BLASTX nr result

ID: Cocculus22_contig00011230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00011230
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...    61   2e-07
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...    60   2e-07
gb|AGM20684.1| PFT [Populus tomentosa]                                 59   7e-07
gb|AAF65166.2|AF166494_1 putative phloem transcription factor M1...    59   7e-07
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...    59   9e-07
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...    59   9e-07
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...    56   6e-06
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...    56   6e-06
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...    56   6e-06
ref|XP_007153353.1| hypothetical protein PHAVU_003G028300g [Phas...    55   8e-06

>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
           gi|550332870|gb|EEE88812.2| hypothetical protein
           POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVGTG+GQ Y+QG GRSQL+SQG VS+QGP++M GGG
Sbjct: 856 MVGTGMGQTYVQGPGRSQLVSQGQVSSQGPANMSGGG 892


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
           trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
           FLOWERING TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           M GTG+GQ Y+QG GR QL+SQG VS+QGP++MPGGG
Sbjct: 757 MAGTGMGQTYVQGPGRPQLVSQGQVSSQGPANMPGGG 793


>gb|AGM20684.1| PFT [Populus tomentosa]
          Length = 889

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           M GTG+G+ Y+QG GR QL+SQG VS+QGP++MPGGG
Sbjct: 850 MAGTGMGRTYVQGPGRPQLVSQGQVSSQGPANMPGGG 886


>gb|AAF65166.2|AF166494_1 putative phloem transcription factor M1 [Apium graveolens]
          Length = 353

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGGSFLT 259
           MVGTG+GQAY+QG GRSQ++SQG V++QGP +M GGG +L+
Sbjct: 314 MVGTGMGQAYVQGQGRSQMVSQGQVTSQGP-TMSGGGGYLS 353


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
           [Theobroma cacao] gi|508710227|gb|EOY02124.1|
           Phytochrome and flowering time regulatory protein
           isoform 2 [Theobroma cacao]
          Length = 860

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG+G+G AY+QG GRSQL+SQG VS+Q P +MPGGG
Sbjct: 821 MVGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGG 857


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
           [Theobroma cacao] gi|508710226|gb|EOY02123.1|
           Phytochrome and flowering time regulatory protein
           isoform 1 [Theobroma cacao]
          Length = 871

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG+G+G AY+QG GRSQL+SQG VS+Q P +MPGGG
Sbjct: 832 MVGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGG 868


>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Glycine max]
          Length = 877

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG+G+GQAY+QG GRSQL+SQG VS+QG +++ GGG
Sbjct: 838 MVGSGMGQAYVQGPGRSQLVSQGQVSSQGATNIGGGG 874


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG+G+GQ Y+QG GR+QL+SQG VS+QG  ++PGGG
Sbjct: 790 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGG 826


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
           gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
           hypothetical protein CICLE_v10030710mg [Citrus
           clementina]
          Length = 830

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG+G+GQ Y+QG GR+QL+SQG VS+QG  ++PGGG
Sbjct: 791 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGG 827


>ref|XP_007153353.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
           gi|561026707|gb|ESW25347.1| hypothetical protein
           PHAVU_003G028300g [Phaseolus vulgaris]
          Length = 863

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +2

Query: 137 MVGTGIGQAYMQGSGRSQLMSQGPVSAQGPSSMPGGG 247
           MVG G+GQAY+QG GRSQL+SQG VS+QG +++ GGG
Sbjct: 824 MVGAGMGQAYVQGPGRSQLVSQGQVSSQGTTNIGGGG 860


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