BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00011210
         (385 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Popu...    91   2e-16
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    90   4e-16
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    87   2e-15
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...    72   1e-10
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              70   2e-10
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    68   2e-09
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    68   2e-09
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]    64   2e-08
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              63   5e-08
emb|CAN67751.1| hypothetical protein VITISV_030106 [Vitis vinifera]    61   2e-07
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali...    59   5e-07
emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera]    59   7e-07
emb|CAN65853.1| hypothetical protein VITISV_004966 [Vitis vinifera]    59   9e-07
ref|XP_006389056.1| hypothetical protein POPTR_0052s00200g [Popu...    57   2e-06
ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594...    57   3e-06

>ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Populus trichocarpa]
           gi|550339140|gb|ERP61289.1| hypothetical protein
           POPTR_0005s16705g [Populus trichocarpa]
          Length = 397

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYD--RIESEKSEL 175
           R WQ+DR+  +DGFKN+Y     G+  TL PL+P+QVYE+QM LK+++D  ++++E   L
Sbjct: 268 RLWQFDRKAKHDGFKNKYFLEKDGRVYTLAPLSPKQVYEEQMRLKKDFDLKQLQTEHHGL 327

Query: 176 RXXXXXXXXXXXXXXXXXXXXITTKKEQNVSDERKTKKNMSFYARESDIKRAFHASRPMI 355
           +                    +  +KE+     +K +K+++FYA+ +DIK A+ +  PMI
Sbjct: 328 K-------------ASSGEKKVRVRKEECT---KKVRKHLNFYAKPNDIKHAYFSEMPMI 371

Query: 356 VLVYKEA 376
           +L+YKEA
Sbjct: 372 LLMYKEA 378


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 50/124 (40%), Positives = 66/124 (53%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSELRX 181
           RPWQ+DR+V +DGFKNRY F  + K  TLVPLTPRQ  E +   + E             
Sbjct: 505 RPWQFDRKVNHDGFKNRYSFIKNNKTITLVPLTPRQKKESENXKESE------------- 551

Query: 182 XXXXXXXXXXXXXXXXXXXITTKKEQNVSDERKTKKNMSFYARESDIKRAFHASRPMIVL 361
                                 KK ++  +ERKTKK  SFYA+ SD+K AF+ ++P+ VL
Sbjct: 552 ----------------------KKIESGKNERKTKKQGSFYAKASDVKNAFYTNQPIFVL 589

Query: 362 VYKE 373
           +YKE
Sbjct: 590 LYKE 593


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/127 (37%), Positives = 67/127 (52%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSELRX 181
           RPWQYDRRV +DG+ NRY F ++ +  TLVPLTPRQVYEDQ+ +                
Sbjct: 322 RPWQYDRRVTHDGYLNRYSFVINKRKITLVPLTPRQVYEDQINIV--------------- 366

Query: 182 XXXXXXXXXXXXXXXXXXXITTKKEQNVSDERKTKKNMSFYARESDIKRAFHASRPMIVL 361
                                         ERK ++ ++ +A+ES++KRAF + +P++VL
Sbjct: 367 ------------------------------ERKERQQVNLFAKESEVKRAFFSKQPIVVL 396

Query: 362 VYKEACL 382
           + KEACL
Sbjct: 397 LCKEACL 403


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/128 (33%), Positives = 62/128 (48%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSELRX 181
           RPWQ DR+V++DGF NR+ F   G  T LV +TP +VY+DQ+ LKQ              
Sbjct: 312 RPWQSDRKVMHDGFTNRHSFEFKGGKTILVSMTPHEVYQDQIHLKQ-------------- 357

Query: 182 XXXXXXXXXXXXXXXXXXXITTKKEQNVSDERKTKKNMSFYARESDIKRAFHASRPMIVL 361
                                 KKEQ V       K  +F+A+  ++K A+ + +PM++ 
Sbjct: 358 ----------------------KKEQVV-------KQPNFFAKSGEVKSAYSSKQPMLLF 388

Query: 362 VYKEACLS 385
           V+KEA  S
Sbjct: 389 VFKEALTS 396


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/127 (31%), Positives = 63/127 (49%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSELRX 181
           RPWQ+DR+  +DG+ N+Y F  H +   LVPL P +V EDQ  + ++YD+   EK + + 
Sbjct: 455 RPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEVREDQRKMSEKYDQERKEKEKEK- 513

Query: 182 XXXXXXXXXXXXXXXXXXXITTKKEQNVSDERKTKKNMSFYARESDIKRAFHASRPMIVL 361
                                 K E+  +D+R  +K  S  A+  D+K A  + +P+ +L
Sbjct: 514 ---------------------EKNEKKKNDKR--EKKQSLIAKIRDVKEAIVSHQPLYLL 550

Query: 362 VYKEACL 382
             KE  L
Sbjct: 551 FCKEVPL 557


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESE-KSELR 178
           RPWQYDR   + G KNRY    +GK  TL PL+P QV+EDQ  L++   + + E KSEL 
Sbjct: 512 RPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELE 571

Query: 179 XXXXXXXXXXXXXXXXXXXX---ITTKKEQNVSD---------ERKTKKNMSFYARESDI 322
                                  ++ + ++ VS          E K KKN S Y +  + 
Sbjct: 572 GKEKGQEIEKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKEC 631

Query: 323 KRAFHASRPMIVLVYKEACLS 385
             A     P+I+L YKE  ++
Sbjct: 632 LNARREGLPIILLTYKEILIN 652


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESE-KSELR 178
           RPWQYDR   + G KNRY    +GK  TL PL+P QV+EDQ  L++   + + E KSEL 
Sbjct: 512 RPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELE 571

Query: 179 XXXXXXXXXXXXXXXXXXXX---ITTKKEQNVSD---------ERKTKKNMSFYARESDI 322
                                  ++ + ++ VS          E K KKN S Y +  + 
Sbjct: 572 GKEKGQEIEKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKEC 631

Query: 323 KRAFHASRPMIVLVYKEACLS 385
             A     P+I+L YKE  ++
Sbjct: 632 LNARREGLPIILLTYKEILIN 652


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYED 121
           RPWQ+DR+V +DGFKNRY F    K  TLVPLTPRQ YED
Sbjct: 483 RPWQFDRKVNHDGFKNRYSFXKDNKTITLVPLTPRQEYED 522


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSE 172
           RPWQ+DR+  +DG+ N+Y F  H +   LVPL P +V EDQ  ++++YD+   EK +
Sbjct: 455 RPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEVREDQRKMREKYDQERKEKEK 511


>emb|CAN67751.1| hypothetical protein VITISV_030106 [Vitis vinifera]
          Length = 376

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCL 133
           RPWQ+DR V +DGF N+YLF ++ + TTLV L+ +QVYEDQ+ L
Sbjct: 46  RPWQFDRHVKHDGFTNKYLFVLNQRTTTLVHLSSKQVYEDQVDL 89


>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
           gi|7267450|emb|CAB81146.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 1054

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQ 139
           RPWQ DR+V+ DGF NR  F  +G+ TTL+P+T  +VY DQ+ +KQ
Sbjct: 449 RPWQSDRKVLQDGFTNRQTFEHNGRKTTLIPMTLHEVYLDQLSMKQ 494


>emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera]
          Length = 537

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/60 (43%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYD-RIESEKSELR 178
           RPW++DR + ++GF N+Y F ++ +   LV L+P+QVYEDQ+ L++E D + +SEK + +
Sbjct: 258 RPWKFDRHIKHNGFTNKYSFMLNQRTIILVHLSPKQVYEDQIRLQEESDIKKKSEKKKTK 317


>emb|CAN65853.1| hypothetical protein VITISV_004966 [Vitis vinifera]
          Length = 556

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQM 127
           RPWQ+DR V +D F N+Y F ++    TLVPL+P+QVYEDQ+
Sbjct: 320 RPWQFDRHVKHDDFTNKYSFVLNQMTITLVPLSPKQVYEDQV 361


>ref|XP_006389056.1| hypothetical protein POPTR_0052s00200g [Populus trichocarpa]
           gi|550311673|gb|ERP47970.1| hypothetical protein
           POPTR_0052s00200g [Populus trichocarpa]
          Length = 340

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 39/52 (75%)
 Frame = +2

Query: 14  YDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKS 169
           +D++V++DGF+NR+     GK  TLVPL+P+Q Y+DQM LK++ +  +SE S
Sbjct: 275 FDQKVIHDGFRNRFTIVKDGKIITLVPLSPKQEYDDQMKLKRDCEDGKSETS 326


>ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594621 [Solanum tuberosum]
          Length = 631

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +2

Query: 2   RPWQYDRRVVYDGFKNRYLFTMHGKPTTLVPLTPRQVYEDQMCLKQEYDRIESEKSE 172
           RPWQ+ R +++ G  N+Y F + GK   L PLTP QV ED   +K+  +R+++E+++
Sbjct: 536 RPWQFGRDIMHQGRSNKYTFVIEGKKYVLAPLTPYQVSEDYRAMKELRERVKTEEAK 592