BLASTX nr result
ID: Cocculus22_contig00012644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00012644
(285 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18084.3| unnamed protein product [Vitis vinifera] 114 2e-23
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 114 2e-23
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr... 102 7e-20
ref|XP_002309169.1| pentatricopeptide repeat-containing family p... 96 4e-18
ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily p... 96 5e-18
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat... 95 9e-18
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat... 95 9e-18
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 95 1e-17
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,... 94 1e-17
gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea] 94 3e-17
ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat... 91 1e-16
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] 91 2e-16
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat... 89 8e-16
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat... 86 4e-15
ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phas... 84 3e-14
ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat... 82 1e-13
ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prun... 77 2e-12
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [A... 71 1e-10
>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 114 bits (284), Expect = 2e-23
Identities = 56/94 (59%), Positives = 64/94 (68%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
KKL LQG N+F LK LLR GL DNYL+NMILR SF+ + + R LF QI PN
Sbjct: 17 KKLILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPN 76
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFLWNTMIRG VSND +AI+FY LMR +G P
Sbjct: 77 IFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLP 110
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 114 bits (284), Expect = 2e-23
Identities = 56/94 (59%), Positives = 64/94 (68%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
KKL LQG N+F LK LLR GL DNYL+NMILR SF+ + + R LF QI PN
Sbjct: 17 KKLILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPN 76
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFLWNTMIRG VSND +AI+FY LMR +G P
Sbjct: 77 IFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLP 110
>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
gi|568855070|ref|XP_006481133.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like [Citrus sinensis]
gi|557531571|gb|ESR42754.1| hypothetical protein
CICLE_v10011209mg [Citrus clementina]
Length = 688
Score = 102 bits (253), Expect = 7e-20
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K LQG N+ QLK LLR+GL QD+YL+N++LRS F G + L+F Q PN
Sbjct: 19 KNRLLQGFNSIKQLKYVHAILLRVGLDQDSYLLNLLLRSCFHFGQTNYTHLIFSQTKEPN 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFL+NTMIRGFVSND AI+FY+ MR +G P
Sbjct: 79 IFLYNTMIRGFVSNDCFQHAIEFYNSMRNEGFLP 112
>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855145|gb|EEE92692.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 619
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +2
Query: 17 QGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPNIFLWN 196
QG N+ LK LLRLGL +D+YL+N +LR SF GN ++ +F Q PNIFL+N
Sbjct: 18 QGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFN 77
Query: 197 TMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
TMI G V NDS E+I+ YH MRK+GL P
Sbjct: 78 TMIHGLVLNDSFQESIEIYHSMRKEGLSP 106
>ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590566803|ref|XP_007010337.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508727249|gb|EOY19146.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508727250|gb|EOY19147.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 688
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/93 (50%), Positives = 58/93 (62%)
Frame = +2
Query: 5 KLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPNI 184
K L G + LKQ L RLGLHQ NYL+N+IL+++F G +A L+F+Q PNI
Sbjct: 20 KRILGGFTSVRHLKQVHAALFRLGLHQHNYLLNIILKATFHFGQTNYACLIFNQTKQPNI 79
Query: 185 FLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
+LWNTMI+G VS D EA QFY MR G P
Sbjct: 80 YLWNTMIQGLVSGDCFLEAAQFYASMRSQGFLP 112
>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/94 (50%), Positives = 58/94 (61%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K G N F QLK RLLRL L QDNYL+N+IL + + G+ +++L+F Q+ PN
Sbjct: 19 KNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPN 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFLWNTMIRG VS D +AI Y MR G P
Sbjct: 79 IFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLP 112
>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/94 (50%), Positives = 58/94 (61%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K G N F QLK RLLRL L QDNYL+N+IL + + G+ +++L+F Q+ PN
Sbjct: 19 KNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPN 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFLWNTMIRG VS D +AI Y MR G P
Sbjct: 79 IFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLP 112
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K +QG + LK LLRLGL +D YL+N +LR SF GN ++ + DQ PN
Sbjct: 13 KNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPN 72
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFL+NTMIRG V ND E+I+ YH MRK+GL P
Sbjct: 73 IFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSP 106
>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/94 (48%), Positives = 62/94 (65%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K LQ N+ QLK LLRLG Q +YL +MI+RSSF+ + + RL+F+QI P+
Sbjct: 19 KNRLLQSFNSLKQLKHVHAALLRLGFDQGSYLWSMIIRSSFDFNDTTYTRLIFNQIKEPD 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
+ L+NTMIRG VS+D E+I+FY+ MRK G P
Sbjct: 79 VVLYNTMIRGLVSSDCFTESIEFYYSMRKKGFLP 112
>gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]
Length = 685
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = +2
Query: 14 LQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPNIFLW 193
++G FT LKQ RLLR LHQD+YL+NM+L+S+F + +F Q PN +L+
Sbjct: 19 VRGFRAFTHLKQVHARLLRFELHQDHYLLNMVLKSAFNFCRPDYTIAVFGQTLRPNFYLY 78
Query: 194 NTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
NTMIRG VSND +AI+++++MRK G P
Sbjct: 79 NTMIRGLVSNDCFSQAIEYFYMMRKQGFLP 108
>ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Glycine max]
gi|571494895|ref|XP_006592973.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Glycine max]
Length = 681
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
KK F G + Q KQ LLRLGLHQD YLIN++LRSS +A ++F Q PN
Sbjct: 11 KKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPN 70
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
IFL+NT+IRG VSND+ +A+ Y MR+ G P
Sbjct: 71 IFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAP 104
>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
Length = 688
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/94 (46%), Positives = 58/94 (61%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K L LQG T LK LLRLGL QDN+L+N+ R +F+ GN ++ L+F PN
Sbjct: 19 KNLLLQGFITSNHLKHVHASLLRLGLDQDNFLLNLFFRYAFDFGNTSYPLLVFRHTKQPN 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
I++WNT+IRG VS+ +AI FY MR+ G P
Sbjct: 79 IYVWNTVIRGLVSSHCFDDAIDFYFSMRRQGFLP 112
>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Fragaria vesca subsp. vesca]
Length = 688
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/94 (45%), Positives = 64/94 (68%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
K ++G +F QLK RLLRLGL QDN+L+ ++LRS+F+ +A L+F + PN
Sbjct: 19 KHRLIEGFTSFKQLKHAHARLLRLGLDQDNHLLTLLLRSAFDFRQTNYALLVFHRTAEPN 78
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
++L+NT+IRG VS++ +AI+ Y MR +GLFP
Sbjct: 79 VYLFNTIIRGLVSHECWEDAIRLYGSMRTEGLFP 112
>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum lycopersicum]
Length = 688
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFES-GNVAHARLLFDQITGP 178
K G +F QLK RL+R G Q+NYL+N++L+ + + N +A+L+F+Q P
Sbjct: 17 KTALFNGFQSFNQLKHIHARLIRAGFDQNNYLLNLLLKFTLNNFNNPNYAKLVFNQAQEP 76
Query: 179 NIFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
NIFL+NTMIRG VSN+ ++I+F+H MR +G P
Sbjct: 77 NIFLYNTMIRGLVSNNCFHQSIEFFHGMRNEGFLP 111
>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum tuberosum]
Length = 687
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFES-GNVAHARLLFDQITGP 178
K G +F QLK RL+R G Q+NYL+N++L+ + + N +A+L+F+Q P
Sbjct: 17 KAALFHGFQSFNQLKHIHARLIRTGFDQNNYLLNLLLKFTLNNFNNPNYAKLVFNQTQEP 76
Query: 179 NIFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
NIFL+NTMIRG VSN+ ++I ++H MR +G P
Sbjct: 77 NIFLYNTMIRGLVSNNCFHQSIAYFHGMRNEGFLP 111
>ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phaseolus vulgaris]
gi|561006846|gb|ESW05840.1| hypothetical protein
PHAVU_011G213900g [Phaseolus vulgaris]
Length = 690
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/93 (46%), Positives = 56/93 (60%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPN 181
KK G ++KQ RLLRLGLH D +LIN +LRSS +A ++F Q PN
Sbjct: 20 KKCLASGFRWLQEVKQCHCRLLRLGLHHDTFLINTLLRSSLNLRATQYATVVFAQTPNPN 79
Query: 182 IFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLF 280
IFL+NT+IRG VSN++ EA+ Y MR+ F
Sbjct: 80 IFLYNTLIRGLVSNEAFHEAVSLYASMRQRSAF 112
>ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Cicer arietinum]
gi|502082246|ref|XP_004487108.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Cicer arietinum]
Length = 668
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 KKLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQI-TGP 178
K ++G + +K RLLRL L QDNYL N+ILRSS N ++ L+F + T P
Sbjct: 9 KWCLVEGLKSLKDVKLAHCRLLRLNLQQDNYLPNIILRSSLTLSNTQYSNLVFHKTPTYP 68
Query: 179 NIFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
N FL+NTMIRG VSND +A+Q Y M K L P
Sbjct: 69 NTFLYNTMIRGMVSNDRFHDAVQLYSSMHKASLIP 103
>ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prunus persica]
gi|462402697|gb|EMJ08254.1| hypothetical protein
PRUPE_ppb002198mg [Prunus persica]
Length = 636
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2
Query: 104 MILRSSFESGNVAHARLLFDQITGPNIFLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
M+LRS F+ G+ +++RL+FDQ T PNIFLWNTMIRG VS+D +AI+F+ MR +G+ P
Sbjct: 1 MVLRSGFDFGHASYSRLVFDQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILP 60
>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Glycine max]
gi|571525647|ref|XP_006598987.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Glycine max]
Length = 483
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/92 (36%), Positives = 51/92 (55%)
Frame = +2
Query: 8 LFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPNIF 187
+ LQ C+ F QLKQ G+++R GL D L+ +++ S G + +A L+FDQ+ P++F
Sbjct: 30 VLLQKCSNFKQLKQVHGKIIRFGLTYDQLLMRKLIQLSSSYGKMKYATLVFDQLNAPDVF 89
Query: 188 LWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
WN MIR F S A+ + M G P
Sbjct: 90 TWNVMIRAFTIGGSPKMALLLFKAMLCQGFAP 121
>ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [Amborella trichopoda]
gi|548846750|gb|ERN05992.1| hypothetical protein
AMTR_s00143p00072540 [Amborella trichopoda]
Length = 227
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/93 (43%), Positives = 51/93 (54%)
Frame = +2
Query: 5 KLFLQGCNTFTQLKQFQGRLLRLGLHQDNYLINMILRSSFESGNVAHARLLFDQITGPNI 184
KL L C T + L Q +LR GL ++ L +LRS SG V ARLLFDQ+ PN+
Sbjct: 45 KLLLGSCKTASHLVQIHASILRNGLDRNPLLQFKLLRSYSSSGLVNQARLLFDQVHEPNV 104
Query: 185 FLWNTMIRGFVSNDSLCEAIQFYHLMRKDGLFP 283
F W +IRG N EAI Y+ M+ G+ P
Sbjct: 105 FFWTAIIRGCALNGLYKEAILLYYQMQDGGVEP 137