BLASTX nr result
ID: Cocculus22_contig00011653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00011653
(1217 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 150 8e-34
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 150 8e-34
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 150 1e-33
gb|AFK45150.1| unknown [Lotus japonicus] 150 1e-33
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 150 1e-33
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 150 1e-33
gb|ACU13643.1| unknown [Glycine max] 150 1e-33
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 150 1e-33
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]... 150 1e-33
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 150 1e-33
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 150 1e-33
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 150 1e-33
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 150 1e-33
gb|ABK22541.1| unknown [Picea sitchensis] 150 1e-33
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 149 2e-33
ref|XP_004299870.1| PREDICTED: probable small nuclear ribonucleo... 149 2e-33
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 149 2e-33
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 149 2e-33
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 148 4e-33
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 148 5e-33
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 150 bits (380), Expect = 8e-34
Identities = 70/77 (90%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 150 bits (380), Expect = 8e-34
Identities = 70/77 (90%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 150 bits (379), Expect = 1e-33
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = -2
Query: 526 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNLGE 347
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNLGE
Sbjct: 2 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 61
Query: 346 ILIRCNNVLYLRGVP 302
ILIRCNNVLYLRGVP
Sbjct: 62 ILIRCNNVLYLRGVP 76
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 150 bits (379), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G+FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|593783443|ref|XP_007154762.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 150 bits (379), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G+FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 150 bits (379), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G+FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 150 bits (379), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G+FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 150 bits (379), Expect = 1e-33
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = -2
Query: 526 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNLGE 347
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNLGE
Sbjct: 63 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 122
Query: 346 ILIRCNNVLYLRGVP 302
ILIRCNNVLYLRGVP
Sbjct: 123 ILIRCNNVLYLRGVP 137
>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
gi|195650409|gb|ACG44672.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935831|gb|AFW70382.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 107
Score = 150 bits (379), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+Q+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 22 VQTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 81
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+YLRGVP
Sbjct: 82 GEILIRCNNVMYLRGVP 98
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 150 bits (378), Expect = 1e-33
Identities = 70/77 (90%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+ +GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 150 bits (378), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 150 bits (378), Expect = 1e-33
Identities = 69/77 (89%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 150 bits (378), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 150 bits (378), Expect = 1e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEE+IDG+FTGNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEVLIRCNNVLYLRGVP 77
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 149 bits (377), Expect = 2e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EE+IDG+FTGNL
Sbjct: 1 MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_004299870.1| PREDICTED: probable small nuclear ribonucleoprotein F-like isoform
2 [Fragaria vesca subsp. vesca]
Length = 88
Score = 149 bits (376), Expect = 2e-33
Identities = 69/77 (89%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+Q++PVNPKPFLNNLTGK V VKLKWGMEYKG+LVSVDSYMNLQLANTEE+IDG+FTGNL
Sbjct: 1 MQTIPVNPKPFLNNLTGKTVFVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 149 bits (376), Expect = 2e-33
Identities = 68/77 (88%), Positives = 76/77 (98%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+Y+RGVP
Sbjct: 61 GEILIRCNNVMYMRGVP 77
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 149 bits (376), Expect = 2e-33
Identities = 68/77 (88%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ ++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNVLY+RGVP
Sbjct: 61 GEILIRCNNVLYMRGVP 77
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 148 bits (374), Expect = 4e-33
Identities = 68/77 (88%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 148 bits (373), Expect = 5e-33
Identities = 67/77 (87%), Positives = 75/77 (97%)
Frame = -2
Query: 532 LQSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEHIDGKFTGNL 353
+ +VPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG+F+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 352 GEILIRCNNVLYLRGVP 302
GEILIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77