BLASTX nr result
ID: Cocculus22_contig00010405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010405
(568 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ... 58 2e-16
ref|XP_003605618.1| Photosystem II reaction center protein M [Me... 52 1e-11
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ... 75 2e-11
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ... 75 2e-11
ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitun... 65 2e-08
ref|NP_817169.1| ORF64a [Pinus koraiensis] gi|29469690|gb|AAO740... 57 3e-06
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac... 57 4e-06
gb|AFK48586.1| unknown [Medicago truncatula] 56 6e-06
ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arab... 55 1e-05
ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arab... 55 1e-05
>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
gi|355518112|gb|AES99735.1| hypothetical protein
MTR_5g084150 [Medicago truncatula]
Length = 187
Score = 57.8 bits (138), Expect(2) = 2e-16
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 229 YPTPRGSRIPVASLKERCPKPLDDG 155
YPTPRGSRIPVASLKERCPKPLDDG
Sbjct: 39 YPTPRGSRIPVASLKERCPKPLDDG 63
Score = 53.9 bits (128), Expect(2) = 2e-16
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -2
Query: 423 FLEDKLVIEYHDGSANFWAEPDLNQRRHIANEFT 322
F K VI H GS NFWAE DLNQRRHIANEFT
Sbjct: 5 FKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT 38
>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
gi|355506673|gb|AES87815.1| Photosystem II reaction
center protein M [Medicago truncatula]
Length = 164
Score = 52.4 bits (124), Expect(2) = 1e-11
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 150 MPPSSSGLGHLSFKEATGIRLPLG 221
MPPSSSGLGHLSFKEATGIRLPLG
Sbjct: 47 MPPSSSGLGHLSFKEATGIRLPLG 70
Score = 43.1 bits (100), Expect(2) = 1e-11
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1
Query: 307 LMGTDCKFVGNMSTLVQIRLGPKIR 381
LMGTDCKFVGNMSTLVQI+L +R
Sbjct: 72 LMGTDCKFVGNMSTLVQIQLVQLVR 96
>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
gi|355507095|gb|AES88237.1| hypothetical protein
MTR_4g051190 [Medicago truncatula]
Length = 96
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/103 (45%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = -1
Query: 448 FIPLYQS---FVSRGQIGYRISRWIGEFLGRAGFEPA*TYCQRIYSPSPLTTRASTQEES 278
FI LY S Q+GY I+ WI +FLGRAGFEP
Sbjct: 23 FILLYGSPLVIFREHQMGYIIAWWISKFLGRAGFEP------------------------ 58
Query: 277 IFG*LIIHKQLPLLC*YPTPRGSRIPVASLKERCPKPLDDGGI 149
YPTPRGSRIPVASLKERCPKPLDDGGI
Sbjct: 59 ----------------YPTPRGSRIPVASLKERCPKPLDDGGI 85
>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
gi|355506697|gb|AES87839.1| hypothetical protein
MTR_4g035260 [Medicago truncatula]
Length = 142
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/103 (45%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = -1
Query: 448 FIPLYQS---FVSRGQIGYRISRWIGEFLGRAGFEPA*TYCQRIYSPSPLTTRASTQEES 278
FI LY S Q+GY I+ WI +FLGRAGFEP
Sbjct: 69 FILLYGSPLVIFREHQMGYIIAWWISKFLGRAGFEP------------------------ 104
Query: 277 IFG*LIIHKQLPLLC*YPTPRGSRIPVASLKERCPKPLDDGGI 149
YPTPRGSRIPVASLKERCPKPLDDGGI
Sbjct: 105 ----------------YPTPRGSRIPVASLKERCPKPLDDGGI 131
>ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitungensis]
gi|452848985|ref|YP_007474664.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
gi|149941505|dbj|BAF64929.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|372863140|gb|AEX99213.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 62
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +3
Query: 132 MTVGQGMPPSSSGLGHLSFKEATGIRLPLGVGY*QSKGSCLCIINQPKMDSSWVDARVVN 311
MT+G+ P SSSG GHLSFKEA GIRLPLGV + + + + SWVDARVVN
Sbjct: 1 MTIGR--PLSSSGPGHLSFKEAAGIRLPLGVLWESFSRNTYLVFQTLSIHCSWVDARVVN 58
Query: 312 GDGL 323
DGL
Sbjct: 59 EDGL 62
>ref|NP_817169.1| ORF64a [Pinus koraiensis] gi|29469690|gb|AAO74018.1| ORF64a [Pinus
koraiensis]
Length = 64
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 250 VYVLSISQKWILPGSMPEWLMGTDCKFVGNMSTLVQIRLGP 372
++ L +I+PGSMPEWLM TDCK VGNM TLVQI+L P
Sbjct: 7 IFNLKTFNYFIVPGSMPEWLMRTDCKSVGNMPTLVQIQLDP 47
>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
gi|7636100|emb|CAB88720.1| hypothetical protein
[Spinacia oleracea]
Length = 83
Score = 56.6 bits (135), Expect = 4e-06
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 295 MPEWLMGTDCKFVGNMSTLVQIRLGPKIRRSIV 393
MPE LMGTDCKFVGNMSTLVQI+LGP I SI+
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPIISSSII 33
>gb|AFK48586.1| unknown [Medicago truncatula]
Length = 29
Score = 56.2 bits (134), Expect = 6e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 295 MPEWLMGTDCKFVGNMSTLVQIRLGPKI 378
MPE LMGTDCKFVGNMSTLVQI+LGPKI
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPKI 28
>ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
lyrata] gi|297334207|gb|EFH64625.1| hypothetical protein
ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]
Length = 57
Score = 55.5 bits (132), Expect = 1e-05
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 145 RVCPHRLVV*DISLSRRQRGFDFPWG 222
+VCPHRLVV DISLSRRQRGFDFPWG
Sbjct: 32 QVCPHRLVVQDISLSRRQRGFDFPWG 57
>ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp.
lyrata] gi|297332703|gb|EFH63121.1| hypothetical protein
ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]
Length = 63
Score = 55.5 bits (132), Expect = 1e-05
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 145 RVCPHRLVV*DISLSRRQRGFDFPWG 222
+VCPHRLVV DISLSRRQRGFDFPWG
Sbjct: 38 QVCPHRLVVQDISLSRRQRGFDFPWG 63