BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00012158
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, puta...   119   3e-25
ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi...   114   1e-23
emb|CBI16435.3| unnamed protein product [Vitis vinifera]              114   1e-23
gb|EXB48402.1| DNA topoisomerase 6 subunit B [Morus notabilis]        113   3e-23
ref|XP_006445971.1| hypothetical protein CICLE_v10014511mg [Citr...   110   2e-22
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   108   8e-22
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   108   8e-22
ref|XP_004486933.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   108   1e-21
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   106   3e-21
gb|EYU46311.1| hypothetical protein MIMGU_mgv1a002442mg [Mimulus...   106   4e-21
ref|XP_007150404.1| hypothetical protein PHAVU_005G150500g [Phas...   103   2e-20
ref|XP_006850071.1| hypothetical protein AMTR_s00022p00212920 [A...   103   3e-20
ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arab...   102   5e-20
ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Popu...   101   9e-20
ref|XP_004295229.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   101   9e-20
ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Caps...   101   1e-19
ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutr...   100   2e-19
dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Ara...   100   3e-19
ref|XP_007014897.1| Topoisomerase 6 subunit B isoform 2 [Theobro...   100   3e-19
ref|XP_007014896.1| Topoisomerase 6 subunit B isoform 1 [Theobro...   100   3e-19

>ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, putative [Ricinus communis]
           gi|223547352|gb|EEF48847.1| Type II DNA topoisomerase VI
           subunit B, putative [Ricinus communis]
          Length = 656

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/93 (65%), Positives = 72/93 (77%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM    TSKR+RY+ EDAE+L+KVSAR ITKD L EKLA++VE+VD+EMALEYA QSG
Sbjct: 563 LREMAQSQTSKRKRYEDEDAEILKKVSARLITKDTLTEKLAEHVEKVDYEMALEYATQSG 622

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFRFI 280
           VS+ P+E IYIQ LE EN FIDF     +FR I
Sbjct: 623 VSEEPREDIYIQELEIENRFIDFQSPFFIFRLI 655


>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
          Length = 656

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM  L+ SK++RY+ EDA+VL+KVS  +ITK  L EKLAK+VEQVD+EMALEYA QSG
Sbjct: 563 LREMAQLHASKKKRYEDEDADVLRKVSTHSITKQTLSEKLAKHVEQVDYEMALEYATQSG 622

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+E IY+Q+LE   NFIDFH     FR
Sbjct: 623 VSEEPREAIYLQSLEDGKNFIDFHSPVFAFR 653


>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM  L+ SK++RY+ EDA+VL+KVS  +ITK  L EKLAK+VEQVD+EMALEYA QSG
Sbjct: 580 LREMAQLHASKKKRYEDEDADVLRKVSTHSITKQTLSEKLAKHVEQVDYEMALEYATQSG 639

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+E IY+Q+LE   NFIDFH     FR
Sbjct: 640 VSEEPREAIYLQSLEDGKNFIDFHSPVFAFR 670


>gb|EXB48402.1| DNA topoisomerase 6 subunit B [Morus notabilis]
          Length = 642

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/88 (60%), Positives = 72/88 (81%)
 Frame = +2

Query: 11  MVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSGVSK 190
           M  L+ SK++R++ EDAE+L KVSAR +TK+ L EKLA+YVEQVD+EMALEYA QSGVS+
Sbjct: 552 MAQLHASKKKRFEAEDAELLGKVSARVVTKETLMEKLAQYVEQVDYEMALEYATQSGVSE 611

Query: 191 GPKETIYIQALEAENNFIDFHGSSCVFR 274
            P+E+I++Q+LEAE+ ++D H    VFR
Sbjct: 612 EPRESIFLQSLEAEDQYVDLHNPIFVFR 639


>ref|XP_006445971.1| hypothetical protein CICLE_v10014511mg [Citrus clementina]
           gi|568883995|ref|XP_006494721.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Citrus sinensis]
           gi|557548582|gb|ESR59211.1| hypothetical protein
           CICLE_v10014511mg [Citrus clementina]
          Length = 667

 Score =  110 bits (276), Expect = 2e-22
 Identities = 55/93 (59%), Positives = 73/93 (78%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L E+   + SK+RRY+ E+ +VL+KV +R+ITK+ L+E LA+YVE+VD+EMALEYA QSG
Sbjct: 574 LKEISKFHASKKRRYEEEEEDVLRKVQSRSITKETLKEMLAQYVEKVDYEMALEYATQSG 633

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFRFI 280
           V++ P+E IYIQALE   NF D H S+ VFRFI
Sbjct: 634 VNEEPREAIYIQALEDGYNFTDLHSSNFVFRFI 666


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  108 bits (270), Expect = 8e-22
 Identities = 57/91 (62%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM  L+ SK+ RY  +DAE+L KVS   ITK+ L EKL+K+VEQVD+EMALEYA QSG
Sbjct: 580 LKEMTQLHASKKIRYGDDDAELLSKVSENLITKETLCEKLSKHVEQVDYEMALEYATQSG 639

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+ETIYIQ+LEAEN  ID      VFR
Sbjct: 640 VSEEPRETIYIQSLEAENKMIDLQTPFIVFR 670


>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
           gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit
           B [Medicago truncatula]
          Length = 671

 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M+ LN SK+ RY  +D E+L+K+S   +TK+   EKLAK+VEQVD+EMALE+A QSG
Sbjct: 578 LKQMLPLNPSKKSRYGDDDVELLRKISEDLVTKETFSEKLAKHVEQVDYEMALEFATQSG 637

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+ETIYIQAL+AEN  ID H    VFR
Sbjct: 638 VSEEPRETIYIQALDAENKTIDLHAPIFVFR 668


>ref|XP_004486933.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cicer arietinum]
          Length = 669

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M  L+  K+ RY  +D E+L+KVS   ITK+ L EKLAK+VEQVD+EMALEYA QSG
Sbjct: 576 LKQMTQLHPPKKNRYGDDDVELLRKVSENLITKETLCEKLAKHVEQVDYEMALEYATQSG 635

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+ETI+IQ+LEAEN  ID H    VFR
Sbjct: 636 VSEEPRETIFIQSLEAENKMIDLHAPFFVFR 666


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
           gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/93 (56%), Positives = 70/93 (75%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM  ++ SK++R+D EDAE+L KVSAR IT + L++KLA++VEQVDHEMA+EYA QSG
Sbjct: 603 LKEMAQVHASKKKRHDCEDAEILSKVSARLITNETLRDKLAQHVEQVDHEMAMEYATQSG 662

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFRFI 280
            S   KE +YIQ+L+A ++F DF     VFR I
Sbjct: 663 ASAEAKEEMYIQSLDATHSFTDFQSPLFVFRLI 695


>gb|EYU46311.1| hypothetical protein MIMGU_mgv1a002442mg [Mimulus guttatus]
          Length = 674

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/91 (56%), Positives = 73/91 (80%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM   + SK+RRYDG+DAE+L++VSA+ +T++ L+EKLA++VEQVD+EMA+EYA Q+G
Sbjct: 581 LKEMSRAHASKKRRYDGKDAELLKQVSAQLVTQETLREKLAQHVEQVDYEMAMEYATQTG 640

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           V++ P+E IYI  LEA+ +F +FH    VFR
Sbjct: 641 VNEEPREEIYIPPLEAQCSFTEFHSPIFVFR 671


>ref|XP_007150404.1| hypothetical protein PHAVU_005G150500g [Phaseolus vulgaris]
           gi|561023668|gb|ESW22398.1| hypothetical protein
           PHAVU_005G150500g [Phaseolus vulgaris]
          Length = 672

 Score =  103 bits (257), Expect = 2e-20
 Identities = 54/91 (59%), Positives = 67/91 (73%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M  L  +K+ RY  +D E+L+KVS   ITK+ L EKLAK+VEQVD+EMALEYA QSG
Sbjct: 579 LKQMTQLPAAKKIRYGDDDVELLRKVSENLITKETLCEKLAKHVEQVDYEMALEYATQSG 638

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           VS+ P+ETIYIQ+L+AEN  ID      VFR
Sbjct: 639 VSEEPRETIYIQSLDAENKIIDLQTPFFVFR 669


>ref|XP_006850071.1| hypothetical protein AMTR_s00022p00212920 [Amborella trichopoda]
           gi|548853669|gb|ERN11652.1| hypothetical protein
           AMTR_s00022p00212920 [Amborella trichopoda]
          Length = 670

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/92 (55%), Positives = 65/92 (70%)
 Frame = +2

Query: 8   EMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSGVS 187
           E+     SK+R+Y+ ++ E+L KVS R IT+ I++EKL  YVEQVD+EMALEYA QSGVS
Sbjct: 579 EIAKSRDSKQRQYNEKEEEILNKVSCREITEPIIKEKLTHYVEQVDYEMALEYAAQSGVS 638

Query: 188 KGPKETIYIQALEAENNFIDFHGSSCVFRFIL 283
           + P+E IYI ALE    F+D H   CVFR  L
Sbjct: 639 EEPREDIYISALEGAPKFLDLHHPVCVFRLFL 670


>ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arabidopsis lyrata subsp.
           lyrata] gi|297331244|gb|EFH61663.1| hypothetical protein
           ARALYDRAFT_318827 [Arabidopsis lyrata subsp. lyrata]
          Length = 691

 Score =  102 bits (254), Expect = 5e-20
 Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M   +T+KR+RY  ED  +L KVS   ITK+ L+EKLA++VEQVD+EMALEYA QSG
Sbjct: 597 LKQMTEEHTTKRKRYGEEDTVMLNKVSKHIITKETLKEKLAEHVEQVDYEMALEYATQSG 656

Query: 182 VSKGPKETIYIQALEA-ENNFIDFHGSSCVFRFIL 283
           VS+ P+E IY+Q L+  ++NFID H  + VFR +L
Sbjct: 657 VSEEPRENIYLQHLDPNKSNFIDLHSPNFVFRLML 691


>ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Populus trichocarpa]
           gi|550343750|gb|ERP63890.1| hypothetical protein
           POPTR_0003s22040g [Populus trichocarpa]
          Length = 673

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/90 (52%), Positives = 68/90 (75%)
 Frame = +2

Query: 11  MVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSGVSK 190
           M   + SK++RY GE+AE+L  ++A  ITK+ ++EKLA++VE+VD+EMALEYA QSGV++
Sbjct: 583 MSQSHASKKKRYSGEEAEILSNITANLITKETIKEKLAEHVEKVDYEMALEYATQSGVTE 642

Query: 191 GPKETIYIQALEAENNFIDFHGSSCVFRFI 280
            P+E I+IQ L+ EN FI+F     VFR +
Sbjct: 643 EPREDIFIQTLDPENKFIEFQSPIFVFRLV 672


>ref|XP_004295229.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Fragaria vesca
           subsp. vesca]
          Length = 666

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/92 (55%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M  +  SK+RRYD ++AEVL+K+S   ITK++++EKL ++VEQVD EMA+E+A  SG
Sbjct: 572 LKQMQQIQASKKRRYDDKEAEVLKKLSTGMITKEMVKEKLVQHVEQVDSEMAMEFAANSG 631

Query: 182 VSKGPKETIYIQALE-AENNFIDFHGSSCVFR 274
           VS+ P+E IY+Q+LE AE+NFID H    VFR
Sbjct: 632 VSEEPRECIYLQSLEAAEDNFIDLHSPLFVFR 663


>ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Capsella rubella]
           gi|482565842|gb|EOA30031.1| hypothetical protein
           CARUB_v10013135mg [Capsella rubella]
          Length = 670

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M   + +KR+RY  ED  +L KVS   ITK+ L EKLA++VEQVD+EMALEYA QSG
Sbjct: 576 LKQMTEEHKTKRKRYGEEDTAMLDKVSKEIITKETLTEKLAQHVEQVDYEMALEYATQSG 635

Query: 182 VSKGPKETIYIQALEA-ENNFIDFHGSSCVFRFIL 283
           VS+ P+E IY+Q L++ + NFID H  + VFR IL
Sbjct: 636 VSEEPRENIYLQHLDSNKTNFIDLHSPTFVFRLIL 670


>ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutrema salsugineum]
           gi|557107496|gb|ESQ47803.1| hypothetical protein
           EUTSA_v10020214mg [Eutrema salsugineum]
          Length = 671

 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/95 (55%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M   +T+ R+RY  E+  +L+KVS   ITK+ L+EKLA++VEQVD+EMALEYA QSG
Sbjct: 577 LKQMTEEHTTMRKRYREEETAMLEKVSKSIITKETLKEKLAEHVEQVDYEMALEYATQSG 636

Query: 182 VSKGPKETIYIQALEAE-NNFIDFHGSSCVFRFIL 283
           VS+ P+ETIY+Q L    +NFID H  + VFR IL
Sbjct: 637 VSEEPRETIYLQHLNPNTSNFIDLHSPTFVFRLIL 671


>dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Arabidopsis thaliana]
          Length = 694

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/95 (54%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L +M   + +KR+RY  ED  +L KVS + ITK+ L+EKLA++VEQVD+EMALEYA QSG
Sbjct: 600 LKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMALEYATQSG 659

Query: 182 VSKGPKETIYIQALEA-ENNFIDFHGSSCVFRFIL 283
           VS+ P+E IY+Q L+  ++NFID H  + VFR +L
Sbjct: 660 VSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRLML 694


>ref|XP_007014897.1| Topoisomerase 6 subunit B isoform 2 [Theobroma cacao]
           gi|508785260|gb|EOY32516.1| Topoisomerase 6 subunit B
           isoform 2 [Theobroma cacao]
          Length = 513

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/91 (52%), Positives = 69/91 (75%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM   + SK++R +  DA++LQ VS + ITK+ L+EKL ++VE+VD+EMALEYA QSG
Sbjct: 420 LKEMAKSHASKKKRIEERDADILQNVSDQLITKETLKEKLTQHVEKVDYEMALEYATQSG 479

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           V++ P+E +Y+Q+L A++NF DFH    VFR
Sbjct: 480 VNEEPREDMYLQSLYAKSNFFDFHSPIFVFR 510


>ref|XP_007014896.1| Topoisomerase 6 subunit B isoform 1 [Theobroma cacao]
           gi|508785259|gb|EOY32515.1| Topoisomerase 6 subunit B
           isoform 1 [Theobroma cacao]
          Length = 669

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/91 (52%), Positives = 69/91 (75%)
 Frame = +2

Query: 2   LGEMVNLNTSKRRRYDGEDAEVLQKVSARAITKDILQEKLAKYVEQVDHEMALEYAMQSG 181
           L EM   + SK++R +  DA++LQ VS + ITK+ L+EKL ++VE+VD+EMALEYA QSG
Sbjct: 576 LKEMAKSHASKKKRIEERDADILQNVSDQLITKETLKEKLTQHVEKVDYEMALEYATQSG 635

Query: 182 VSKGPKETIYIQALEAENNFIDFHGSSCVFR 274
           V++ P+E +Y+Q+L A++NF DFH    VFR
Sbjct: 636 VNEEPREDMYLQSLYAKSNFFDFHSPIFVFR 666