           CARUB_v10001054mg [Capsella rubella]
          Length = 419

 Score =  179 bits (454), Expect(2) = 8e-82
 Identities = 92/156 (58%), Positives = 118/156 (75%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           SM E+ A+VAEA+NVL R+L RQP+CEEIA  +++ VS VRL  E+SR P+SLDR  +  
Sbjct: 259 SMWELTARVAEASNVLTRKLRRQPSCEEIAEHLNLHVSAVRLAVEKSRSPVSLDRVASQN 318

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFE 271
           G MTLQEI+ GP+ETRPE MV ++ +K E EQLL +L+ RE+ +L LYFG +GE   SFE
Sbjct: 319 GRMTLQEIVRGPDETRPEEMVKREHIKNEIEQLLGSLTARESRVLGLYFGLNGETPMSFE 378

Query: 270 EIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 163
           EIG+ L LSRERVRQI+ IAL KLR +   NDL++Y
Sbjct: 379 EIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414



 Score =  153 bits (386), Expect(2) = 8e-82
 Identities = 76/125 (60%), Positives = 97/125 (77%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA+LE         +E+E  S   +   G K+R+  + LCR +E+RE+I   YRRLV 
Sbjct: 136  KEGAKLENLGT---SAQENEMVSVLLSSGKGKKKRSANEILCRRKEAREKITRCYRRLVV 192

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWIKQAI+RA+A+KSR
Sbjct: 193  SIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSR 252

Query: 662  LIRLP 648
            L++LP
Sbjct: 253  LVKLP 257


>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
            gi|550331146|gb|ERP56881.1| hypothetical protein
            POPTR_0009s06210g [Populus trichocarpa]
          Length = 423

 Score =  160 bits (406), Expect(2) = 8e-76
 Identities = 72/122 (59%), Positives = 102/122 (83%)
 Frame = -1

Query: 1013 ARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIA 834
            AR+E AR+R+ + +E +PTS + A  + +++ +++  LC+ RESRE+I  SYRRLV SIA
Sbjct: 142  ARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIA 201

Query: 833  TAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIR 654
            T+YQ +GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWIK+AI+ A++N +R++R
Sbjct: 202  TSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVR 261

Query: 653  LP 648
            LP
Sbjct: 262  LP 263



 Score =  151 bits (382), Expect(2) = 8e-76
 Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
 Frame = -3

Query: 618 MVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMT 439
           +VAK+A ANN L+ +L R P+ +EIA ++++ VS VRL  ER R PISLD+    Q S+T
Sbjct: 269 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLT 328

Query: 438 LQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSEREAIILRLYFGFDGEITRSFEEIG 262
           LQEII GP+ET PE MV ++L+KQE E+L  T L+EREA ILRL+FG +G+  +S EEIG
Sbjct: 329 LQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIG 388

Query: 261 RLLNLSRERVRQIHYIALTKLRKISAANDLRVY 163
           RL+ LSRERVRQI   AL+KLR       L+ Y
Sbjct: 389 RLVKLSRERVRQIIGTALSKLRHKEIVEPLKAY 421


>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
           gi|561022159|gb|ESW20889.1| hypothetical protein
           PHAVU_005G023100g [Phaseolus vulgaris]
          Length = 367

 Score =  168 bits (426), Expect(2) = 6e-74
 Identities = 86/155 (55%), Positives = 119/155 (76%)
 Frame = -3

Query: 621 EMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSM 442
           EMVAKVA+ANN+L+ RL R+PT +E A +++V  S +RL+ E+SR PISLD+   D G M
Sbjct: 213 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 272

Query: 441 TLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIG 262
           TLQEII GPE+  PE MV ++LMKQE  +LL TLS+REA I+ LY+G +GE   +F+EIG
Sbjct: 273 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 332

Query: 261 RLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
            ++ LSRER+RQI+ IAL+KLR+ S  ++L+ Y++
Sbjct: 333 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 367



 Score =  137 bits (346), Expect(2) = 6e-74
 Identities = 64/90 (71%), Positives = 78/90 (86%)
 Frame = -1

Query: 917 NLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAK 738
           +L+K LC ARES+ER+   YR LV SIA  Y G+GL+L+DLIQEG+VGLLRGAEKF+P +
Sbjct: 119 SLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKFEPER 178

Query: 737 GYKLSTYVYWWIKQAIIRAVANKSRLIRLP 648
           GYKLSTYVYWWIKQA+I+A+A KSRL+RLP
Sbjct: 179 GYKLSTYVYWWIKQAMIKAIARKSRLVRLP 208


>ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
           gi|561022157|gb|ESW20887.1| hypothetical protein
           PHAVU_005G023100g [Phaseolus vulgaris]
          Length = 366

 Score =  168 bits (426), Expect(2) = 6e-74
 Identities = 86/155 (55%), Positives = 119/155 (76%)
 Frame = -3

Query: 621 EMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSM 442
           EMVAKVA+ANN+L+ RL R+PT +E A +++V  S +RL+ E+SR PISLD+   D G M
Sbjct: 212 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 271

Query: 441 TLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIG 262
           TLQEII GPE+  PE MV ++LMKQE  +LL TLS+REA I+ LY+G +GE   +F+EIG
Sbjct: 272 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 331

Query: 261 RLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
            ++ LSRER+RQI+ IAL+KLR+ S  ++L+ Y++
Sbjct: 332 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 366



 Score =  137 bits (346), Expect(2) = 6e-74
 Identities = 64/90 (71%), Positives = 78/90 (86%)
 Frame = -1

Query: 917 NLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAK 738
           +L+K LC ARES+ER+   YR LV SIA  Y G+GL+L+DLIQEG+VGLLRGAEKF+P +
Sbjct: 118 SLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKFEPER 177

Query: 737 GYKLSTYVYWWIKQAIIRAVANKSRLIRLP 648
           GYKLSTYVYWWIKQA+I+A+A KSRL+RLP
Sbjct: 178 GYKLSTYVYWWIKQAMIKAIARKSRLVRLP 207


>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
            gi|550331145|gb|ERP56880.1| hypothetical protein
            POPTR_0009s06210g [Populus trichocarpa]
          Length = 419

 Score =  154 bits (389), Expect(2) = 7e-74
 Identities = 70/120 (58%), Positives = 99/120 (82%)
 Frame = -1

Query: 1013 ARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIA 834
            AR+E AR+R+ + +E +PTS + A  + +++ +++  LC+ RESRE+I  SYRRLV SIA
Sbjct: 142  ARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIA 201

Query: 833  TAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIR 654
            T+YQ +GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWWIK+AI+ A++N +R+ R
Sbjct: 202  TSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMRR 261



 Score =  151 bits (382), Expect(2) = 7e-74
 Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
 Frame = -3

Query: 618 MVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMT 439
           +VAK+A ANN L+ +L R P+ +EIA ++++ VS VRL  ER R PISLD+    Q S+T
Sbjct: 265 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLT 324

Query: 438 LQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSEREAIILRLYFGFDGEITRSFEEIG 262
           LQEII GP+ET PE MV ++L+KQE E+L  T L+EREA ILRL+FG +G+  +S EEIG
Sbjct: 325 LQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIG 384

Query: 261 RLLNLSRERVRQIHYIALTKLRKISAANDLRVY 163
           RL+ LSRERVRQI   AL+KLR       L+ Y
Sbjct: 385 RLVKLSRERVRQIIGTALSKLRHKEIVEPLKAY 417


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 403

 Score =  171 bits (432), Expect(2) = 7e-74
 Identities = 90/154 (58%), Positives = 117/154 (75%)
 Frame = -3

Query: 618 MVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMT 439
           MVAK+AEANNVL RRL R+PT  EIA +++V+VS V+L+ ERSR PISLDR+  DQ ++ 
Sbjct: 250 MVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLI 309

Query: 438 LQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGR 259
           L+EII GP E  PE MV ++LMKQ   +LL TL +RE  I+RLYFG +GE   SFEEIG+
Sbjct: 310 LKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGK 369

Query: 258 LLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           LL LSRER+RQIH IAL+KL + +  + L+ Y++
Sbjct: 370 LLKLSRERIRQIHGIALSKLEQNTLVDSLKFYVV 403



 Score =  135 bits (339), Expect(2) = 7e-74
 Identities = 68/125 (54%), Positives = 94/125 (75%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGA++E A++R+ + +E     S +     ++  +++K L   R+S+ER+   YR LVA
Sbjct: 125  KEGAKIEVAKQRMTE-QEGNSAISRFT----LENTSVDKVLINTRKSKERLARDYRGLVA 179

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+++DLIQEG++GLL GAEKFDP +G KLSTYVYWWIKQ II+A+A KSR
Sbjct: 180  SIAAHYQGKGLSIQDLIQEGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSR 239

Query: 662  LIRLP 648
            LIRLP
Sbjct: 240  LIRLP 244


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score =  154 bits (388), Expect(2) = 8e-73
 Identities = 80/157 (50%), Positives = 113/157 (71%)
 Frame = -3

Query: 627 MCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQG 448
           M +MVA++AE NN L  +L R PT +E+A  + V +S +RL+ ERS+ PIS+++   D+ 
Sbjct: 280 MGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRS 339

Query: 447 SMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEE 268
            +TLQEI+ GP+   PE MV +KLMKQE ++LL TLS+REA IL LYFG +GEI +SFEE
Sbjct: 340 CLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEE 399

Query: 267 IGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           IG+ LNLSRE +RQ +   L+KL+K    + L+ Y++
Sbjct: 400 IGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYLV 436



 Score =  148 bits (374), Expect(2) = 8e-73
 Identities = 69/125 (55%), Positives = 96/125 (76%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +E   LE  + R+ +T+E EPT+ + A  +G K   +++ LCRARESR+R+   Y +LV 
Sbjct: 153  KEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVI 212

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+L+DL QEG++GLL+GAE+F+P +G+KLSTY YWWI+QAIIRA+  KSR
Sbjct: 213  SIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSR 272

Query: 662  LIRLP 648
            L+RLP
Sbjct: 273  LVRLP 277


>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 341

 Score =  154 bits (388), Expect(2) = 8e-73
 Identities = 80/157 (50%), Positives = 113/157 (71%)
 Frame = -3

Query: 627 MCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQG 448
           M +MVA++AE NN L  +L R PT +E+A  + V +S +RL+ ERS+ PIS+++   D+ 
Sbjct: 185 MGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRS 244

Query: 447 SMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEE 268
            +TLQEI+ GP+   PE MV +KLMKQE ++LL TLS+REA IL LYFG +GEI +SFEE
Sbjct: 245 CLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEE 304

Query: 267 IGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           IG+ LNLSRE +RQ +   L+KL+K    + L+ Y++
Sbjct: 305 IGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYLV 341



 Score =  148 bits (374), Expect(2) = 8e-73
 Identities = 69/125 (55%), Positives = 96/125 (76%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +E   LE  + R+ +T+E EPT+ + A  +G K   +++ LCRARESR+R+   Y +LV 
Sbjct: 58   KEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVI 117

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+L+DL QEG++GLL+GAE+F+P +G+KLSTY YWWI+QAIIRA+  KSR
Sbjct: 118  SIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSR 177

Query: 662  LIRLP 648
            L+RLP
Sbjct: 178  LVRLP 182


>ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Solanum lycopersicum]
          Length = 442

 Score =  150 bits (380), Expect(2) = 7e-72
 Identities = 78/158 (49%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
 Frame = -3

Query: 630 SMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQ 451
           S+ E+V K+  AN  L+R+L R P+ +EIA  + + VS VRL+ ER+R PIS+D+    Q
Sbjct: 284 SISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTTQ 343

Query: 450 GSMTLQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSEREAIILRLYFGFDGEITRSF 274
           G M+LQ II GPE+T PE  V +++MKQ+ E++L   L +REA IL+L+FG +G+  +SF
Sbjct: 344 GYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQSF 403

Query: 273 EEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYM 160
           EEIGR+L LSRER+RQI+  AL+KLR+ S  ++ ++Y+
Sbjct: 404 EEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMYI 441



 Score =  148 bits (374), Expect(2) = 7e-72
 Identities = 73/126 (57%), Positives = 97/126 (76%)
 Frame = -1

Query: 1025 EQEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLV 846
            ++E AR+E  RK + +T E + +S + A   G+  R L+K L  A+ES+++I   YR LV
Sbjct: 157  KREEARIEILRKMVEETSEIDLSSKQLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLV 216

Query: 845  ASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKS 666
             S+A +YQG+GL+L+DLIQEGS+GLL GA+KF+P KGYKLSTY YWWI+QAI RAVANKS
Sbjct: 217  VSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKS 276

Query: 665  RLIRLP 648
            R+IRLP
Sbjct: 277  RVIRLP 282


>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cicer arietinum]
          Length = 407

 Score =  165 bits (417), Expect(2) = 9e-72
 Identities = 86/154 (55%), Positives = 118/154 (76%)
 Frame = -3

Query: 618 MVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMT 439
           MV K+AEA NVL++RL R+PT  E+A +++V+VS V+L+ ERSR PISLD+   DQG++T
Sbjct: 254 MVGKIAEAKNVLSKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFDQGNLT 313

Query: 438 LQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGR 259
           L+EI+ GP E  PE MV ++L KQ   +LL TL++REA ILRLYFG +GE   SFEEIG+
Sbjct: 314 LKEIMPGPVEMIPEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSFEEIGK 373

Query: 258 LLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
            L LSRER+RQIH IAL+KL++ +  + L+ Y++
Sbjct: 374 QLKLSRERIRQIHGIALSKLQQTTLVDSLKFYVV 407



 Score =  134 bits (336), Expect(2) = 9e-72
 Identities = 68/125 (54%), Positives = 89/125 (71%)
 Frame = -1

Query: 1022 QEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVA 843
            +EGAR+E ++ R+ +   +   S   A        +L+K L   RES+ER+   YR LVA
Sbjct: 128  KEGARIEVSKHRMTEHEGNSSISRRLAH----GNTSLDKVLSNTRESKERLAHEYRGLVA 183

Query: 842  SIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSR 663
            SIA  YQG+GL+ +DL QEG++GLL GAEKFDP +G KLSTYVYWWIKQAI++A+A KSR
Sbjct: 184  SIAARYQGKGLSFQDLTQEGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQAILKALARKSR 243

Query: 662  LIRLP 648
            L+RLP
Sbjct: 244  LVRLP 248


>ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488489|gb|AES69692.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 267

 Score =  171 bits (432), Expect(2) = 9e-72
 Identities = 90/154 (58%), Positives = 117/154 (75%)
 Frame = -3

Query: 618 MVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMT 439
           MVAK+AEANNVL RRL R+PT  EIA +++V+VS V+L+ ERSR PISLDR+  DQ ++ 
Sbjct: 114 MVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLI 173

Query: 438 LQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGR 259
           L+EII GP E  PE MV ++LMKQ   +LL TL +RE  I+RLYFG +GE   SFEEIG+
Sbjct: 174 LKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGK 233

Query: 258 LLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 157
           LL LSRER+RQIH IAL+KL + +  + L+ Y++
Sbjct: 234 LLKLSRERIRQIHGIALSKLEQNTLVDSLKFYVV 267



 Score =  128 bits (321), Expect(2) = 9e-72
 Identities = 60/94 (63%), Positives = 77/94 (81%)
 Frame = -1

Query: 929 IKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKF 750
           ++  +++K L   R+S+ER+   YR LVASIA  YQG+GL+++DLIQEG++GLL GAEKF
Sbjct: 15  LENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQEGTIGLLHGAEKF 74

Query: 749 DPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLP 648
           DP +G KLSTYVYWWIKQ II+A+A KSRLIRLP
Sbjct: 75  DPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 108