BLASTX nr result
ID: Cocculus22_contig00010361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010361
(1208 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [... 539 e-150
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 526 e-147
ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) ... 523 e-146
ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ... 521 e-145
ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ... 520 e-145
ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ... 520 e-145
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 519 e-145
ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnoli... 518 e-144
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop... 516 e-144
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 514 e-143
ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) ... 514 e-143
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 510 e-142
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 510 e-142
ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ... 509 e-142
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 509 e-142
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34... 509 e-142
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 509 e-141
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 508 e-141
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 508 e-141
ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) ... 506 e-140
>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 1895
Score = 539 bits (1388), Expect = e-150
Identities = 288/406 (70%), Positives = 318/406 (78%), Gaps = 17/406 (4%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FENAVRNE+SQYFFYTCQSDGKQ+ISFTYPPSLSTF EMIQRKMFLYT
Sbjct: 375 WNRPLRYIKNDRFENAVRNELSQYFFYTCQSDGKQKISFTYPPSLSTFWEMIQRKMFLYT 434
Query: 1028 TEKLSSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQNC 849
TEKLSSEELYNHWV TNEQKKNNL+NEF+NRIEALDKG L LDVLEKRTRLC+DETEQ C
Sbjct: 435 TEKLSSEELYNHWVYTNEQKKNNLNNEFINRIEALDKGSLALDVLEKRTRLCNDETEQEC 494
Query: 848 LPKIYDPFLNGSYRGTIKELYSRSSMNDDFI-TSIETIWRNKFHDIFTADYREFE----- 687
LPKI+DPF NG YRGTIK+ YS S MN I SIE +W NK HDI DYREFE
Sbjct: 495 LPKIHDPFWNGPYRGTIKKKYSHSIMNKTSIEDSIEMVWINKIHDILLTDYREFEHKIYT 554
Query: 686 ------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENK---AKYFFAAVT 540
T+I + LTSINEF GES+P NLK+ SL +EQG+ + SENK K+ F AV
Sbjct: 555 FDEKYLSTDIGHFLTSINEFTGESTPSFNLKELSLSAEQGRIY-SENKEKFLKFLFDAVI 613
Query: 539 TDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAKRVVI 360
TD NDQ RKKSIG+KEISKKVPRW+YKL +DL+ ED IRSRKAKRVVI
Sbjct: 614 TDPNDQRIRKKSIGIKEISKKVPRWSYKLINDLEQQEGGIEEEVAEDHEIRSRKAKRVVI 673
Query: 359 FTDNEQNANTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRKTVTWELFQ 180
FTDNEQN T+T +TSN N A E+ALIRYSQQ+DFRRD+IKGSMR QRRK V WELFQ
Sbjct: 674 FTDNEQNTETHT-NTSTSNDNQANEMALIRYSQQADFRRDIIKGSMRAQRRKIVIWELFQ 732
Query: 179 SNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
+NVHSPLFLDRID KTF F+FDI GM+ IFRN GK +E K SDS
Sbjct: 733 ANVHSPLFLDRID-KTFFFSFDIFGMMKPIFRNWMGKNMELKISDS 777
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides]
gi|290489080|gb|ADD30924.1| putative RF1 protein
[Trochodendron aralioides] gi|479279354|gb|AGJ72207.1|
hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides]
Length = 1896
Score = 526 bits (1354), Expect = e-147
Identities = 286/408 (70%), Positives = 316/408 (77%), Gaps = 19/408 (4%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FENAVRNE+SQYFF TCQSDGKQRISFTYPPSLSTF EMIQRKM L T
Sbjct: 375 WNRPLRYIKNDRFENAVRNELSQYFFDTCQSDGKQRISFTYPPSLSTFWEMIQRKMSLCT 434
Query: 1028 TEKLSSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLC--DDETEQ 855
TEKLSSEELYNHWV TNEQKKNNL+NEF+NRIEALDKG L LDVLEKRTRLC +DETEQ
Sbjct: 435 TEKLSSEELYNHWVYTNEQKKNNLNNEFINRIEALDKGSLALDVLEKRTRLCNGNDETEQ 494
Query: 854 NCLPKIYDPFLNGSYRGTIKELYSRSSMNDDFI-TSIETIWRNKFHDIFTADYREFE--- 687
CLPK+YDPF NG YRGTIK+ YS S MN+ I SIE +W NK HDI DYREFE
Sbjct: 495 ECLPKMYDPFWNGPYRGTIKKWYSHSIMNETSIEDSIEIVWINKIHDILLTDYREFEQKI 554
Query: 686 --------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENK---AKYFFAA 546
T+I + LTS NEF GES+P NLK+ SL +EQG+ +SEN+ K+ F A
Sbjct: 555 YGFDGKSLSTDIGHFLTSTNEFTGESTPSFNLKELSLSAEQGR-IESENQEKFLKFLFDA 613
Query: 545 VTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAKRV 366
V TD NDQ RKKSIG+KEISKKVPRW+YKL +DL+ ED IRSRKAKRV
Sbjct: 614 VRTDPNDQRIRKKSIGIKEISKKVPRWSYKLINDLEQQEGGSEEEVAEDHEIRSRKAKRV 673
Query: 365 VIFTDNEQNANTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRKTVTWEL 186
VIFTDNEQN T+T +TSN N A EVALIRYSQQ+DFRRD+IKGSMRTQRRK V WEL
Sbjct: 674 VIFTDNEQNTETHT-NTSTSNDNQANEVALIRYSQQADFRRDIIKGSMRTQRRKIVIWEL 732
Query: 185 FQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
FQ+NVHSPLFLDRID KTF F+FDI GM+ IFRN GK +E K SDS
Sbjct: 733 FQANVHSPLFLDRID-KTFFFSFDIFGMMKPIFRNWMGKNMELKISDS 779
>ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sinica]
Length = 1841
Score = 523 bits (1347), Expect = e-146
Identities = 283/413 (68%), Positives = 318/413 (76%), Gaps = 24/413 (5%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 337 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 396
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG LTLDVLEKRTRLC++E EQ
Sbjct: 397 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTLTLDVLEKRTRLCNNENEQE 456
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFI---TSIETIWRNKFHDIFTADYREFE-- 687
CLPKIYDPFLNGSYRGT K++YSRS MND SIE +W NK H IF DYREFE
Sbjct: 457 CLPKIYDPFLNGSYRGTTKKVYSRSIMNDSITWTEDSIEKVWINKIHGIFPNDYREFEQK 516
Query: 686 ---------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFFA 549
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 517 MDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLSD 575
Query: 548 AVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAKR 369
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAKR
Sbjct: 576 VVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDHGIRSRKAKR 635
Query: 368 VVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRKT 201
VVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRKT
Sbjct: 636 VVIYTDNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSMRAQRRKT 695
Query: 200 VTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
VTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN G+G E KTSDS
Sbjct: 696 VTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGRGPELKTSDS 747
>ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata]
Length = 1846
Score = 521 bits (1342), Expect = e-145
Identities = 285/414 (68%), Positives = 320/414 (77%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGTIK++YSRS M D IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTIKKVYSRSIM-DGSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KIDLFNGESLSTDIGHFLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDRLEEQEEGNEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 638 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRDLIKGSMRAQRRK 697
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 698 TVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPELKTSDS 750
>ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri]
Length = 1846
Score = 520 bits (1338), Expect = e-145
Identities = 285/414 (68%), Positives = 319/414 (77%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG +TLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTVTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 638 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSMRAQRRK 697
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 698 TVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPELKTSDS 750
>ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii]
Length = 1837
Score = 520 bits (1338), Expect = e-145
Identities = 285/414 (68%), Positives = 319/414 (77%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRK+ L T
Sbjct: 331 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKVSLRT 390
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG LTLDVLEKRTRLC+ E EQ
Sbjct: 391 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTLTLDVLEKRTRLCNHENEQE 450
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFL GSYRGT K++YSRS M DD IT SIE +W NK H IF+ DYREFE
Sbjct: 451 CLPKIYDPFLKGSYRGTTKKVYSRSIM-DDSITWTEDSIEKVWINKIHGIFSNDYREFEQ 509
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK SL EQ + DSEN+ K+
Sbjct: 510 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFSLLVEQRR-LDSENQTKCLKFLS 568
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 569 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDRLEGQEEENEEESTEDHGIRSRKAK 628
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 629 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSMRAQRRK 688
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 689 TVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPELKTSDS 741
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast RF19
[Magnolia kwangsiensis]
Length = 1838
Score = 519 bits (1337), Expect = e-145
Identities = 285/414 (68%), Positives = 321/414 (77%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 337 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 396
Query: 1028 TEKLSS-EELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
EKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 397 REKLLSLEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 456
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K++YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 457 CLPKIYDPFLNGSYRGTTKKVYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 515
Query: 686 ---LTNIDNL-------LTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
L N+++L LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 516 KMDLFNVESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 574
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 575 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDHGIRSRKAK 634
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 635 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRDLIKGSMRAQRRK 694
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 695 TVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPELKTSDS 747
>ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnolia tripetala]
gi|608608461|gb|AHW52015.1| photosystem I assembly
protein Ycf1 [Magnolia tripetala]
Length = 1846
Score = 518 bits (1333), Expect = e-144
Identities = 284/414 (68%), Positives = 318/414 (76%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITRTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDFFNGESLSADIGHSLTSISELAGESTPSLNLKGFALLVEQTR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEAENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 638 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRDLIKGSMRAQRRK 697
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 698 TVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGSELKTSDS 750
>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora]
Length = 1843
Score = 516 bits (1330), Expect = e-144
Identities = 283/414 (68%), Positives = 318/414 (76%), Gaps = 25/414 (6%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQTR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
+TTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVLTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEAENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRK 204
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRDLIKGSMR QRRK
Sbjct: 638 RVVIYTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRDLIKGSMRAQRRK 697
Query: 203 TVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
TVTWE+FQ+NVHSPLFLDRIDK F F+FDISGM+N IFRN GKG E KTSDS
Sbjct: 698 TVTWEMFQANVHSPLFLDRIDKNVF-FSFDISGMMNLIFRNWVGKGPELKTSDS 750
>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
Length = 1858
Score = 514 bits (1323), Expect = e-143
Identities = 285/426 (66%), Positives = 319/426 (74%), Gaps = 37/426 (8%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDK +TLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKVTVTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRD 240
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRD
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRD 697
Query: 239 LIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVE 60
LIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E
Sbjct: 698 LIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPE 756
Query: 59 FKTSDS 42
FKTSDS
Sbjct: 757 FKTSDS 762
>ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia kobus]
Length = 1858
Score = 514 bits (1323), Expect = e-143
Identities = 285/426 (66%), Positives = 319/426 (74%), Gaps = 37/426 (8%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDK +TLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKVTVTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEQENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRD 240
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRRD
Sbjct: 638 RVVIYTDNDQNTNNDENTNNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRD 697
Query: 239 LIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVE 60
LIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E
Sbjct: 698 LIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPE 756
Query: 59 FKTSDS 42
FKTSDS
Sbjct: 757 FKTSDS 762
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 510 bits (1314), Expect = e-142
Identities = 274/409 (66%), Positives = 304/409 (74%), Gaps = 21/409 (5%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN Q ENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTF EMIQRKM LYT
Sbjct: 387 WNRPLRYIKNNQLENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFWEMIQRKMSLYT 446
Query: 1028 TEKLSSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQNC 849
TEKLS EELYNHWV TNEQK+NN+S EF+NRIEALDKG LTLDVLEKRTRLC+D+TEQ C
Sbjct: 447 TEKLSPEELYNHWVYTNEQKRNNVSKEFINRIEALDKGSLTLDVLEKRTRLCNDKTEQQC 506
Query: 848 LPKIYDPFLNGSYRGTIKELYSRSSMNDDFITSIET----IWRNKFHDIFTADYREFE-- 687
LPK+YDPFLNG YRGTIK++ S S MND ITSIE +W NK H I DYREFE
Sbjct: 507 LPKVYDPFLNGPYRGTIKKVSSSSIMNDYLITSIENSIEKLWINKIHGILPTDYREFEQK 566
Query: 686 -----------LTNIDNLLTSINEFAGES--SPNLKDPSLFSEQGKFF--DSENKAKYFF 552
T+I + LT I++FAGES S N K L +EQ + + D K+ F
Sbjct: 567 EKIDTFDGKSLSTDIFHFLTPISKFAGESTTSLNWKGLPLLAEQERNYSKDQAKYLKFLF 626
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
AAVTTD N+Q R KSI + EI KKVPRW+YKL DDL+ ED IRSRKAK
Sbjct: 627 AAVTTDPNNQIIRNKSIVINEICKKVPRWSYKLIDDLEQQEGEYEEESAEDHQIRSRKAK 686
Query: 371 RVVIFTDNEQNANTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRKTVTW 192
RVVIFTDNE + NT+T NTS+R+ EVALIRYSQQ DFRRD+IKGSMR QRRK V W
Sbjct: 687 RVVIFTDNEPDTNTHTNTNNTSDRDEVEEVALIRYSQQPDFRRDIIKGSMRAQRRKIVIW 746
Query: 191 ELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSD 45
ELFQ+NVHSPLFLD+ID KTF F+FDIS M IFRN GK + KTSD
Sbjct: 747 ELFQANVHSPLFLDKID-KTFFFSFDISEMTKFIFRNCMGKNTKLKTSD 794
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 510 bits (1313), Expect = e-142
Identities = 277/410 (67%), Positives = 316/410 (77%), Gaps = 21/410 (5%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF E+IQRKM LYT
Sbjct: 337 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEIIQRKMSLYT 396
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
T+KL S E+ YNHWV TNEQK++NLSNEF+NRIEALD+G LTLDVLEK TRLC++E EQ
Sbjct: 397 TDKLLSPEDPYNHWVYTNEQKRHNLSNEFINRIEALDRGTLTLDVLEKSTRLCNNENEQE 456
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
PKIYDPFLNG YRGT K++YSRS M DD IT SIE +W NK HDIF DYREFE
Sbjct: 457 FFPKIYDPFLNGPYRGTTKKVYSRSIM-DDSITWTEDSIEMVWINKIHDIFPNDYREFEQ 515
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSIN+FAGES+P NLK +L +EQ + DSEN+ K+
Sbjct: 516 KMDLFNGESLSTDIGHSLTSINKFAGESAPNLNLKGLALLAEQRR-LDSENQTKCLKFLS 574
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT + K IG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 575 DVVTTDPNDQTIQNKYIGIEEIGKKVPRWSYKLTDHLEEQEKENEEESTEDHGIRSRKAK 634
Query: 371 RVVIFTDNEQNANTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSMRTQRRKTVTW 192
RVVI+TDN+Q NTNT ++N + A E+ALIRYSQQSDFRRDLIKGSMR QRRKTVTW
Sbjct: 635 RVVIYTDNDQ--NTNTYTSTSTNSDQAEELALIRYSQQSDFRRDLIKGSMRAQRRKTVTW 692
Query: 191 ELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
E+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG EFKTSDS
Sbjct: 693 EMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPEFKTSDS 741
>ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata]
Length = 1858
Score = 509 bits (1312), Expect = e-142
Identities = 282/426 (66%), Positives = 318/426 (74%), Gaps = 37/426 (8%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K++YSRS M DD IT SIE +W NK H IF YREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKVYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNHYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ E GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEEGNEEESTEGHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRD 240
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQSDFRR+
Sbjct: 638 RVVIYTDNDQNTNNDQNTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRN 697
Query: 239 LIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVE 60
LIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KTF F+FDISGM+N IFRN GKG E
Sbjct: 698 LIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTFFFSFDISGMMNLIFRNWVGKGPE 756
Query: 59 FKTSDS 42
KTSDS
Sbjct: 757 LKTSDS 762
>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
Length = 1863
Score = 509 bits (1311), Expect = e-142
Identities = 283/432 (65%), Positives = 318/432 (73%), Gaps = 43/432 (9%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG +TLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTVTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLN SYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNRSYRGTTKKRYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSFNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI K+VPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKRVPRWSYKLTDHLEQQEEENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------------NTNTVPKNTSNRNPAAEVALIRYSQQ 258
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQ
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNTNNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQ 697
Query: 257 SDFRRDLIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNL 78
SDFRRDLIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KT F+FDISGM+N IFRN
Sbjct: 698 SDFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTLFFSFDISGMMNLIFRNW 756
Query: 77 TGKGVEFKTSDS 42
GKG EFKTSDS
Sbjct: 757 VGKGPEFKTSDS 768
>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
Ycf1 [Magnolia denudata]
Length = 1863
Score = 509 bits (1311), Expect = e-142
Identities = 283/432 (65%), Positives = 318/432 (73%), Gaps = 43/432 (9%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG +TLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTVTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLN SYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNRSYRGTTKKRYSRSIM-DDSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSFNLKGFALLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI K+VPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKRVPRWSYKLTDHLEQQEEENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------------NTNTVPKNTSNRNPAAEVALIRYSQQ 258
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQ
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNTNNDQNTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQ 697
Query: 257 SDFRRDLIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNL 78
SDFRRDLIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KT F+FDISGM+N IFRN
Sbjct: 698 SDFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTLFFSFDISGMMNLIFRNW 756
Query: 77 TGKGVEFKTSDS 42
GKG EFKTSDS
Sbjct: 757 VGKGPEFKTSDS 768
>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1863
Score = 509 bits (1310), Expect = e-141
Identities = 283/432 (65%), Positives = 318/432 (73%), Gaps = 43/432 (9%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITRTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQTR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ E+ GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEAENEEESTENHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------------NTNTVPKNTSNRNPAAEVALIRYSQQ 258
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQ
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNTNNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQ 697
Query: 257 SDFRRDLIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNL 78
SDFRRDLIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRIDK F F+FDISGM+N IFRN
Sbjct: 698 SDFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLFLDRIDKNVF-FSFDISGMMNLIFRNW 756
Query: 77 TGKGVEFKTSDS 42
GKG E KTSDS
Sbjct: 757 VGKGSELKTSDS 768
>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
photosystem I assembly protein Ycf1 (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 508 bits (1309), Expect = e-141
Identities = 283/432 (65%), Positives = 318/432 (73%), Gaps = 43/432 (9%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
CLPKIYDPFLNGSYRGT K+ YSRS M DD IT SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIM-DDSITRTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + LTSI+E AGES+P NLK +L EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLTSISELAGESTPSLNLKGFALLVEQTR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ E+ GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEAENEEESTENHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------------------NTNTVPKNTSNRNPAAEVALIRYSQQ 258
RVVI+TDN+QN NTNT ++N + A EVALIRYSQQ
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNTDNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQ 697
Query: 257 SDFRRDLIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNL 78
SDFRRDLIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KT F+FDISGM+N IFRN
Sbjct: 698 SDFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTLFFSFDISGMMNLIFRNW 756
Query: 77 TGKGVEFKTSDS 42
GKG E KTSDS
Sbjct: 757 VGKGSELKTSDS 768
>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia officinalis]
Length = 1863
Score = 508 bits (1308), Expect = e-141
Identities = 280/431 (64%), Positives = 315/431 (73%), Gaps = 42/431 (9%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALD+G LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDRGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFI---TSIETIWRNKFHDIFTADYREFE-- 687
CLPKIYDPFLNGSYRGT K+ YSRS M D SIE +W NK H IF DYREFE
Sbjct: 460 CLPKIYDPFLNGSYRGTTKKGYSRSIMYDSITRTEDSIEKVWINKIHGIFPNDYREFEQK 519
Query: 686 ---------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFFA 549
T+I + LTSI+E GES+P NLK+ +L EQ + DSEN+ K+
Sbjct: 520 MDLFNGESLSTDIGHSLTSISELVGESTPSLNLKEFALLVEQTR-LDSENQTKCLKFLSD 578
Query: 548 AVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAKR 369
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ E+ GIRSRKAKR
Sbjct: 579 VVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDHLEEQEAENEEESTENHGIRSRKAKR 638
Query: 368 VVIFTDNEQNA----------------------NTNTVPKNTSNRNPAAEVALIRYSQQS 255
VVI+TDN+QN NTNT ++N + A EVALIRYSQQS
Sbjct: 639 VVIYTDNDQNTNNDQNTNNDQNTNNDQNTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQS 698
Query: 254 DFRRDLIKGSMRTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLT 75
DFRRDLIKGSMR QRRKTVTWE+FQ+NVHSPLFLDRID KTF F FDISGM+N IFRN
Sbjct: 699 DFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLFLDRID-KTFFFLFDISGMMNLIFRNWV 757
Query: 74 GKGVEFKTSDS 42
GKG E KTSDS
Sbjct: 758 GKGSELKTSDS 768
>ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia odora]
Length = 1852
Score = 506 bits (1302), Expect = e-140
Identities = 282/420 (67%), Positives = 315/420 (75%), Gaps = 31/420 (7%)
Frame = -1
Query: 1208 WNRPLRYIKNAQFENAVRNEMSQYFFYTCQSDGKQRISFTYPPSLSTFLEMIQRKMFLYT 1029
WNRPLRYIKN +FE VRNEMSQYFF+TC SDGK+RISFTYPPSLSTF EMIQRKM L T
Sbjct: 340 WNRPLRYIKNDRFEKTVRNEMSQYFFHTCPSDGKKRISFTYPPSLSTFGEMIQRKMSLRT 399
Query: 1028 TEKL-SSEELYNHWVSTNEQKKNNLSNEFLNRIEALDKGFLTLDVLEKRTRLCDDETEQN 852
TEKL S E+LYNHWVSTNEQK++NLSNEF+NRIEALDKG LTLDVLEKRTRLC++E EQ
Sbjct: 400 TEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTLTLDVLEKRTRLCNNENEQE 459
Query: 851 CLPKIYDPFLNGSYRGTIKELYSRSSMNDDFIT----SIETIWRNKFHDIFTADYREFE- 687
LPKIYDPFLNGSYRGT K++YSRS M D IT SIE +W NK H IF DYREFE
Sbjct: 460 RLPKIYDPFLNGSYRGTTKKVYSRSIM-DYSITWTEDSIEKVWINKIHGIFPNDYREFEQ 518
Query: 686 ----------LTNIDNLLTSINEFAGESSP--NLKDPSLFSEQGKFFDSENKA---KYFF 552
T+I + L SI+E AGES+P NLK SL EQ + DSEN+ K+
Sbjct: 519 KMDLFNGESLSTDIGHSLPSISELAGESTPSLNLKGFSLLVEQRR-LDSENQTKCLKFLS 577
Query: 551 AAVTTDLNDQTTRKKSIGLKEISKKVPRWAYKLTDDLKXXXXXXXXXXXEDRGIRSRKAK 372
VTTD NDQT +KKSIG++EI KKVPRW+YKLTD L+ ED GIRSRKAK
Sbjct: 578 DVVTTDPNDQTIQKKSIGIEEIGKKVPRWSYKLTDRLEGQEEENEEESTEDHGIRSRKAK 637
Query: 371 RVVIFTDNEQNA----------NTNTVPKNTSNRNPAAEVALIRYSQQSDFRRDLIKGSM 222
RVVI+TDN+QN N NT ++N + A EVALIRYSQQSDFRRDLIKGSM
Sbjct: 638 RVVIYTDNDQNTNNDQNTNNDQNANTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSM 697
Query: 221 RTQRRKTVTWELFQSNVHSPLFLDRIDKKTFLFAFDISGMVNSIFRNLTGKGVEFKTSDS 42
R QRRKTVTWE+FQ NVHSPLFLDRID KTF F+FDISGM+N IFR+ GKG E KTSDS
Sbjct: 698 RAQRRKTVTWEMFQVNVHSPLFLDRID-KTFFFSFDISGMMNLIFRSWVGKGPELKTSDS 756