BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00012165
         (665 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315059.2| hypothetical protein POPTR_0010s17750g [Popu...    84   4e-14
ref|XP_007045322.1| Pre-mRNA-processing protein 40C [Theobroma c...    79   1e-12
ref|XP_002311295.1| FF domain-containing family protein [Populus...    76   1e-11
ref|XP_007221939.1| hypothetical protein PRUPE_ppa001490mg [Prun...    75   2e-11
ref|XP_004159026.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    74   3e-11
ref|XP_004141751.1| PREDICTED: pre-mRNA-processing protein 40C-l...    74   3e-11
ref|XP_002272014.2| PREDICTED: transcription elongation regulato...    74   3e-11
ref|XP_006592054.1| PREDICTED: pre-mRNA-processing protein 40C-l...    73   9e-11
ref|XP_006592053.1| PREDICTED: pre-mRNA-processing protein 40C-l...    73   9e-11
ref|XP_003540642.1| PREDICTED: pre-mRNA-processing protein 40C-l...    73   9e-11
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...    72   1e-10
ref|XP_004297757.1| PREDICTED: pre-mRNA-processing protein 40C-l...    72   2e-10
gb|AFK45747.1| unknown [Lotus japonicus]                               72   2e-10
ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-l...    70   5e-10
ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-l...    70   5e-10
ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citr...    69   1e-09
gb|EXC33082.1| Transcription elongation regulator 1 [Morus notab...    69   1e-09
ref|XP_003538973.2| PREDICTED: pre-mRNA-processing protein 40C-l...    69   1e-09
ref|XP_006590824.1| PREDICTED: pre-mRNA-processing protein 40C-l...    69   1e-09
ref|XP_004505734.1| PREDICTED: pre-mRNA-processing protein 40C-l...    69   1e-09

>ref|XP_002315059.2| hypothetical protein POPTR_0010s17750g [Populus trichocarpa]
            gi|550330031|gb|EEF01230.2| hypothetical protein
            POPTR_0010s17750g [Populus trichocarpa]
          Length = 963

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            +KPDPRY+K+PRKERE+LWRRYAEEMLRKQ    DPKEDK +T++K RS+ DSG+
Sbjct: 898  IKPDPRYNKMPRKERETLWRRYAEEMLRKQKFEPDPKEDK-HTDSKNRSANDSGR 951


>ref|XP_007045322.1| Pre-mRNA-processing protein 40C [Theobroma cacao]
           gi|508709257|gb|EOY01154.1| Pre-mRNA-processing protein
           40C [Theobroma cacao]
          Length = 816

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRS 493
           LKPDPRYSK+PRKERE+LWRRYAE+MLRKQ  A D +E+K  T+ KVRSS D G+ S
Sbjct: 751 LKPDPRYSKMPRKEREALWRRYAEDMLRKQKSALDQEEEK-RTDAKVRSSGDLGRFS 806


>ref|XP_002311295.1| FF domain-containing family protein [Populus trichocarpa]
           gi|222851115|gb|EEE88662.1| FF domain-containing family
           protein [Populus trichocarpa]
          Length = 283

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/55 (67%), Positives = 44/55 (80%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LKPDPRY+K+PRKERE+LWRRY EEMLRKQ  + D KED+ +T  K RSS DS +
Sbjct: 230 LKPDPRYNKMPRKERETLWRRYGEEMLRKQKSSPDQKEDR-HTGAKNRSSNDSAR 283


>ref|XP_007221939.1| hypothetical protein PRUPE_ppa001490mg [Prunus persica]
           gi|462418875|gb|EMJ23138.1| hypothetical protein
           PRUPE_ppa001490mg [Prunus persica]
          Length = 814

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LKPDPRY+K+ RKERE LWRR++EEMLRKQ  A D KED+  T+ K RSS+DSG+
Sbjct: 749 LKPDPRYNKMARKEREVLWRRFSEEMLRKQKSALDHKEDR-KTDAKSRSSVDSGR 802


>ref|XP_004159026.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
           40C-like [Cucumis sativus]
          Length = 628

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LKPDPRY K+PRKERE+LWRRYA++ +RKQ LA+D K +K Y + K R++ D+GK
Sbjct: 566 LKPDPRYGKVPRKEREALWRRYADDTVRKQKLANDHKGEK-YNDYKNRATTDAGK 619


>ref|XP_004141751.1| PREDICTED: pre-mRNA-processing protein 40C-like [Cucumis sativus]
          Length = 845

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LKPDPRY K+PRKERE+LWRRYA++ +RKQ LA+D K +K Y + K R++ D+GK
Sbjct: 783 LKPDPRYGKVPRKEREALWRRYADDTVRKQKLANDHKGEK-YNDYKNRATTDAGK 836


>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis vinifera]
            gi|297738259|emb|CBI27460.3| unnamed protein product
            [Vitis vinifera]
          Length = 1046

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            L+ D RY K+PRK+RES+WRRY+EEMLRKQ LA D  E+K +TE K RSS+DSG+
Sbjct: 981  LRSDTRYIKMPRKDRESVWRRYSEEMLRKQKLAQDQTEEK-HTEVKGRSSVDSGR 1034


>ref|XP_006592054.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Glycine
           max]
          Length = 778

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSL 490
           LK DPRY+K+PRKERE+LWRRYAE+MLR+Q  + D +E+K +T+ K R+ L+S K  L
Sbjct: 713 LKSDPRYNKVPRKEREALWRRYAEDMLRRQKASYDSREEK-HTDAKGRTYLESSKHPL 769


>ref|XP_006592053.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
           max]
          Length = 854

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSL 490
           LK DPRY+K+PRKERE+LWRRYAE+MLR+Q  + D +E+K +T+ K R+ L+S K  L
Sbjct: 789 LKSDPRYNKVPRKEREALWRRYAEDMLRRQKASYDSREEK-HTDAKGRTYLESSKHPL 845


>ref|XP_003540642.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
            max]
          Length = 930

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSL 490
            LK DPRY+K+PRKERE+LWRRYAE+MLR+Q  + D +E+K +T+ K R+ L+S K  L
Sbjct: 865  LKSDPRYNKVPRKEREALWRRYAEDMLRRQKASYDSREEK-HTDAKGRTYLESSKHPL 921


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
           gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
           PRP40, putative [Ricinus communis]
          Length = 886

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSLAG 484
           LK DPRY+K+PRKERE LWRR+AE+MLRKQ    D KEDK +T+ + RSS     R L+G
Sbjct: 820 LKLDPRYNKMPRKEREVLWRRHAEDMLRKQKTTLDEKEDK-HTDPRGRSSTTDSGRHLSG 878

Query: 483 S 481
           S
Sbjct: 879 S 879


>ref|XP_004297757.1| PREDICTED: pre-mRNA-processing protein 40C-like [Fragaria vesca
           subsp. vesca]
          Length = 736

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/61 (59%), Positives = 48/61 (78%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSLAG 484
           LK DPRY+K+PRK+RE +W RYAEEMLRKQ  + DP+ED+  ++ K RSS D+G R+ +G
Sbjct: 671 LKSDPRYNKMPRKDREVVWHRYAEEMLRKQKSSLDPREDR-KSDAKSRSSADAG-RATSG 728

Query: 483 S 481
           S
Sbjct: 729 S 729


>gb|AFK45747.1| unknown [Lotus japonicus]
          Length = 109

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 33/55 (60%), Positives = 45/55 (81%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LK DPRY+K+PRKERE+LWRRYAE+M+R+Q  A D +E+K +T+ K R+ L+S K
Sbjct: 44  LKSDPRYNKVPRKEREALWRRYAEDMVRRQKSAHDSREEK-HTDAKGRNPLESSK 97


>ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
            max]
          Length = 968

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            LK DPRY+K+PRKERE+LWRRYAE+MLR+Q  + D +E+K +T+ + R+ L+S K
Sbjct: 903  LKSDPRYNKVPRKEREALWRRYAEDMLRRQKASHDSREEK-HTDAEGRNYLESSK 956


>ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
            max]
          Length = 980

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            LK DPRY+K+PRKERE+LWRRYAE+MLR+Q  + D +E+K +T+ + R+ L+S K
Sbjct: 915  LKSDPRYNKVPRKEREALWRRYAEDMLRRQKASHDSREEK-HTDAEGRNYLESSK 968


>ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citrus clementina]
            gi|557539684|gb|ESR50728.1| hypothetical protein
            CICLE_v10030612mg [Citrus clementina]
          Length = 1015

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            LKPDPRYSK+PRKERE+LWRR+AEE+ RK   + D  ED  + ++K RSS D G+
Sbjct: 950  LKPDPRYSKMPRKEREALWRRHAEEIQRKHKSSLDQNEDN-HKDSKSRSSTDGGR 1003


>gb|EXC33082.1| Transcription elongation regulator 1 [Morus notabilis]
          Length = 829

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = -3

Query: 663 LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
           LKPDPRY+K+PRK+RE+LWRRYAE+MLRKQ  +    ++    + + R+S+DSG+
Sbjct: 763 LKPDPRYNKMPRKDRETLWRRYAEDMLRKQQKSEPNSKEDKKIDPRNRTSVDSGR 817


>ref|XP_003538973.2| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
            max]
          Length = 968

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            LK DPRY+K+PRKERE+LWRRYAE+MLR Q  + D +E+K +T+ + R+ L+S K
Sbjct: 903  LKSDPRYNKVPRKEREALWRRYAEDMLRGQKASHDSREEK-HTDAEGRNYLESSK 956


>ref|XP_006590824.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
            max]
          Length = 980

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGK 499
            LK DPRY+K+PRKERE+LWRRYAE+MLR Q  + D +E+K +T+ + R+ L+S K
Sbjct: 915  LKSDPRYNKVPRKEREALWRRYAEDMLRGQKASHDSREEK-HTDAEGRNYLESSK 968


>ref|XP_004505734.1| PREDICTED: pre-mRNA-processing protein 40C-like [Cicer arietinum]
          Length = 953

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = -3

Query: 663  LKPDPRYSKIPRKERESLWRRYAEEMLRKQNLASDPKEDKLYTETKVRSSLDSGKRSL 490
            LK DPRY+K PRK+RE+LWRRY E+MLR+Q  + D KEDK +T+ + R+S  S K  L
Sbjct: 888  LKSDPRYNKFPRKDREALWRRYVEDMLRRQKSSHDSKEDK-HTDARGRNSQQSSKLPL 944