BLASTX nr result
ID: Cocculus22_contig00012812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00012812
(355 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 171 8e-41
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 162 5e-38
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 162 5e-38
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt... 161 8e-38
ref|XP_007030612.1| Pseudouridine synthase family protein isofor... 159 3e-37
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt... 159 4e-37
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt... 159 4e-37
ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt... 159 5e-37
ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synt... 159 5e-37
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt... 157 1e-36
dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare] 156 3e-36
ref|XP_006654622.1| PREDICTED: putative pseudouridine synthase C... 155 4e-36
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 155 4e-36
emb|CBI34194.3| unnamed protein product [Vitis vinifera] 155 4e-36
ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phas... 155 6e-36
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C... 155 6e-36
ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo... 155 6e-36
ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt... 153 2e-35
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 153 2e-35
gb|AFW82439.1| hypothetical protein ZEAMMB73_597944 [Zea mays] 152 5e-35
>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
vinifera]
Length = 694
Score = 171 bits (434), Expect = 8e-41
Identities = 82/102 (80%), Positives = 95/102 (93%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SE+TIKA+ ++LGR GFINYFGLQRFG+ SVPTHLIGAALLRGEW+TAV+LILDP
Sbjct: 284 GVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDP 343
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD++R+ REYYKE+ DIEGT+RQ PR+LVAERAILQCL
Sbjct: 344 REGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAILQCL 385
>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Citrus sinensis]
Length = 739
Score = 162 bits (410), Expect = 5e-38
Identities = 76/102 (74%), Positives = 89/102 (87%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVV SED IKA+ NSLGR GFINYFGLQRFG+ SVPTHL+GA LLRGEW++AV +ILDP
Sbjct: 332 GVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDP 391
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGER+ + + REYYKE DI+GT+R+LPR+LVAERAILQCL
Sbjct: 392 REGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCL 433
>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
gi|550338143|gb|ERP60572.1| hypothetical protein
POPTR_0005s05300g [Populus trichocarpa]
Length = 752
Score = 162 bits (410), Expect = 5e-38
Identities = 81/107 (75%), Positives = 93/107 (86%), Gaps = 5/107 (4%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV+A SEDTIKAA +SLGR GFINYFGLQRFGT SVPTHLIGAALLRGEW+TAV++ILDP
Sbjct: 343 GVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDP 402
Query: 230 REGE-----RDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REG+ +R+ REYYKE+ DIEGT+RQLPR+LVAERA+LQCL
Sbjct: 403 REGDILLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCL 449
>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
tuberosum]
Length = 685
Score = 161 bits (408), Expect = 8e-38
Identities = 77/102 (75%), Positives = 93/102 (91%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV A+SED IKA+ +LG+ GFINYFGLQRFG++SVPTHLIGAALLRGEW+ AV+LILDP
Sbjct: 284 GVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDP 343
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGE++++ VREYYKE+ DI+GT+RQLPRYLVAE+AILQCL
Sbjct: 344 REGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEKAILQCL 385
>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
gi|508719217|gb|EOY11114.1| Pseudouridine synthase
family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 159 bits (403), Expect = 3e-37
Identities = 77/102 (75%), Positives = 87/102 (85%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
G+VA SE+TIKA+ SLGR GFINYFGLQRFG+ S+PTH IGA LLRGEWQ A + ILDP
Sbjct: 325 GIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDP 384
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD V + REYYKE DIEGT+RQLPR+LVAERA+LQCL
Sbjct: 385 REGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCL 426
>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 693
Score = 159 bits (402), Expect = 4e-37
Identities = 71/102 (69%), Positives = 93/102 (91%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SED I+A+ N+LG++GF+NYFGLQRFG+ S+PTHLIGA+LLRGEW++ V+++L+P
Sbjct: 283 GVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEP 342
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD + E R+YYKE+ DI+GT+R+LPRYLVAERA+LQCL
Sbjct: 343 REGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVLQCL 384
>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 701
Score = 159 bits (402), Expect = 4e-37
Identities = 71/102 (69%), Positives = 93/102 (91%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SED I+A+ N+LG++GF+NYFGLQRFG+ S+PTHLIGA+LLRGEW++ V+++L+P
Sbjct: 283 GVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEP 342
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD + E R+YYKE+ DI+GT+R+LPRYLVAERA+LQCL
Sbjct: 343 REGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVLQCL 384
>ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Setaria italica]
Length = 685
Score = 159 bits (401), Expect = 5e-37
Identities = 73/102 (71%), Positives = 89/102 (87%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV+A+SED IKAA + LG+ GFINY+GLQRFG+ S+PTHL+GAALLRGEW+ AVNLILDP
Sbjct: 300 GVIAESEDVIKAAADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDP 359
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD + EVR++YKE+ DI+ +R PR+LVAERAILQCL
Sbjct: 360 REGERDDINEVRKHYKEHGDIDKALRNFPRHLVAERAILQCL 401
>ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Setaria italica]
Length = 686
Score = 159 bits (401), Expect = 5e-37
Identities = 73/102 (71%), Positives = 89/102 (87%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV+A+SED IKAA + LG+ GFINY+GLQRFG+ S+PTHL+GAALLRGEW+ AVNLILDP
Sbjct: 300 GVIAESEDVIKAAADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDP 359
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD + EVR++YKE+ DI+ +R PR+LVAERAILQCL
Sbjct: 360 REGERDDINEVRKHYKEHGDIDKALRNFPRHLVAERAILQCL 401
>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
lycopersicum]
Length = 685
Score = 157 bits (398), Expect = 1e-36
Identities = 76/102 (74%), Positives = 92/102 (90%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV A+SED IKA+ +LG+ GFINYFGLQRFG++SVPTHLIGAALLRGEW+ AV+LILDP
Sbjct: 284 GVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDP 343
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGE++++ VREYYKE+ DI+GT+RQLPRYLVAE+AILQ L
Sbjct: 344 REGEKNTISTVREYYKESGDIDGTLRQLPRYLVAEKAILQSL 385
>dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 700
Score = 156 bits (394), Expect = 3e-36
Identities = 73/102 (71%), Positives = 91/102 (89%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA+SED IKAA + LG+ GFINY+GLQRFG+ SVPTHLIGAALLRGEW++AV+L+LDP
Sbjct: 308 GVVAESEDMIKAAVDGLGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKSAVHLVLDP 367
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD ++EVRE+YK++ DI+ +R PR+LVAE+AILQCL
Sbjct: 368 REGERDDIKEVREHYKQHGDIDMALRNFPRHLVAEKAILQCL 409
>ref|XP_006654622.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Oryza
brachyantha]
Length = 375
Score = 155 bits (393), Expect = 4e-36
Identities = 74/102 (72%), Positives = 90/102 (88%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA+SED IKAA LG+ GFINY+GLQRFG++SVPT L+GAALLRGEW++AVNLILDP
Sbjct: 121 GVVAESEDVIKAAVEGLGKNGFINYYGLQRFGSSSVPTQLVGAALLRGEWKSAVNLILDP 180
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD +REVRE+YKE+ +I+ +R PR+LVAE+AILQCL
Sbjct: 181 REGERDDIREVREHYKEHGNIDMALRNFPRHLVAEKAILQCL 222
>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
gi|52354299|gb|AAU44470.1| hypothetical protein
AT3G04820 [Arabidopsis thaliana]
gi|61742699|gb|AAX55170.1| hypothetical protein
At3g04820 [Arabidopsis thaliana]
gi|332640619|gb|AEE74140.1| pseudouridine synthase
[Arabidopsis thaliana]
Length = 715
Score = 155 bits (393), Expect = 4e-36
Identities = 75/102 (73%), Positives = 87/102 (85%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SE+TIK + SLG+ GFINYFGLQRFG+ SVPTH +GAALL+GEW+ AV++ILDP
Sbjct: 322 GVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAVDMILDP 381
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
RE ER V + REYYKE DI+GT+RQLPRYLVAERAILQCL
Sbjct: 382 RETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCL 423
>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
Length = 693
Score = 155 bits (393), Expect = 4e-36
Identities = 78/102 (76%), Positives = 91/102 (89%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SE+TIKA+ ++LGR GFINYFGLQRFG+ SVPTHLIGAALLRGEW+TAV+LILDP
Sbjct: 284 GVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDP 343
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REG+ + + REYYKE+ DIEGT+RQ PR+LVAERAILQCL
Sbjct: 344 REGD-ILLLKAREYYKESDDIEGTLRQFPRHLVAERAILQCL 384
>ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
gi|561020376|gb|ESW19147.1| hypothetical protein
PHAVU_006G100200g [Phaseolus vulgaris]
Length = 691
Score = 155 bits (392), Expect = 6e-36
Identities = 72/102 (70%), Positives = 90/102 (88%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
G+V+ SED IKA+ ++LGR GFINYFGLQRFG+ S+PTHLIGAALLRGEW+ AV++ILDP
Sbjct: 288 GIVSDSEDIIKASADALGRLGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDP 347
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGER ++ + R+YYKEN D+ GT++QLPRYLVAERA+LQ L
Sbjct: 348 REGERSAIAKARKYYKENNDVVGTLKQLPRYLVAERAVLQSL 389
>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
sativus]
Length = 719
Score = 155 bits (392), Expect = 6e-36
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA SED IKA+ +LGR GFINYFGLQRFG+ SVPTHL+GA+LLRGEW+ AVN+ILDP
Sbjct: 323 GVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDP 382
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REG+ + R+YYKE+ DI+GT++QLPRYLVAERAILQCL
Sbjct: 383 REGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCL 424
>ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium
distachyon]
Length = 693
Score = 155 bits (392), Expect = 6e-36
Identities = 73/102 (71%), Positives = 91/102 (89%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GVVA+SE IKAA +SLG+ GFINY+GLQRFG++SVPTHL+G+ALLRGEW+TAV LILDP
Sbjct: 301 GVVAESEGVIKAAVDSLGKNGFINYYGLQRFGSSSVPTHLVGSALLRGEWKTAVKLILDP 360
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD +++VRE+YKE+ DI+ +R PR+LVAE+AILQCL
Sbjct: 361 REGERDDIKKVREHYKEHGDIDMALRNFPRHLVAEKAILQCL 402
>ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Glycine max]
Length = 676
Score = 153 bits (387), Expect = 2e-35
Identities = 70/102 (68%), Positives = 90/102 (88%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
G+VA SED IKA+ ++LGR GFINYFGLQRFG+ S+PTHLIGAALLRGEW+ AV++ILDP
Sbjct: 274 GIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDP 333
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
R+GE+ ++ + R+YYKE+ D+ GT++QLPRYLVAERA+LQ L
Sbjct: 334 RDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVLQTL 375
>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Glycine max]
Length = 687
Score = 153 bits (387), Expect = 2e-35
Identities = 70/102 (68%), Positives = 90/102 (88%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
G+VA SED IKA+ ++LGR GFINYFGLQRFG+ S+PTHLIGAALLRGEW+ AV++ILDP
Sbjct: 285 GIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDP 344
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
R+GE+ ++ + R+YYKE+ D+ GT++QLPRYLVAERA+LQ L
Sbjct: 345 RDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVLQTL 386
>gb|AFW82439.1| hypothetical protein ZEAMMB73_597944 [Zea mays]
Length = 418
Score = 152 bits (384), Expect = 5e-35
Identities = 72/102 (70%), Positives = 86/102 (84%)
Frame = +2
Query: 50 GVVAKSEDTIKAAGNSLGRKGFINYFGLQRFGTASVPTHLIGAALLRGEWQTAVNLILDP 229
GV A+SED IK A + LG+ GFINY+GLQRFG+ S+PTHL+GAALLRGEW+ AVNLILDP
Sbjct: 269 GVTAESEDMIKIAVDGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDP 328
Query: 230 REGERDSVREVREYYKENCDIEGTIRQLPRYLVAERAILQCL 355
REGERD + EVR+ YKE+ DI+ +R PR+LVAERAILQCL
Sbjct: 329 REGERDDINEVRKRYKEHGDIDMALRNFPRHLVAERAILQCL 370