BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00011112
         (793 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96942.1| hypothetical protein [Cleome spinosa]                   55   2e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    55   6e-07
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    50   2e-06
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    52   3e-06
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    53   5e-06
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    53   8e-06

>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
          Length = 402

 Score = 55.5 bits (132), Expect(2) = 2e-07
 Identities = 30/77 (38%), Positives = 39/77 (50%)
 Frame = -2

Query: 657 LRCKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFWDCLP*E 478
           L C+P EEGG G+ R++D S    LK IW +  E  +LWV W+ E+  K   FW  L  +
Sbjct: 206 LVCQPKEEGGLGIRRLEDFSSIFRLKSIWMIFKESGSLWVAWLKENVFKKRGFWGALRSQ 265

Query: 477 FFLLDLEKNPQLKSHCR 427
                L K    K H R
Sbjct: 266 RQSCHLRKLLGYKDHAR 282



 Score = 26.9 bits (58), Expect(2) = 2e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 409 LIGKGDTVKFWLDPWSPMWYW*ESLGKTG 323
           ++G G T  FW D W+ M    E +G  G
Sbjct: 288 VLGNGKTTTFWHDDWTGMGPLIERIGAAG 316


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 55.5 bits (132), Expect(2) = 6e-07
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = -2

Query: 651  CKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFWD 493
            CKP +EGG GL  +K+ +    LKL+W + +   +LWV W+ +H  ++  FW+
Sbjct: 866  CKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWE 918



 Score = 25.0 bits (53), Expect(2) = 6e-07
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 406  IGKGDTVKFWLDPWSPMWYW*ESLGKTG 323
            +G G    FW D WS +    E  G  G
Sbjct: 948  VGNGKQTSFWYDNWSDLGQLLERTGDRG 975


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -2

Query: 651 CKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFW 496
           CKP +EGG GL  +K+ +    LK++W + +   +LWV WI +   K+  FW
Sbjct: 823 CKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFW 874



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 406 IGKGDTVKFWLDPWSPMWYW*ESLGKTG 323
           + KG+   FW D WS M    E +G  G
Sbjct: 905 VNKGNCTSFWYDDWSNMGQMVEKVGDRG 932


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = -2

Query: 651 CKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFW 496
           C+P  EGG GL  IK+ +    LKLIW + ++  +LWV WI  +  K   FW
Sbjct: 384 CRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFW 435



 Score = 26.6 bits (57), Expect(2) = 3e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 406 IGKGDTVKFWLDPWSPMWYW*ESLGKTGE 320
           I  G+T  FW D WS      + LG+ G+
Sbjct: 465 IRNGETASFWYDDWSSKGRLIDVLGERGQ 493


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 52.8 bits (125), Expect(2) = 5e-06
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = -2

Query: 651 CKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFW 496
           CKP EEGG GL  +K+ +    LKLIW + +   +LWV WI     K   FW
Sbjct: 196 CKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFW 247



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 406 IGKGDTVKFWLDPWSPMWYW*ESLGKTG 323
           I  G    FW D WS +    ES G  G
Sbjct: 278 INNGAQTSFWYDDWSDLGRLIESAGDRG 305


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = -2

Query: 651 CKPMEEGGRGLGRIKDVSRAATLKLIWWLATEKVNLWVNWIHEHY*KSYCFW 496
           CKP EEGG GL  +K+ +    LKLIW + +   +LWV WI     K   FW
Sbjct: 115 CKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFW 166



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 406 IGKGDTVKFWLDPWSPMWYW*ESLGKTG 323
           I  G    FW D WS +    +S G  G
Sbjct: 197 INNGARTSFWYDDWSDLGRLIDSAGDRG 224