BLASTX nr result
ID: Cocculus22_contig00010324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010324
(398 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006491716.1| PREDICTED: uncharacterized protein LOC102619... 65 1e-08
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 63 4e-08
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 63 4e-08
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 63 4e-08
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part... 62 6e-08
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 62 8e-08
ref|XP_006405939.1| hypothetical protein EUTSA_v10028029mg [Eutr... 61 1e-07
ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutr... 60 3e-07
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 59 7e-07
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 59 9e-07
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 59 9e-07
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr... 58 1e-06
ref|XP_004489151.1| PREDICTED: capsid protein-like [Cicer arieti... 58 2e-06
>ref|XP_006491716.1| PREDICTED: uncharacterized protein LOC102619662 [Citrus sinensis]
Length = 870
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Frame = +2
Query: 5 RPYRFFKKKQDRSNKF-----DHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSE 169
+PYRFF+KK S F C+ K+KGH+AK CPNK +K +++ + E
Sbjct: 498 KPYRFFRKKSSSSRDFKWRKSSRCFICKKKGHYAKDCPNKREKSIWLVEHLQATTDYSPE 557
Query: 170 -DDLESLFSEQTDPTAETV 223
D+LE FSEQ +P ETV
Sbjct: 558 KDELEFYFSEQDEPNDETV 576
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = +2
Query: 5 RPYRFFKK-----KQDRSNKFDHCYFLKQKGHFAKQCPNKTKKQQSMLD--QVSLKYPCD 163
+PYRFF+K K + K C+ ++KGHFAK CPNK K +++ Q + Y
Sbjct: 939 KPYRFFRKRSSSSKDSKRRKSSRCFICRKKGHFAKDCPNKRAKSIRLVEHLQATTDY-SP 997
Query: 164 SEDDLESLFSEQTDPTAETV 223
+D+LE FSEQ +P ETV
Sbjct: 998 QQDELEFYFSEQDEPNDETV 1017
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = +2
Query: 5 RPYRFFKK-----KQDRSNKFDHCYFLKQKGHFAKQCPNKTKKQQSMLD--QVSLKYPCD 163
+PYRFF+K K + K C+ ++KGHFAK CPNK K +++ Q + Y
Sbjct: 1037 KPYRFFRKRSSSSKDSKRRKSSRCFICRKKGHFAKDCPNKRAKSIRLVEHLQATTDY-SP 1095
Query: 164 SEDDLESLFSEQTDPTAETV 223
+D+LE FSEQ +P ETV
Sbjct: 1096 QQDELEFYFSEQDEPNDETV 1115
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = +2
Query: 5 RPYRFFKK-----KQDRSNKFDHCYFLKQKGHFAKQCPNKTKKQQSMLD--QVSLKYPCD 163
+PYRFF+K K + K C+ ++KGHFAK CPNK K +++ Q + Y
Sbjct: 1050 KPYRFFRKRSSSSKDSKRRKSSRCFICRKKGHFAKDCPNKRAKSIRLVEHLQATTDY-SP 1108
Query: 164 SEDDLESLFSEQTDPTAETV 223
+D+LE FSEQ +P ETV
Sbjct: 1109 QQDELEFYFSEQDEPNDETV 1128
>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
Length = 1101
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 5 RPYRFFKKKQDRS-NKFDHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLE 181
+ ++FF++K+ R K D CY K+KGH+AKQCPNK KK+ +L ++ D + D+E
Sbjct: 559 KKWKFFRRKKQRGYKKSDRCYICKKKGHYAKQCPNK-KKRDILLGYLAQVEDID-DSDIE 616
Query: 182 SLFSEQTDPTAETV 223
S+FS +PT TV
Sbjct: 617 SIFSLDDEPTDNTV 630
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +2
Query: 5 RPYRFFKKKQDRS-NKFDHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLE 181
+ ++FF++K+ R K D CY K+KGH+AKQCPNK KK+ ++L ++ D + ++E
Sbjct: 930 KKWKFFRRKKQRGYKKSDRCYIYKKKGHYAKQCPNK-KKRDNLLRYLAQVEDID-DSNIE 987
Query: 182 SLFSEQTDPTAETV 223
S+FS +PT +TV
Sbjct: 988 SIFSLDDEPTDDTV 1001
>ref|XP_006405939.1| hypothetical protein EUTSA_v10028029mg [Eutrema salsugineum]
gi|557107077|gb|ESQ47392.1| hypothetical protein
EUTSA_v10028029mg [Eutrema salsugineum]
Length = 1145
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 11 YRFFKKKQDRSN-KFDHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESL 187
++FF++K+ R N K D CY K+KGH+ KQCPNK KK+ ++ ++ D + D+ES+
Sbjct: 754 WKFFRRKKQRGNTKSDRCYIWKKKGHYEKQCPNK-KKRDNLFGYLAQVEDID-DSDMESI 811
Query: 188 FSEQTDPTAETV 223
F+ +PT +TV
Sbjct: 812 FTLDDEPTDDTV 823
>ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutrema salsugineum]
gi|557109899|gb|ESQ50196.1| hypothetical protein
EUTSA_v10002230mg [Eutrema salsugineum]
Length = 469
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 11 YRFFKKKQDRS-NKFDHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESL 187
++FF +K+ R K D CY K+KGH+AKQCPNK KK+ ++L ++ ++ + D+ES+
Sbjct: 214 WKFFTRKKQRGYKKSDRCYICKKKGHYAKQCPNK-KKRDNLLGYLA-QFEDIDDSDIESI 271
Query: 188 FSEQTDPTAETV 223
FS +PT + V
Sbjct: 272 FSLDDEPTDDIV 283
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 14 RFFKKKQDRSNKFDH-CYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESLF 190
+FFK+K R K D C+ +KGHF+K+CPNK+ K M++ + E DLESLF
Sbjct: 492 KFFKRKPFRGKKEDQRCFVCGEKGHFSKRCPNKSNKAAKMINSLQ-----PLEGDLESLF 546
Query: 191 SEQTDPTAETV 223
SEQ+ +T+
Sbjct: 547 SEQSSADEDTI 557
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 14 RFFKKKQDRSNKFDH-CYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESLF 190
+FFKKK R K + C+ +KGHF+K+CPNKT K +++ + E DLESL+
Sbjct: 1052 KFFKKKPFRGKKENQRCFVCGEKGHFSKRCPNKTNKAAKLINSLQ-----PLEGDLESLY 1106
Query: 191 SEQTDPTAETV 223
SEQ+ ET+
Sbjct: 1107 SEQSSADEETI 1117
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 14 RFFKKKQDRSNKFDH-CYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESLF 190
+FFKKK R K + C+ +KGHF+K+CPNKT K +++ + E DLESL+
Sbjct: 211 KFFKKKPFRGKKENQRCFVCGEKGHFSKRCPNKTSKAAKLINSLQ-----PLEGDLESLY 265
Query: 191 SEQTDPTAETV 223
SEQ+ ET+
Sbjct: 266 SEQSSADEETI 276
>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
gi|557107078|gb|ESQ47393.1| hypothetical protein
EUTSA_v10028344mg [Eutrema salsugineum]
Length = 1508
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 5 RPYRFFKKKQDRS-NKFDHCYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLE 181
+ ++FF++K+ R K D CY K+K H+AKQCPNK KK+ ++ ++ D + D+E
Sbjct: 535 KKWKFFRRKKQRGYTKSDRCYICKKKRHYAKQCPNK-KKRDYLIGYLAQVEDID-DSDIE 592
Query: 182 SLFSEQTDPTAETV 223
S+FS PT +TV
Sbjct: 593 SIFSLDDGPTDDTV 606
>ref|XP_004489151.1| PREDICTED: capsid protein-like [Cicer arietinum]
Length = 179
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 14 RFFKKKQDRSNKFDH-CYFLKQKGHFAKQCPNKTKKQQSMLDQVSLKYPCDSEDDLESLF 190
+FFK+K R K + C+ +KGHF+K+CPNKT K +++ + E DLESL+
Sbjct: 93 KFFKRKPFRGKKENQRCFVCGEKGHFSKRCPNKTNKAAKLINSLQ-----PLEGDLESLY 147
Query: 191 SEQTDPTAETV 223
SEQ+ ET+
Sbjct: 148 SEQSSANEETI 158