BLASTX nr result
ID: Cocculus22_contig00011249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00011249
(478 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera] 70 2e-17
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 64 1e-16
gb|ABI34306.1| Polyprotein, putative [Solanum demissum] 62 2e-15
emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera] 65 2e-14
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 64 3e-14
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] 62 7e-14
emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera] 55 1e-13
ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293... 63 4e-13
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 55 8e-13
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera] 57 1e-12
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 64 2e-12
gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polypro... 54 6e-12
emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group] 54 1e-11
emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group] 54 1e-11
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 57 2e-11
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group] 55 2e-11
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 57 2e-11
gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sa... 54 2e-11
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 57 2e-11
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 55 3e-11
>emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera]
Length = 338
Score = 70.5 bits (171), Expect(2) = 2e-17
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = -1
Query: 472 KAFGLDFLILKM-NPRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTKPL 296
K+FGLD+L + N + + + FWKEAI +EIESI+ KL+DLP KPL
Sbjct: 75 KSFGLDYLTYMLDNEPKTFKEAMSTPEAPFWKEAINNEIESIMHNHTWKLMDLPPGNKPL 134
Query: 295 RCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
CK IFK + K +G+I K + +L+A GFK++
Sbjct: 135 GCKWIFKKKMKPDGTIDKYKARLVAKGFKQK 165
Score = 44.3 bits (103), Expect(2) = 2e-17
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIA------MKAIKMNVKKTVLNGGLKEEI 75
K LDFF+T SP+T +TS R LIA +K +M+ K T LNG L+EEI
Sbjct: 165 KEGLDFFDTYSPVTRITSIRXLIARTTLHNLKIHQMDAKTTFLNGELEEEI 215
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 63.5 bits (153), Expect(2) = 1e-16
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -1
Query: 388 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 209
FWKEAI SEIESI+ KLVDLP K L CK IFK + K +G+I K + +L+A GFK
Sbjct: 493 FWKEAINSEIESIMHNHTWKLVDLPPGNKHLGCKWIFKKKMKPDGTIDKYKARLVAKGFK 552
Query: 208 KE 203
++
Sbjct: 553 QK 554
Score = 48.5 bits (114), Expect(2) = 1e-16
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 6/51 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
K SLDFF+T SP+T +TS RVLIA+ A+ +M+VK T LNG L+E+I
Sbjct: 554 KESLDFFDTYSPVTRITSIRVLIAIVALHNLEIHQMDVKTTFLNGELEEKI 604
>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
Length = 1691
Score = 61.6 bits (148), Expect(2) = 2e-15
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = -1
Query: 478 VAKAFGLDFLILKM-NPRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTK 302
V K FG DF + + + R + + L FWKEA+ E+ES++ KLVDLP K
Sbjct: 767 VEKDFGPDFYVFNVGDDRLTLKEALSSHDSIFWKEAVNDEMESLISNKTWKLVDLPPGCK 826
Query: 301 PLRCKSIFK*EFKANGSITKDEVKLIA*GFKK 206
+ CK + + + K +GSI K + +L+A GFK+
Sbjct: 827 TIGCKWVLRKKLKPDGSIDKYKARLVAKGFKQ 858
Score = 45.8 bits (107), Expect(2) = 2e-15
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
L+FF+T SP+T +TS R+LIAM AI +M+VK LNG L EEI
Sbjct: 862 LEFFDTFSPVTRITSIRLLIAMAAIFDLQIHQMDVKTAFLNGDLNEEI 909
>emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera]
Length = 965
Score = 65.1 bits (157), Expect(2) = 2e-14
Identities = 41/87 (47%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Frame = -1
Query: 442 KMNPRHSKRHCLHKML--------ICFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCK 287
K PR SKR L FWKEAI SEIESI+ +LVDLP K + CK
Sbjct: 505 KFEPRRSKRDKKETNLRDAISSPDAPFWKEAINSEIESIMYNHTWELVDLPPGVKTIGCK 564
Query: 286 SIFK*EFKANGSITKDEVKLIA*GFKK 206
IFK + K NGSI K + +L+A GFK+
Sbjct: 565 WIFKSKLKQNGSIEKYKARLVAKGFKQ 591
Score = 39.3 bits (90), Expect(2) = 2e-14
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEICV 69
+ +D+FNT + +T + S RVLIA+ +I +M+VK LNG L+EEI +
Sbjct: 592 RNEVDYFNTFAHVTRLASIRVLIALASIHNLVIHQMDVKIAFLNGDLEEEIYI 644
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 63.9 bits (154), Expect(2) = 3e-14
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -1
Query: 472 KAFGLDFL--ILKMNPRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTKP 299
K+FG DFL +L+ P+ K ++ WKEAIKSEI+SILQ +LVDLP KP
Sbjct: 582 KSFGPDFLTFMLEGEPQTFKE-AVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKP 640
Query: 298 LRCKSIFK*EFKANGSITKDEVKLIA*GFKK 206
L K IFK + K +GSI K + +L+ G+++
Sbjct: 641 LSSKWIFKRKMKVDGSIDKYKARLVIKGYRQ 671
Score = 39.7 bits (91), Expect(2) = 3e-14
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAIK------MNVKKTVLNGGLKEEI 75
LD+F+T SP+T + S R+++A+ A++ M+VK LNG L EEI
Sbjct: 675 LDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEI 722
>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
Length = 1096
Score = 61.6 bits (148), Expect(2) = 7e-14
Identities = 37/86 (43%), Positives = 52/86 (60%)
Frame = -1
Query: 463 GLDFLILKMNPRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKS 284
G ++ NPR S + + + FWKEAI SEIESI+ +LV+LP K + CK
Sbjct: 595 GFYTFLIDDNPR-SYKEVITSLDASFWKEAINSEIESIMCNHTWELVNLPPGAKTIGCKW 653
Query: 283 IFK*EFKANGSITKDEVKLIA*GFKK 206
IFK + K +GSI K + +L+A GFK+
Sbjct: 654 IFKRKLKQDGSIEKYKARLVAKGFKQ 679
Score = 40.8 bits (94), Expect(2) = 7e-14
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 14/76 (18%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI--------CVPW 63
+D+F+T +P+T + S RVLIA+ +I +M+VK LNG L+EEI VP
Sbjct: 683 VDYFDTFAPVTRIASIRVLIALASIHNLVIHQMDVKIAFLNGDLEEEIYMDQPEGCVVPR 742
Query: 62 KSLIKCE*TDSQWNLS 15
K C+ S + L+
Sbjct: 743 KEKNVCKLVKSPYGLT 758
>emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera]
Length = 167
Score = 55.5 bits (132), Expect(2) = 1e-13
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = -1
Query: 388 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 209
+W+EA+ EI SI+Q +LV+LP KP+ CK IFK + + NG+I K + L+A G++
Sbjct: 8 YWQEAVNDEINSIMQNHTWELVNLPPGNKPIGCKWIFKRKLQTNGTIDKYKAHLVAKGYR 67
Query: 208 KE 203
++
Sbjct: 68 QK 69
Score = 46.6 bits (109), Expect(2) = 1e-13
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
K LDFF+T SP+T +TS R+LIA AI +M+VK T LNG L EEI
Sbjct: 69 KEGLDFFDTYSPVTRITSIRMLIATTAIHNFEIHQMDVKITFLNGDLDEEI 119
>ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293311 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 62.8 bits (151), Expect(2) = 4e-13
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = -1
Query: 472 KAFGLDFLILKMNPRHSK-RHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTKPL 296
K FG DF++ + + + + FWKEAI SE+ESILQ +L +LP T+P+
Sbjct: 574 KNFGEDFVVFHIEGDPATYKEAMASSDAPFWKEAINSEVESILQNHTWELTNLPPGTRPI 633
Query: 295 RCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
CK +F+ + K +GSI K + +L+A GF ++
Sbjct: 634 GCKWVFRKKLKPDGSIDKYKARLVAKGFTQK 664
Score = 37.4 bits (85), Expect(2) = 4e-13
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
K +D+F+T S ++ +T+ R LIA+ +I +M+VK LNG L EEI
Sbjct: 664 KKGIDYFDTYSRVSSITTIRTLIALASIHDLVIHQMDVKTAFLNGDLDEEI 714
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 54.7 bits (130), Expect(2) = 8e-13
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = -1
Query: 385 WKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFKK 206
W +AIK+E+ESI + LVDLP KP+ CK IFK ++ +GSI K + +L+A GF +
Sbjct: 784 WDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQ 843
Query: 205 E 203
+
Sbjct: 844 K 844
Score = 44.3 bits (103), Expect(2) = 8e-13
Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 6/51 (11%)
Frame = -3
Query: 209 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
K ++D+F+T +P+T ++S RVL+A+ +I +M+VK T LNG L+EEI
Sbjct: 844 KHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEI 894
>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
Length = 635
Score = 57.4 bits (137), Expect(2) = 1e-12
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = -1
Query: 388 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 209
FWKEAI SEIESI+ +LVDLP K + K IFK + K +GSI K + +L+A GFK
Sbjct: 233 FWKEAINSEIESIMYNHTCELVDLPPGAKTIGFKWIFKRKLKQDGSIEKYKARLVAKGFK 292
Query: 208 K 206
+
Sbjct: 293 Q 293
Score = 40.8 bits (94), Expect(2) = 1e-12
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Frame = -3
Query: 203 SLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
++D+F+T +P+T + S RVL+A+ +I +M+VK LNG L+EEI
Sbjct: 296 NIDYFDTFAPVTRIXSIRVLLALASIHNLVIHQMDVKTAFLNGDLEEEI 344
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -1
Query: 472 KAFGLDFL--ILKMNPRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCTKP 299
K+FG DFL +L+ P+ K ++ WKEAIKSEI+SILQ +LVDLP KP
Sbjct: 799 KSFGPDFLTFMLEGEPQTFKE-AVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKP 857
Query: 298 LRCKSIFK*EFKANGSITKDEVKLIA*GFKK 206
L K IFK + K +GSI K + +L+ G+++
Sbjct: 858 LSSKWIFKRKMKVDGSIDKYKARLVIKGYRQ 888
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAIK------MNVKKTVLN-------GGLKEEICVPWK 60
LD+F+T SP+T + S R+++A+ A++ M++K+ + G ++++C K
Sbjct: 892 LDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMKEIYMEQPEGFSAPGQEKKVCKLVK 951
Query: 59 SLIKCE*TDSQWNLSF 12
SL + QW+ F
Sbjct: 952 SLYGLKQAPKQWHEKF 967
>gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polyprotein from transposon Tnt
1-94 [Oryza sativa Japonica Group]
gi|31431305|gb|AAP53107.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 536
Score = 53.5 bits (127), Expect(2) = 6e-12
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -1
Query: 478 VAKAFGLDFLILKMN--PRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCT 305
VAK+FG D+++ ++ PR + +WKEA++SE++SI+ ++V+ P
Sbjct: 36 VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 94
Query: 304 KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 95 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 128
Score = 42.4 bits (98), Expect(2) = 6e-12
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEICV 69
DFF+T SP+ +T+ RVL+A+ A +M+VK LNG L+EEIC+
Sbjct: 132 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEICM 180
>emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group]
Length = 1200
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = -1
Query: 478 VAKAFGLDFLILKMNPRHSKRHCLHKMLIC-FWKEAIKSEIESILQC*IQKLVDLPSCTK 302
VAK+FG D+++ ++ ++ L +WKEA+ SE++SI+ ++V+ P K
Sbjct: 749 VAKSFGDDYIVYLVDDTPRTIEEVYSSLDADYWKEAVHSEMDSIMSNVTWEVVERPYGCK 808
Query: 301 PLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
P+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 809 PVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 841
Score = 40.4 bits (93), Expect(2) = 1e-11
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
DFF+T SP+ ++T+ RVL+A+ A +M+VK LNG L+EEI
Sbjct: 845 DFFDTYSPVALLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 891
>emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group]
Length = 1200
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = -1
Query: 478 VAKAFGLDFLILKMNPRHSKRHCLHKMLIC-FWKEAIKSEIESILQC*IQKLVDLPSCTK 302
VAK+FG D+++ ++ ++ L +WKEA+ SE++SI+ ++V+ P K
Sbjct: 749 VAKSFGDDYIVYLVDDTPRTIEEVYSSLDADYWKEAVHSEMDSIMSNGTWEVVERPYGCK 808
Query: 301 PLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
P+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 809 PVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 841
Score = 40.4 bits (93), Expect(2) = 1e-11
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
DFF+T SP+ ++T+ RVL+A+ A +M+VK LNG L+EEI
Sbjct: 845 DFFDTYSPVALLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 891
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = -1
Query: 394 ICFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*G 215
+ FWKEAI E++SI+ +LVDLP +KP+ CK +F+ ++ +G I + +L+A G
Sbjct: 813 VAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKG 872
Query: 214 FKK 206
FK+
Sbjct: 873 FKQ 875
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
+D+F+T +P+ TS R+L A+ +I +M+VK LNG L EE+
Sbjct: 879 IDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEV 926
>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 55.5 bits (132), Expect(2) = 2e-11
Identities = 31/94 (32%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 478 VAKAFGLDFLILKMN--PRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCT 305
VAK+FG D+++ ++ PR + +WKEA++SE++SI+ ++V+ P
Sbjct: 856 VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVECPYGC 914
Query: 304 KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
KP+ CK +FK + + +G+I K +V+L+A G+ ++
Sbjct: 915 KPVGCKWVFKKKLRPDGTIEKYKVRLVAKGYTQK 948
Score = 38.5 bits (88), Expect(2) = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
DFF+T SP+ +T+ RVL+A+ A +M+VK LNG L+EEI
Sbjct: 952 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 998
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = -1
Query: 394 ICFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*G 215
+ FWKEAI E++SI+ +LVDLP +KP+ CK +F+ ++ +G I + +L+A G
Sbjct: 703 VAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKG 762
Query: 214 FKK 206
FK+
Sbjct: 763 FKQ 765
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
+D+F+T +P+ TS R+L A+ +I +M+VK LNG L EE+
Sbjct: 769 IDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEV 816
>gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31429942|gb|AAP51926.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1109
Score = 53.5 bits (127), Expect(2) = 2e-11
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -1
Query: 478 VAKAFGLDFLILKMN--PRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCT 305
VAK+FG D+++ ++ PR + +WKEA++SE++SI+ ++V+ P
Sbjct: 861 VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 919
Query: 304 KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 920 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 953
Score = 40.4 bits (93), Expect(2) = 2e-11
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
DFFNT SP+ +T+ RVL+A+ A +M+VK LNG L+EEI
Sbjct: 957 DFFNTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 1003
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = -1
Query: 394 ICFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*G 215
+ FWKEAI E++SI+ +LVDLP +KP+ CK +F+ ++ +G I + +L+A G
Sbjct: 606 VAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKG 665
Query: 214 FKK 206
FK+
Sbjct: 666 FKQ 668
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = -3
Query: 200 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
+D+F+T +P+ TS R+L A+ +I +M+VK LNG L EE+
Sbjct: 672 IDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEV 719
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 55.1 bits (131), Expect(2) = 3e-11
Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 478 VAKAFGLDFLILKMN--PRHSKRHCLHKMLICFWKEAIKSEIESILQC*IQKLVDLPSCT 305
VAK+FG D+++ ++ PR + + +WKEA++SE++SI+ ++V+ P
Sbjct: 919 VAKSFGDDYIVYLVDDTPR-TIEEAYSSLDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 977
Query: 304 KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 203
KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 978 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 1011
Score = 38.5 bits (88), Expect(2) = 3e-11
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Frame = -3
Query: 197 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 75
DFF+T SP+ +T+ RVL+A+ A +M+VK LNG L+EEI
Sbjct: 1015 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 1061