BLASTX nr result
ID: Cocculus22_contig00011071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00011071
(534 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [A... 87 3e-15
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor... 85 1e-14
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 84 2e-14
ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theob... 84 2e-14
gb|EMT00349.1| Putative pre-mRNA-splicing factor ATP-dependent R... 84 3e-14
gb|EMS57677.1| Putative pre-mRNA-splicing factor ATP-dependent R... 84 3e-14
gb|AFW61762.1| putative RNA helicase family protein [Zea mays] 83 4e-14
ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [S... 83 4e-14
ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [S... 83 4e-14
ref|NP_001169964.1| uncharacterized protein LOC100383864 [Zea ma... 83 4e-14
gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus... 82 6e-14
gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent R... 82 8e-14
ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor... 82 8e-14
ref|XP_007208575.1| hypothetical protein PRUPE_ppa023487mg [Prun... 81 1e-13
dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japonica Group] 81 1e-13
dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare] 81 1e-13
gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indi... 81 1e-13
ref|XP_007210909.1| hypothetical protein PRUPE_ppa000714mg [Prun... 81 2e-13
ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor... 80 2e-13
ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor... 80 2e-13
>ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [Amborella trichopoda]
gi|548839655|gb|ERM99915.1| hypothetical protein
AMTR_s00110p00073830 [Amborella trichopoda]
Length = 1044
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAMD 403
YMRQV ELKPEWLV+IAPHYYQ+KDVE+SGS+KMPRGQGRA MD
Sbjct: 1001 YMRQVIELKPEWLVEIAPHYYQLKDVEDSGSRKMPRGQGRATMD 1044
>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Brachypodium distachyon]
Length = 1051
Score = 84.7 bits (208), Expect = 1e-14
Identities = 36/43 (83%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKPEWLV+IAPHYYQ+KDV++SGSKK+P+GQGRAA+
Sbjct: 1009 YMRQVTELKPEWLVEIAPHYYQLKDVDDSGSKKLPKGQGRAAL 1051
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAA 409
YMRQVTELKP+WLV+IAPHYYQMKDVE+ GSKKMPRGQGRA+
Sbjct: 1010 YMRQVTELKPDWLVEIAPHYYQMKDVEDPGSKKMPRGQGRAS 1051
>ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|508774751|gb|EOY22007.1| RNA helicase family protein
isoform 1 [Theobroma cacao]
Length = 1054
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAA 409
YMRQVTELKP+WLV+IAPHYYQMKDVE+ GSKKMP+GQGRAA
Sbjct: 1012 YMRQVTELKPDWLVEIAPHYYQMKDVEDPGSKKMPKGQGRAA 1053
>gb|EMT00349.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Aegilops tauschii]
Length = 1041
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKPEWLV+IAPHYYQ+KDV+++GSKK+P+GQGRAA+
Sbjct: 999 YMRQVTELKPEWLVEIAPHYYQLKDVDDAGSKKLPKGQGRAAL 1041
>gb|EMS57677.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Triticum urartu]
Length = 954
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKPEWLV+IAPHYYQ+KDV+++GSKK+P+GQGRAA+
Sbjct: 912 YMRQVTELKPEWLVEIAPHYYQLKDVDDAGSKKLPKGQGRAAL 954
>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
Length = 639
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
+MRQVTELKPEWLV+IAPHYYQ+KDVE+SG+KK+P+GQGRAA+
Sbjct: 597 FMRQVTELKPEWLVEIAPHYYQLKDVEDSGTKKLPKGQGRAAL 639
>ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [Sorghum bicolor]
gi|241933802|gb|EES06947.1| hypothetical protein
SORBIDRAFT_04g022460 [Sorghum bicolor]
Length = 1088
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
+MRQVTELKPEWLV+IAPHYYQ+KDVE+SG+KK+P+GQGRAA+
Sbjct: 1046 FMRQVTELKPEWLVEIAPHYYQLKDVEDSGTKKLPKGQGRAAL 1088
>ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [Sorghum bicolor]
gi|241929596|gb|EES02741.1| hypothetical protein
SORBIDRAFT_03g010540 [Sorghum bicolor]
Length = 1046
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
+MRQVTELKPEWLV+IAPHYYQ+KDVE+SG+KK+P+GQGRAA+
Sbjct: 1004 FMRQVTELKPEWLVEIAPHYYQLKDVEDSGTKKLPKGQGRAAL 1046
>ref|NP_001169964.1| uncharacterized protein LOC100383864 [Zea mays]
gi|224032607|gb|ACN35379.1| unknown [Zea mays]
Length = 335
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/43 (81%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
+MRQVTELKPEWLV+IAPHYYQ+KDVE+SG+KK+P+GQGRAA+
Sbjct: 293 FMRQVTELKPEWLVEIAPHYYQLKDVEDSGTKKLPKGQGRAAL 335
>gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus guttatus]
Length = 1035
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAMD 403
YMRQVTELKPEWLV++APHYYQ+KDVE+ SKKMPRGQGRA D
Sbjct: 992 YMRQVTELKPEWLVELAPHYYQLKDVEDLASKKMPRGQGRATKD 1035
>gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Morus notabilis]
Length = 1043
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/42 (85%), Positives = 41/42 (97%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAA 409
YMRQVTELKPEWLV+IAPHYYQ+KDVE+S SKKMPRG+GRA+
Sbjct: 1002 YMRQVTELKPEWLVEIAPHYYQLKDVEDSTSKKMPRGEGRAS 1043
>ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Setaria italica]
Length = 1051
Score = 82.0 bits (201), Expect = 8e-14
Identities = 34/43 (79%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
+MRQVTELKPEWLV+IAPHYYQ+KDV++SG+KK+P+GQGRAA+
Sbjct: 1009 FMRQVTELKPEWLVEIAPHYYQLKDVDDSGTKKLPKGQGRAAL 1051
>ref|XP_007208575.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
gi|462404217|gb|EMJ09774.1| hypothetical protein
PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAMD 403
YMRQVTELKPEWLV+IAPHYYQ+KDVE+S SKKMPRG+GR D
Sbjct: 1009 YMRQVTELKPEWLVEIAPHYYQLKDVEDSMSKKMPRGEGRPQQD 1052
>dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japonica Group]
Length = 1066
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/43 (76%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKP+WLV+IAPHYYQ+KDV+++G+KK+P+GQGRAA+
Sbjct: 1024 YMRQVTELKPDWLVEIAPHYYQLKDVDDTGTKKLPKGQGRAAL 1066
>dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1046
Score = 81.3 bits (199), Expect = 1e-13
Identities = 34/43 (79%), Positives = 42/43 (97%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKPEWLV+IAPHYYQ+KDV+++ SKK+P+GQGRAA+
Sbjct: 1004 YMRQVTELKPEWLVEIAPHYYQLKDVDDAASKKLPKGQGRAAL 1046
>gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indica Group]
gi|222640378|gb|EEE68510.1| hypothetical protein
OsJ_26936 [Oryza sativa Japonica Group]
Length = 1046
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/43 (76%), Positives = 43/43 (100%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAM 406
YMRQVTELKP+WLV+IAPHYYQ+KDV+++G+KK+P+GQGRAA+
Sbjct: 1004 YMRQVTELKPDWLVEIAPHYYQLKDVDDTGTKKLPKGQGRAAL 1046
>ref|XP_007210909.1| hypothetical protein PRUPE_ppa000714mg [Prunus persica]
gi|462406644|gb|EMJ12108.1| hypothetical protein
PRUPE_ppa000714mg [Prunus persica]
Length = 1026
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAAMD 403
YMRQVTELKPEWLV+IAPHYYQ+KDVE+ SKKMPRG+GRA D
Sbjct: 983 YMRQVTELKPEWLVEIAPHYYQLKDVEDLMSKKMPRGEGRAQQD 1026
>ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X2 [Solanum tuberosum]
Length = 909
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAA 409
YMRQVTELKP+WLV+IAPHYYQ+KDVE+S SKKMPRG GRA+
Sbjct: 868 YMRQVTELKPDWLVEIAPHYYQLKDVEDSSSKKMPRGTGRAS 909
>ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X1 [Solanum tuberosum]
Length = 1050
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = -1
Query: 534 YMRQVTELKPEWLVDIAPHYYQMKDVEESGSKKMPRGQGRAA 409
YMRQVTELKP+WLV+IAPHYYQ+KDVE+S SKKMPRG GRA+
Sbjct: 1009 YMRQVTELKPDWLVEIAPHYYQLKDVEDSSSKKMPRGTGRAS 1050