BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00012189
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007026519.1| Pentatricopeptide repeat superfamily protein...   123   3e-26
ref|XP_004298046.1| PREDICTED: pentatricopeptide repeat-containi...   118   1e-24
ref|XP_007139163.1| hypothetical protein PHAVU_008G006600g [Phas...   117   1e-24
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
gb|ACU18704.1| unknown [Glycine max]                                  117   1e-24
gb|EXB68678.1| hypothetical protein L484_024693 [Morus notabilis]     115   5e-24
ref|XP_007221863.1| hypothetical protein PRUPE_ppa019240mg, part...   112   4e-23
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   111   9e-23
ref|XP_006372910.1| hypothetical protein POPTR_0017s06150g [Popu...   110   2e-22
ref|XP_004492944.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_006858658.1| hypothetical protein AMTR_s00066p00064040 [A...   100   4e-19

>ref|XP_007026519.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508715124|gb|EOY07021.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 610

 Score =  123 bits (308), Expect = 3e-26
 Identities = 64/99 (64%), Positives = 74/99 (74%)
 Frame = +1

Query: 1   AGLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVF 180
           AGLVPTRSA+N+LIG+LC  S  EG I KV+  N  RPF+ILVPNV SK  AI+PA  VF
Sbjct: 264 AGLVPTRSAVNVLIGQLCLLSAKEGAIEKVRVKNVSRPFTILVPNVSSKKGAIEPAVSVF 323

Query: 181 WAMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
              H  GLLPSAFVI QL+ ELCRL K++EA  +LKVVE
Sbjct: 324 RKAHDSGLLPSAFVIVQLLSELCRLEKLEEAYKILKVVE 362


>ref|XP_004298046.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Fragaria vesca subsp. vesca]
          Length = 552

 Score =  118 bits (295), Expect = 1e-24
 Identities = 60/99 (60%), Positives = 72/99 (72%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           GLVPTRSA+N+LIGELC  S  E  + KV+  N RRPF ILVPNV  K  AIQPA  VFW
Sbjct: 243 GLVPTRSAVNVLIGELCLLSAKEAAVAKVRVKNVRRPFKILVPNVHEKSGAIQPAVGVFW 302

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVEG 300
            ++  GLLPS FVI +L+ EL +L K++EAV VL+ VEG
Sbjct: 303 EVYKLGLLPSTFVIIRLLLELSKLGKMEEAVGVLRAVEG 341


>ref|XP_007139163.1| hypothetical protein PHAVU_008G006600g [Phaseolus vulgaris]
           gi|561012296|gb|ESW11157.1| hypothetical protein
           PHAVU_008G006600g [Phaseolus vulgaris]
          Length = 557

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G++PTRSAIN+LIGELC  S  EG + KV+  N RRP++ILVPN+G     +QPA QVFW
Sbjct: 250 GVLPTRSAINMLIGELCLMSAKEGSVEKVRVRNTRRPYTILVPNMGGNSDVMQPAVQVFW 309

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           A+   GLLPSAFV+ +L+ ELCRL   +EAV VL++VE
Sbjct: 310 AVCKAGLLPSAFVVVKLMCELCRLGNTEEAVRVLRIVE 347


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/100 (58%), Positives = 73/100 (73%)
 Frame = +1

Query: 1   AGLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVF 180
           AGLVPTR+A+NILIG LC  S  EG + KV+  +  RPF++LVPNV  K  AI+PA  +F
Sbjct: 269 AGLVPTRTAVNILIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKSGAIEPAVGIF 328

Query: 181 WAMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVEG 300
           WA +   L+PS+FV  QLI ELCRL ++ EA+ VLKVVEG
Sbjct: 329 WAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVLKVVEG 368


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 367

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/98 (60%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G++PTRSA+N+LIGELC  S  EG + KV+  N RRP++ILVPN+G    AIQPA QVFW
Sbjct: 60  GVLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFW 119

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           A+ + GLLPSAFV+ +L+ ELCRL    EAV VL++VE
Sbjct: 120 AVCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVE 157


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/98 (60%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G++PTRSA+N+LIGELC  S  EG + KV+  N RRP++ILVPN+G    AIQPA QVFW
Sbjct: 60  GVLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFW 119

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           A+ + GLLPSAFV+ +L+ ELCRL    EAV VL++VE
Sbjct: 120 AVCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVE 157


>gb|EXB68678.1| hypothetical protein L484_024693 [Morus notabilis]
          Length = 579

 Score =  115 bits (289), Expect = 5e-24
 Identities = 62/102 (60%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   AGLVPTRSAINILIGELCGASVNEGCINKV--KFTNFRRPFSILVPNVG-SKGIAIQPAA 171
           AGLVPTR+A+N+L+G+LC  S  EG + KV  K +  RRP +ILVPNVG  K  AI+PA 
Sbjct: 270 AGLVPTRTAVNVLVGKLCEFSAKEGGVEKVRVKESTNRRPSTILVPNVGVKKSGAIEPAI 329

Query: 172 QVFWAMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           +VFW  H  GLLPS+FVI QL+ ELCR+ K+D+AV+VLKVVE
Sbjct: 330 RVFWEAHYIGLLPSSFVIVQLLLELCRVGKMDDAVEVLKVVE 371


>ref|XP_007221863.1| hypothetical protein PRUPE_ppa019240mg, partial [Prunus persica]
           gi|462418799|gb|EMJ23062.1| hypothetical protein
           PRUPE_ppa019240mg, partial [Prunus persica]
          Length = 305

 Score =  112 bits (281), Expect = 4e-23
 Identities = 59/100 (59%), Positives = 72/100 (72%)
 Frame = +1

Query: 1   AGLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVF 180
           +GLVPTRSA+N+LIG+LC  S  EG + KV+  +  R F+ILVP VG    AIQPA  VF
Sbjct: 24  SGLVPTRSAVNVLIGDLCLFSAKEGAVEKVRVKDPYRTFTILVPKVGGNRDAIQPAVGVF 83

Query: 181 WAMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVEG 300
           W ++  GLLPSAFVI +LI  LC+L K +EAV VLK VEG
Sbjct: 84  WEVYKLGLLPSAFVIIRLISGLCQLGKAEEAVKVLKAVEG 123


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/98 (58%), Positives = 72/98 (73%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G+ PTRSA+N+LIG+LC  S  EG + KVK T  RRP+SILVPN+G    AIQPA +VF 
Sbjct: 271 GVHPTRSAMNVLIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQPAVEVFS 330

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           A+   GLLPS FV+ +L+ ELCRL   +EAV VL++VE
Sbjct: 331 AVVNSGLLPSTFVVFRLMSELCRLGNTEEAVKVLRIVE 368


>ref|XP_006372910.1| hypothetical protein POPTR_0017s06150g [Populus trichocarpa]
           gi|550319558|gb|ERP50707.1| hypothetical protein
           POPTR_0017s06150g [Populus trichocarpa]
          Length = 578

 Score =  110 bits (276), Expect = 2e-22
 Identities = 59/99 (59%), Positives = 73/99 (73%)
 Frame = +1

Query: 1   AGLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVF 180
           A LVPTRSA+N L+ ELC  S  EG +N+V+  + R+P++ILVPNVG K  AI+PA  VF
Sbjct: 268 ARLVPTRSAVNFLMRELCLLSAKEGAVNEVRVHSSRKPYTILVPNVGPKSGAIRPAVGVF 327

Query: 181 WAMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
            A+   GLLPS FVI QLI ELCRL K+ EA ++LKVVE
Sbjct: 328 LAVCDLGLLPSTFVIIQLITELCRLGKMTEAFEILKVVE 366


>ref|XP_004492944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cicer arietinum]
          Length = 571

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G+ PTRSA+NILIGELC  S  EG + KV+  N RRP+SILVPN+G    AIQPA +VF+
Sbjct: 264 GVHPTRSAVNILIGELCLMSSKEGFVEKVRVMNTRRPYSILVPNMGGNRGAIQPAIEVFF 323

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
           A+   GLLP  FV+ +L+ ELCRL    EA+ VL++VE
Sbjct: 324 AVVNSGLLPGTFVVIKLMSELCRLGDTGEALKVLRIVE 361


>ref|XP_006858658.1| hypothetical protein AMTR_s00066p00064040 [Amborella trichopoda]
           gi|548862769|gb|ERN20125.1| hypothetical protein
           AMTR_s00066p00064040 [Amborella trichopoda]
          Length = 433

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 48/98 (48%), Positives = 69/98 (70%)
 Frame = +1

Query: 4   GLVPTRSAINILIGELCGASVNEGCINKVKFTNFRRPFSILVPNVGSKGIAIQPAAQVFW 183
           G+ PTRSAIN LIG LC  +       K++  + RRPFSI+VPN+  +   I+PA +VF 
Sbjct: 137 GMTPTRSAINNLIGGLCDENSERLRCEKLRINDHRRPFSIMVPNIAKRSY-IEPAIEVFK 195

Query: 184 AMHAWGLLPSAFVINQLIFELCRLRKIDEAVDVLKVVE 297
            +   GL PSAFV+N L+FELCR+R++DEA+D++++ E
Sbjct: 196 KVCELGLFPSAFVLNMLVFELCRVRELDEALDIVRIAE 233