BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00013045
         (479 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [A...    99   5e-30
gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) ...   104   7e-29
ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    88   5e-28
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...   105   5e-21
ref|XP_006854832.1| hypothetical protein AMTR_s00063p00206020 [A...    82   2e-20
ref|XP_006842415.1| hypothetical protein AMTR_s05659p00002430 [A...    72   1e-19
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...    76   6e-12
ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arab...    51   8e-09
ref|YP_008080926.1| cytochrome oxidase subunit 2 (mitochondrion)...    64   3e-08
ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion...    44   2e-07
gb|EYU25279.1| hypothetical protein MIMGU_mgv1a023641mg, partial...    56   5e-06

>ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
           gi|548858539|gb|ERN16302.1| hypothetical protein
           AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 99.0 bits (245), Expect(2) = 5e-30
 Identities = 47/54 (87%), Positives = 48/54 (88%)
 Frame = +1

Query: 142 LALYGVPRGSSSASRREECHQLGRYWPLTTRSPAARAPRFKFVILTVSSAPPGA 303
           LALYGVP G SSAS R ECHQLGRYWPLTTRSPAARAPRF FV+L VSSAPPGA
Sbjct: 54  LALYGVPHGFSSASHRGECHQLGRYWPLTTRSPAARAPRFNFVMLIVSSAPPGA 107



 Score = 58.2 bits (139), Expect(2) = 5e-30
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +3

Query: 54  RGSPDFHRSLVRPPNEN*GPCAGVSSLRLA 143
           RGSPDFHRSLVRPPNEN GPC G+ SLRLA
Sbjct: 26  RGSPDFHRSLVRPPNENLGPCTGLLSLRLA 55


>gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) [Raphanus sativus]
          Length = 92

 Score =  104 bits (260), Expect(2) = 7e-29
 Identities = 54/69 (78%), Positives = 54/69 (78%)
 Frame = +3

Query: 195 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPSSIFSTAXXXXXXXXXXXAVI 374
           MPSTRALLATNHSLA RSGSAFQVRYPNR LCSTG LAPSSI STA           AVI
Sbjct: 1   MPSTRALLATNHSLASRSGSAFQVRYPNRPLCSTGCLAPSSILSTALLLGSLQLQPLAVI 60

Query: 375 ACFSGGSHP 401
           ACFSGGSHP
Sbjct: 61  ACFSGGSHP 69



 Score = 48.5 bits (114), Expect(2) = 7e-29
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +2

Query: 398 PRVVRLSQSGLSSRPMFPGARIKA 469
           PRVVRLSQSGL+SRPMFPGAR+KA
Sbjct: 69  PRVVRLSQSGLNSRPMFPGARVKA 92


>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 88.2 bits (217), Expect(2) = 5e-28
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 195 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPSSIFSTA 332
           MPSTRALLATNHSLAGR GSAFQVRYPNRLLCSTGSLAPSSI STA
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTA 46



 Score = 62.0 bits (149), Expect(2) = 5e-28
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +2

Query: 377 LLLGWLAPRVVRLSQSGLSSRPMFPGARIKA 469
           LLLGWLAP VVRLSQSGLSSRPMFPGAR+KA
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMFPGARVKA 90


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/59 (83%), Positives = 54/59 (91%)
 Frame = -2

Query: 448 KHRPTAEPTLAQPHHPGCEPPEKQAITASGWSSREPRSKAVEKIEEGARLPVEQRRRLG 272
           KHRPTAE TLAQPHHPGC+PP+KQ ITAS WS REPRSKAV+KI+EGARL VEQRR+LG
Sbjct: 81  KHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


>ref|XP_006854832.1| hypothetical protein AMTR_s00063p00206020 [Amborella trichopoda]
           gi|548858536|gb|ERN16299.1| hypothetical protein
           AMTR_s00063p00206020 [Amborella trichopoda]
          Length = 113

 Score = 82.0 bits (201), Expect(2) = 2e-20
 Identities = 46/74 (62%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +3

Query: 195 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPSSIFSTAXXXXXXXXXXXAVI 374
           MPSTRALLATNHSL GRS S FQ+RYPNRLLCSTGSL PSS  ST            A+I
Sbjct: 1   MPSTRALLATNHSLTGRSSSTFQLRYPNRLLCSTGSLTPSSTLSTTSLLSSLLLQLPALI 60

Query: 375 A-CFSGGS--HPGW 407
           A  F GG    P W
Sbjct: 61  ARSFLGGGAIEPQW 74



 Score = 42.7 bits (99), Expect(2) = 2e-20
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +1

Query: 403 GGAAEPEWAQQSAYVSGRTHKGMIS 477
           GGA EP+WAQ SA+VSGRT +GMI+
Sbjct: 67  GGAIEPQWAQHSAFVSGRTCRGMIT 91


>ref|XP_006842415.1| hypothetical protein AMTR_s05659p00002430 [Amborella trichopoda]
           gi|548844498|gb|ERN04090.1| hypothetical protein
           AMTR_s05659p00002430 [Amborella trichopoda]
          Length = 115

 Score = 72.4 bits (176), Expect(2) = 1e-19
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = -2

Query: 391 PPEKQAITASGWSSREPRSKAVEKIEEGARLPVEQRRRLG 272
           P +++AITASGWSSREPRS+AV+KIEEGARLPVEQRRRLG
Sbjct: 76  PKKERAITASGWSSREPRSEAVDKIEEGARLPVEQRRRLG 115



 Score = 50.1 bits (118), Expect(2) = 1e-19
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -3

Query: 477 TNHAFMRAPGNIGRLLSPLWLSRTT 403
           TNHA MRAPG IGRLLSPLWLSRTT
Sbjct: 51  TNHASMRAPGYIGRLLSPLWLSRTT 75


>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = -3

Query: 477 TNHAFMRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQ 367
           TNHAFMRAPGNIGR+ SPLWLSRTTRGASHPRSKLLQ
Sbjct: 258 TNHAFMRAPGNIGRVPSPLWLSRTTRGASHPRSKLLQ 294


>ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arabidopsis lyrata subsp.
           lyrata] gi|297309263|gb|EFH39687.1| hypothetical protein
           ARALYDRAFT_356389 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 50.8 bits (120), Expect(2) = 8e-09
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -1

Query: 428 AHSGSAAPPGVRATREASYYSERLE 354
           +HSGSAAPPGV+ATREASYYSERLE
Sbjct: 232 SHSGSAAPPGVQATREASYYSERLE 256



 Score = 34.7 bits (78), Expect(2) = 8e-09
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 474 NHAFMRAPGNIGRLLS 427
           NHAF RAPGNIGRLLS
Sbjct: 217 NHAFTRAPGNIGRLLS 232


>ref|YP_008080926.1| cytochrome oxidase subunit 2 (mitochondrion) [Butomus umbellatus]
           gi|426261827|gb|AFY16543.1| cytochrome oxidase subunit 2
           (mitochondrion) [Butomus umbellatus]
          Length = 222

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = -3

Query: 477 TNHAFMRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQ 367
           TNHAF RAPG IGRLLSPLWLS TTRG   P+SKLLQ
Sbjct: 173 TNHAFTRAPGYIGRLLSPLWLSHTTRGVIPPKSKLLQ 209


>ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion) [Anomodon rugelii]
           gi|336089487|gb|AEH99677.1| hypothetical protein
           AnruMp28 [Anomodon rugelii]
          Length = 101

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
 Frame = -1

Query: 299 PGGAEETVRITNLKRGARA----------AGERVVSGQ*RPS*WHSSL----RLALEEPR 162
           PG AE+ VRIT+LKRGAR           +GERVV+   +P   +  L      ALE+P+
Sbjct: 20  PGEAEDMVRITSLKRGARPKLDRPSQAGYSGERVVN---KPIVLNPQLMALASAALEKPQ 76

Query: 161 GTPYRAS 141
           GTPYR S
Sbjct: 77  GTPYRVS 83



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 145 QASLRDETPAQGPQFSLGGRT 83
           + S RD+TPAQGP+FSLGG+T
Sbjct: 81  RVSPRDQTPAQGPKFSLGGKT 101


>gb|EYU25279.1| hypothetical protein MIMGU_mgv1a023641mg, partial [Mimulus
           guttatus]
          Length = 234

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 477 TNHAFMRAPGNIGRLLSPLWLSRTT 403
           TNHAFMRAPGNIGRLLSPLWLSRTT
Sbjct: 209 TNHAFMRAPGNIGRLLSPLWLSRTT 233