BLASTX nr result
ID: Cocculus22_contig00011478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00011478
(960 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259... 100 9e-19
ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259... 100 9e-19
ref|XP_004159060.1| PREDICTED: la-related protein 7-like [Cucumi... 89 2e-15
ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207... 89 2e-15
gb|EXB88277.1| La-related protein 7 [Morus notabilis] 89 3e-15
ref|XP_006577368.1| PREDICTED: la-related protein 6-like isoform... 88 4e-15
ref|XP_003521844.1| PREDICTED: la-related protein 6-like isoform... 88 4e-15
ref|XP_007139081.1| hypothetical protein PHAVU_009G2633000g, par... 87 8e-15
ref|XP_003554803.1| PREDICTED: la-related protein 6-like isoform... 87 8e-15
ref|XP_007026489.1| RNA-binding protein, putative isoform 3 [The... 86 2e-14
ref|XP_007026488.1| RNA-binding protein, putative isoform 2 [The... 86 2e-14
ref|XP_007026487.1| RNA-binding protein, putative isoform 1 [The... 86 2e-14
ref|XP_007202011.1| hypothetical protein PRUPE_ppa005181mg [Prun... 85 4e-14
ref|XP_004287183.1| PREDICTED: uncharacterized protein LOC101304... 84 1e-13
ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu... 84 1e-13
ref|XP_002443059.1| hypothetical protein SORBIDRAFT_08g007220 [S... 82 3e-13
ref|XP_004960758.1| PREDICTED: la-related protein 6-like [Setari... 81 5e-13
ref|XP_006664435.1| PREDICTED: la-related protein 7-like [Oryza ... 80 9e-13
ref|XP_006380252.1| hypothetical protein POPTR_0007s00450g [Popu... 80 9e-13
ref|XP_002310383.2| hypothetical protein POPTR_0007s00450g [Popu... 80 9e-13
>ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259405 isoform 2 [Vitis
vinifera]
Length = 438
Score = 100 bits (249), Expect = 9e-19
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 21/114 (18%)
Frame = -1
Query: 279 IHVFPVQTSPFGIPYQNY---------------------GAFPEHXXXXXXXXXXXXXVD 163
+ V+P +SPF +P QN+ G F +H D
Sbjct: 64 VPVYPGPSSPFHVPIQNHHQHQQHHHHHVQYHQYHQYYGGGFGDHPEGVGQAHQASADSD 123
Query: 162 HVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
HV + NGLS+EV KILNQVEYYFSD+NL TT+HL+RFINKDP+G+VPISVVA
Sbjct: 124 HVAASRNGLSEEVTQKILNQVEYYFSDVNLATTEHLMRFINKDPEGYVPISVVA 177
>ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis
vinifera]
Length = 454
Score = 100 bits (249), Expect = 9e-19
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 21/114 (18%)
Frame = -1
Query: 279 IHVFPVQTSPFGIPYQNY---------------------GAFPEHXXXXXXXXXXXXXVD 163
+ V+P +SPF +P QN+ G F +H D
Sbjct: 64 VPVYPGPSSPFHVPIQNHHQHQQHHHHHVQYHQYHQYYGGGFGDHPEGVGQAHQASADSD 123
Query: 162 HVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
HV + NGLS+EV KILNQVEYYFSD+NL TT+HL+RFINKDP+G+VPISVVA
Sbjct: 124 HVAASRNGLSEEVTQKILNQVEYYFSDVNLATTEHLMRFINKDPEGYVPISVVA 177
>ref|XP_004159060.1| PREDICTED: la-related protein 7-like [Cucumis sativus]
Length = 356
Score = 89.4 bits (220), Expect = 2e-15
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
D+ P+ + L+DEV K+LNQVEYYFSDLNL TTDHL+RF+NKDPDG+VPISVVA
Sbjct: 153 DYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVA 207
>ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207485 [Cucumis sativus]
Length = 492
Score = 89.4 bits (220), Expect = 2e-15
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
D+ P+ + L+DEV K+LNQVEYYFSDLNL TTDHL+RF+NKDPDG+VPISVVA
Sbjct: 153 DYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVA 207
>gb|EXB88277.1| La-related protein 7 [Morus notabilis]
Length = 480
Score = 88.6 bits (218), Expect = 3e-15
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH P+ N LSD+ K+LNQVEYYFSDLNL TTDHL+RFI+KDP+GFVPISVVA
Sbjct: 143 DHSAPSKNKLSDDATLKLLNQVEYYFSDLNLATTDHLMRFISKDPEGFVPISVVA 197
>ref|XP_006577368.1| PREDICTED: la-related protein 6-like isoform X2 [Glycine max]
Length = 366
Score = 88.2 bits (217), Expect = 4e-15
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH P S +SDE KILNQVEYYFSDLNL TTDHL+RFINKDP+GFVPISVVA
Sbjct: 146 DHAPSKSK-MSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVA 199
>ref|XP_003521844.1| PREDICTED: la-related protein 6-like isoformX1 [Glycine max]
Length = 475
Score = 88.2 bits (217), Expect = 4e-15
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH P S +SDE KILNQVEYYFSDLNL TTDHL+RFINKDP+GFVPISVVA
Sbjct: 146 DHAPSKSK-MSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVA 199
>ref|XP_007139081.1| hypothetical protein PHAVU_009G2633000g, partial [Phaseolus
vulgaris] gi|561012168|gb|ESW11075.1| hypothetical
protein PHAVU_009G2633000g, partial [Phaseolus vulgaris]
Length = 332
Score = 87.4 bits (215), Expect = 8e-15
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
D + + + LSDE KILNQVEYYFSDLNL TTDHL+RFINKDP+GFVPISVVA
Sbjct: 130 DRISSSKSKLSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVA 184
>ref|XP_003554803.1| PREDICTED: la-related protein 6-like isoform 1 [Glycine max]
Length = 467
Score = 87.4 bits (215), Expect = 8e-15
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH + + +SDE KILNQVEYYFSDLNL TTDHL+RF+NKDP+GFVPISVVA
Sbjct: 137 DHALSSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFVNKDPEGFVPISVVA 191
>ref|XP_007026489.1| RNA-binding protein, putative isoform 3 [Theobroma cacao]
gi|508715094|gb|EOY06991.1| RNA-binding protein,
putative isoform 3 [Theobroma cacao]
Length = 501
Score = 85.9 bits (211), Expect = 2e-14
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -1
Query: 150 ASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
+ NGLS+E KILNQVEYYFSDLNL TTDHL+RFINKDP+G+VPISVVA
Sbjct: 165 SKNGLSEEATLKILNQVEYYFSDLNLATTDHLMRFINKDPEGYVPISVVA 214
>ref|XP_007026488.1| RNA-binding protein, putative isoform 2 [Theobroma cacao]
gi|508715093|gb|EOY06990.1| RNA-binding protein,
putative isoform 2 [Theobroma cacao]
Length = 431
Score = 85.9 bits (211), Expect = 2e-14
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -1
Query: 150 ASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
+ NGLS+E KILNQVEYYFSDLNL TTDHL+RFINKDP+G+VPISVVA
Sbjct: 96 SKNGLSEEATLKILNQVEYYFSDLNLATTDHLMRFINKDPEGYVPISVVA 145
>ref|XP_007026487.1| RNA-binding protein, putative isoform 1 [Theobroma cacao]
gi|508715092|gb|EOY06989.1| RNA-binding protein,
putative isoform 1 [Theobroma cacao]
Length = 500
Score = 85.9 bits (211), Expect = 2e-14
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -1
Query: 150 ASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
+ NGLS+E KILNQVEYYFSDLNL TTDHL+RFINKDP+G+VPISVVA
Sbjct: 165 SKNGLSEEATLKILNQVEYYFSDLNLATTDHLMRFINKDPEGYVPISVVA 214
>ref|XP_007202011.1| hypothetical protein PRUPE_ppa005181mg [Prunus persica]
gi|462397542|gb|EMJ03210.1| hypothetical protein
PRUPE_ppa005181mg [Prunus persica]
Length = 473
Score = 85.1 bits (209), Expect = 4e-14
Identities = 43/58 (74%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = -1
Query: 165 DHVPPASNG---LSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH +S+ LSDE KILNQVEYYFSDLNL TTDHL+RFINKDP+GFVPISVVA
Sbjct: 135 DHASSSSSKTHKLSDEATSKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVA 192
>ref|XP_004287183.1| PREDICTED: uncharacterized protein LOC101304608 [Fragaria vesca
subsp. vesca]
Length = 454
Score = 83.6 bits (205), Expect = 1e-13
Identities = 41/56 (73%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 DHVPPA-SNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH + S+ LSDE K+LNQVEYYFSDLNL TTDHL+RFI+KDP+GFVPISVVA
Sbjct: 112 DHATSSKSHKLSDEATSKVLNQVEYYFSDLNLATTDHLMRFISKDPEGFVPISVVA 167
>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
putative [Ricinus communis]
Length = 524
Score = 83.6 bits (205), Expect = 1e-13
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -1
Query: 165 DHVPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
DH+ +DE K+LNQVEYYFSDLNL TTDHL+RFINKDPDG+VPISVVA
Sbjct: 189 DHMSKNDRNGNDEPMQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVA 243
>ref|XP_002443059.1| hypothetical protein SORBIDRAFT_08g007220 [Sorghum bicolor]
gi|241943752|gb|EES16897.1| hypothetical protein
SORBIDRAFT_08g007220 [Sorghum bicolor]
Length = 489
Score = 82.0 bits (201), Expect = 3e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -1
Query: 153 PASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
P +GL DEV HKI QVEYYFSD+NL TT+HL+RFI KDP+G+VPISV+A
Sbjct: 126 PVVDGLDDEVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVIA 176
>ref|XP_004960758.1| PREDICTED: la-related protein 6-like [Setaria italica]
Length = 494
Score = 81.3 bits (199), Expect = 5e-13
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 6/59 (10%)
Frame = -1
Query: 159 VPPAS------NGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
+PPA+ +GL DEV HKI QVEYYFSD+NL TT+HL+RFI KDP+G+VPISV+A
Sbjct: 118 LPPAAKAEQAVDGLEDEVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVIA 176
>ref|XP_006664435.1| PREDICTED: la-related protein 7-like [Oryza brachyantha]
Length = 402
Score = 80.5 bits (197), Expect = 9e-13
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -1
Query: 159 VPPASNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
V P +GL DEV HKI QVE+YFSD+NL TT+HL+RFI KDP+G+VPI+V+A
Sbjct: 33 VEPLGDGLPDEVVHKITKQVEFYFSDINLATTEHLMRFITKDPEGYVPITVIA 85
>ref|XP_006380252.1| hypothetical protein POPTR_0007s00450g [Populus trichocarpa]
gi|550333822|gb|ERP58049.1| hypothetical protein
POPTR_0007s00450g [Populus trichocarpa]
Length = 461
Score = 80.5 bits (197), Expect = 9e-13
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 147 SNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
S+ SDE +K+LNQVEYYFSDLNL TTDHL+RFI KDP+G+VPISVVA
Sbjct: 181 SDSKSDEAMNKLLNQVEYYFSDLNLATTDHLMRFITKDPEGYVPISVVA 229
>ref|XP_002310383.2| hypothetical protein POPTR_0007s00450g [Populus trichocarpa]
gi|550333821|gb|EEE90833.2| hypothetical protein
POPTR_0007s00450g [Populus trichocarpa]
Length = 516
Score = 80.5 bits (197), Expect = 9e-13
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 147 SNGLSDEVCHKILNQVEYYFSDLNLVTTDHLIRFINKDPDGFVPISVVA 1
S+ SDE +K+LNQVEYYFSDLNL TTDHL+RFI KDP+G+VPISVVA
Sbjct: 181 SDSKSDEAMNKLLNQVEYYFSDLNLATTDHLMRFITKDPEGYVPISVVA 229