BLASTX nr result
ID: Cocculus22_contig00010956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00010956 (525 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006338615.1| PREDICTED: F-box/LRR-repeat protein 4-like [... 57 2e-06 ref|XP_004232328.1| PREDICTED: F-box/LRR-repeat protein 7-like [... 57 2e-06 ref|XP_004304644.1| PREDICTED: F-box/LRR-repeat protein 7-like i... 56 5e-06 ref|XP_004304643.1| PREDICTED: F-box/LRR-repeat protein 7-like i... 56 5e-06 ref|XP_007140945.1| hypothetical protein PHAVU_008G154600g [Phas... 56 6e-06 >ref|XP_006338615.1| PREDICTED: F-box/LRR-repeat protein 4-like [Solanum tuberosum] Length = 460 Score = 57.4 bits (137), Expect = 2e-06 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +1 Query: 181 MDSVLCDELLQEIFQRXXXXXXXXXXXVCKRWLHLHRSSKSSISLRL 321 MDS+LCDELLQEIF+R VCKRWLHL RSS +S+S+ L Sbjct: 3 MDSILCDELLQEIFRRLPPPSAAAVSLVCKRWLHLLRSSTTSLSVCL 49 >ref|XP_004232328.1| PREDICTED: F-box/LRR-repeat protein 7-like [Solanum lycopersicum] Length = 458 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +1 Query: 181 MDSVLCDELLQEIFQRXXXXXXXXXXXVCKRWLHLHRSSKSSISL 315 MDS+LCDELLQEIF+R VCKRWLHL RSS +S+S+ Sbjct: 1 MDSILCDELLQEIFRRLPPPSAASVSLVCKRWLHLLRSSTTSLSI 45 >ref|XP_004304644.1| PREDICTED: F-box/LRR-repeat protein 7-like isoform 2 [Fragaria vesca subsp. vesca] Length = 441 Score = 56.2 bits (134), Expect = 5e-06 Identities = 25/47 (53%), Positives = 34/47 (72%) Frame = +1 Query: 181 MDSVLCDELLQEIFQRXXXXXXXXXXXVCKRWLHLHRSSKSSISLRL 321 MD++LCDEL+QE+F R V KRWLHLHR+S++S++LRL Sbjct: 1 MDNLLCDELVQEVFLRLPPSSSSSVSLVSKRWLHLHRTSRTSLTLRL 47 >ref|XP_004304643.1| PREDICTED: F-box/LRR-repeat protein 7-like isoform 1 [Fragaria vesca subsp. vesca] Length = 468 Score = 56.2 bits (134), Expect = 5e-06 Identities = 25/47 (53%), Positives = 34/47 (72%) Frame = +1 Query: 181 MDSVLCDELLQEIFQRXXXXXXXXXXXVCKRWLHLHRSSKSSISLRL 321 MD++LCDEL+QE+F R V KRWLHLHR+S++S++LRL Sbjct: 1 MDNLLCDELVQEVFLRLPPSSSSSVSLVSKRWLHLHRTSRTSLTLRL 47 >ref|XP_007140945.1| hypothetical protein PHAVU_008G154600g [Phaseolus vulgaris] gi|561014078|gb|ESW12939.1| hypothetical protein PHAVU_008G154600g [Phaseolus vulgaris] Length = 461 Score = 55.8 bits (133), Expect = 6e-06 Identities = 28/50 (56%), Positives = 33/50 (66%) Frame = +1 Query: 181 MDSVLCDELLQEIFQRXXXXXXXXXXXVCKRWLHLHRSSKSSISLRLPFH 330 M+ L DELLQEIFQ+ VCKRWLHL+RSS +S+SLRL H Sbjct: 1 MEKSLYDELLQEIFQKLPPSSSSSVALVCKRWLHLYRSSTTSLSLRLTPH 50