BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00012706
         (272 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2...    58   1e-06
ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citr...    58   1e-06
ref|XP_007036830.1| Transducin/WD40 repeat-like superfamily prot...    58   1e-06
ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    57   3e-06
ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...    57   3e-06
emb|CBI22758.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...    57   3e-06
gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]      56   5e-06

>ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2-like [Citrus sinensis]
          Length = 366

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNN-SSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARCEWDFNL  T+ SS++ ++A+SD++G  EF PS  + AT GIARK
Sbjct: 18  RARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARK 65


>ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citrus clementina]
           gi|557523775|gb|ESR35142.1| hypothetical protein
           CICLE_v10005222mg [Citrus clementina]
          Length = 366

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNN-SSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARCEWDFNL  T+ SS++ ++A+SD++G  EF PS  + AT GIARK
Sbjct: 18  RARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARK 65


>ref|XP_007036830.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508774075|gb|EOY21331.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 414

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARCEWDF+L  T++S++  +A+SDTLG  EF PS  ++AT GIARK
Sbjct: 64  RARCEWDFSL-STVVSTSAEAAVSDTLGVIEFDPSNTVVATGGIARK 109


>ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           COP1-like [Cucumis sativus]
          Length = 384

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +1

Query: 136 RCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           RCEWDF L  +++SS  + A SDTLG  EF PS  L+ATAGIARK
Sbjct: 30  RCEWDFTL-ASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIARK 73


>ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
          Length = 383

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +1

Query: 136 RCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           RCEWDF L  +++SS  + A SDTLG  EF PS  L+ATAGIARK
Sbjct: 30  RCEWDFTL-ASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIARK 73


>emb|CBI22758.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 38/47 (80%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARC+W+FNL  T+++S+++ A +DT+G  EF PS +L+AT GIARK
Sbjct: 33  RARCDWEFNL-STVVTSSSTGASTDTIGVIEFDPSDNLVATGGIARK 78


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 38/47 (80%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARC+W+FNL  T+++S+++ A +DT+G  EF PS +L+AT GIARK
Sbjct: 33  RARCDWEFNL-STVVTSSSTGASTDTIGVIEFDPSDNLVATGGIARK 78


>gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
          Length = 396

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +1

Query: 130 KARCEWDFNLLCTILSSNNSSAISDTLGATEFHPSGHLLATAGIARK 270
           +ARCEWDF+L  T++SS  ++A SD LG  EF PSG LLAT GIARK
Sbjct: 44  RARCEWDFHLR-TVVSS--ATAASDALGVIEFGPSGELLATGGIARK 87