BLASTX nr result

ID: Cocculus22_contig00011005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00011005
         (319 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31099.3| unnamed protein product [Vitis vinifera]               86   7e-15
ref|XP_003593818.1| Fasciclin-like arabinogalactan protein [Medi...    54   7e-09
ref|XP_007019667.1| NADH dehydrogenase subunit 7, putative [Theo...    43   2e-06
ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...    45   4e-06

>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = +1

Query: 202 GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFE 318
           GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFE
Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFE 305


>ref|XP_003593818.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355482866|gb|AES64069.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 357

 Score = 54.3 bits (129), Expect(2) = 7e-09
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +3

Query: 156 SIDRKPYDGK-LSR*VWREMGPVI**-GEQMQAFSFNSRPNDYRIIGLLYLNSPF 314
           SIDRK YDGK ++  + R+    I   GEQMQAF+FNS  NDYRII LLYLNS F
Sbjct: 301 SIDRKLYDGKTITLGLKRDQTYYINQHGEQMQAFNFNSGQNDYRIISLLYLNSSF 355



 Score = 31.2 bits (69), Expect(2) = 7e-09
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 31  IARRCNSAEALCAIMLSQGRSAFSIE 108
           + + C+  EALCAI LSQG S  SI+
Sbjct: 278 LVKLCSIVEALCAITLSQGCSTLSID 303


>ref|XP_007019667.1| NADH dehydrogenase subunit 7, putative [Theobroma cacao]
           gi|508724995|gb|EOY16892.1| NADH dehydrogenase subunit
           7, putative [Theobroma cacao]
          Length = 128

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = +1

Query: 232 GSRCKLFLSIAGQMTTGSSVYSTSIHHFE 318
           G      LSIA QMT GSS+YSTSIHHFE
Sbjct: 15  GVDASFILSIASQMTIGSSIYSTSIHHFE 43



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 194 LGLERDGTGYIIGGADASF 250
           LGLE+D T YIIGG DASF
Sbjct: 2   LGLEKDETSYIIGGVDASF 20


>ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Cucumis sativus]
           gi|449471067|ref|XP_004153199.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449471614|ref|XP_004153361.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449472439|ref|XP_004153594.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449472462|ref|XP_004153601.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449532418|ref|XP_004173178.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus]
          Length = 137

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 23/44 (52%), Positives = 23/44 (52%)
 Frame = +3

Query: 63  MCYNAEPXXXXXXXXXXXXXXXXXXXXVMAQSIDRKPYDGKLSR 194
           MCYNAEP                    VMAQSIDRKPYDGKL R
Sbjct: 1   MCYNAEPRTLRLIYISSQLSSSRISSLVMAQSIDRKPYDGKLPR 44



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 265 GQMTTGSSVYSTSIHHFE 318
           G++   SSVYSTSIHHFE
Sbjct: 40  GKLPRSSSVYSTSIHHFE 57


Top