BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00012387
         (741 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]...    62   3e-07
gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    43   1e-06

>gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224350|prf||1102209D ORF 4
          Length = 64

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 7/61 (11%)
 Frame = -2

Query: 305 STKSFLDLKKRKIEKKRNNFADNYRFFVWSEESSKYSGFGLTI-------RNRKERISSL 147
           S KSFLDLKK    KKRNNFADNY FF+ SEESS+Y  FG+T+        N++E+I SL
Sbjct: 9   SKKSFLDLKK----KKRNNFADNYIFFILSEESSEY--FGITLVSISFWNMNKEEKIGSL 62

Query: 146 H 144
           H
Sbjct: 63  H 63


>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = +2

Query: 56  ISSRTKHESFDSFGSHAQLLNGGIPISFF 142
           I SRTKHESFDSFGSHAQLL     I F+
Sbjct: 15  IPSRTKHESFDSFGSHAQLLKVNSHIFFY 43



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
 Frame = +1

Query: 124 HSHIFF*-CNELILSFLFLI-----VNPKPEYLEDSSDQTKN 231
           +SHIFF  CNE I S LF+       N  P+Y EDSSD+ KN
Sbjct: 37  NSHIFFYECNEPIFSSLFIFQKDIETNVIPKYSEDSSDKIKN 78