BLASTX nr result
ID: Cocculus22_contig00010251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010251
(410 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004288599.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|XP_007217406.1| hypothetical protein PRUPE_ppa024153mg [Prun... 87 3e-15
ref|XP_006372553.1| pentatricopeptide repeat-containing family p... 86 5e-15
gb|EXB95905.1| hypothetical protein L484_004954 [Morus notabilis] 86 7e-15
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat... 84 2e-14
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat... 84 2e-14
ref|XP_002532531.1| pentatricopeptide repeat-containing protein,... 84 2e-14
ref|XP_006482079.1| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citr... 84 3e-14
ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat... 81 1e-13
ref|XP_006352441.1| PREDICTED: putative pentatricopeptide repeat... 79 9e-13
ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat... 78 1e-12
ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat... 77 3e-12
ref|XP_003616261.1| Pentatricopeptide repeat-containing protein ... 76 6e-12
ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [S... 74 2e-11
ref|XP_007141926.1| hypothetical protein PHAVU_008G237700g [Phas... 73 4e-11
tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea m... 73 5e-11
tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea m... 73 5e-11
ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat... 73 5e-11
>ref|XP_004288599.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Fragaria vesca subsp. vesca]
Length = 561
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGD----KELHSEQGLVSDFA 168
GLCKQGQMK GVVPDD+TYNILLEGH KHG+ ++L SE+GLV D+A
Sbjct: 483 GLCKQGQMKNANMLLNAMINVGVVPDDITYNILLEGHCKHGNPDDFEKLWSEKGLVLDYA 542
Query: 169 TYTSLIREFTKNSKNRQK 222
+Y SL+++ K+ KNRQK
Sbjct: 543 SYNSLVKDLNKSLKNRQK 560
>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
unnamed protein product [Vitis vinifera]
Length = 592
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCKQGQMK GVVPDD+TYNILLEGH KHG++E L SE+GLV D+
Sbjct: 514 GLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQDYG 573
Query: 169 TYTSLIREFTKNSKNRQK 222
+YTSLI + K K RQK
Sbjct: 574 SYTSLIGDLRKTCKERQK 591
>ref|XP_007217406.1| hypothetical protein PRUPE_ppa024153mg [Prunus persica]
gi|462413556|gb|EMJ18605.1| hypothetical protein
PRUPE_ppa024153mg [Prunus persica]
Length = 605
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCK GQMK GV PDD+TYNILLEGH KHG+ E L S +GLV D+A
Sbjct: 527 GLCKLGQMKNANMLLDAMINLGVAPDDITYNILLEGHCKHGNPEDFDKLRSGKGLVLDYA 586
Query: 169 TYTSLIREFTKNSKNRQK 222
+YTSL+ EF K+SK+R+K
Sbjct: 587 SYTSLVSEFNKSSKDRRK 604
>ref|XP_006372553.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550319182|gb|ERP50350.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 599
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGD----KELHSEQGLVSDFA 168
GLCKQGQ+K GVVPDD+TYNILL+GH KHG + + +E GLVSD+A
Sbjct: 521 GLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYA 580
Query: 169 TYTSLIREFTKNSKNRQK 222
+Y SL+ E TK SK+RQK
Sbjct: 581 SYRSLLHELTKASKDRQK 598
>gb|EXB95905.1| hypothetical protein L484_004954 [Morus notabilis]
Length = 620
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDK----ELHSEQGLVSDFA 168
GLCK+GQM+ GV+PDD+TYNILLEGH KHG++ +L E+GLVSD+A
Sbjct: 542 GLCKKGQMRNADMLLDAMLNVGVIPDDITYNILLEGHCKHGNRADFDKLRRERGLVSDYA 601
Query: 169 TYTSLIREFTKNSKNRQK 222
+Y SL+ + +K+SK+RQK
Sbjct: 602 SYASLVGKSSKSSKDRQK 619
>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCKQGQMK GV PDD+TYNILLEGH K+G E L +E+GL+ D+A
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYA 571
Query: 169 TYTSLIREFTKNSKNRQK 222
YTSL+ E+ K+ K+RQK
Sbjct: 572 YYTSLVSEYNKSLKDRQK 589
>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCKQGQMK GV PDD+TYNILLEGH K+G E L +E+GL+ D+A
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYA 571
Query: 169 TYTSLIREFTKNSKNRQK 222
YTSL+ E+ K+ K+RQK
Sbjct: 572 YYTSLVSEYNKSLKDRQK 589
>ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527743|gb|EEF29847.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 212
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGD----KELHSEQGLVSDFA 168
G CKQ QMK GVVPDD+TYNILLEGH KHG+ +L SE+G+V+D+A
Sbjct: 134 GYCKQSQMKNANMLLDAMMNLGVVPDDITYNILLEGHCKHGNLQDFHKLQSEKGVVADYA 193
Query: 169 TYTSLIREFTKNSKNRQK 222
+Y SL+ E +++SK+RQK
Sbjct: 194 SYKSLLNELSRSSKDRQK 211
>ref|XP_006482079.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Citrus sinensis]
Length = 586
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCK GQ+K GVVPDD+TYNILLEGH KHG+ E L SE+GLVSD+A
Sbjct: 511 GLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSEKGLVSDYA 570
Query: 169 TYTSLIREFTKNSKNRQK 222
YTSL+ +K+SK RQK
Sbjct: 571 CYTSLV---SKSSKYRQK 585
>ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citrus clementina]
gi|557532610|gb|ESR43793.1| hypothetical protein
CICLE_v10011347mg [Citrus clementina]
Length = 586
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCK GQ+K GVVPDD+TYNILLEGH KHG+ E L SE+GLVSD+A
Sbjct: 511 GLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSEKGLVSDYA 570
Query: 169 TYTSLIREFTKNSKNRQK 222
YTSL+ +K+SK RQK
Sbjct: 571 CYTSLV---SKSSKYRQK 585
>ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLCKQGQMK GV P+D+TYNILL+GHSKHG +SE+GLV+D+A
Sbjct: 537 GLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLVTDYA 596
Query: 169 TYTSLIREFTKNSKNRQK 222
+YT+L+ E +K SK+ K
Sbjct: 597 SYTALVNESSKTSKDHLK 614
>ref|XP_006352441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Solanum tuberosum]
Length = 489
Score = 78.6 bits (192), Expect = 9e-13
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLC+QGQM+ G+ PDD+TYNILLEGH KHG+ + L E GLV D+A
Sbjct: 408 GLCRQGQMRNAEMLLQAMLNLGLNPDDITYNILLEGHCKHGNPDEYDKLRGEMGLVHDYA 467
Query: 169 TYTSLIREFTKNSKNRQKST 228
TYTSL+ +++SK + K +
Sbjct: 468 TYTSLVGSLSRSSKRQPKKS 487
>ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Solanum lycopersicum]
Length = 608
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDKE----LHSEQGLVSDFA 168
GLC+QGQM+ G+ PDD+TYNILLEGH KHG+ + L E GLV D+A
Sbjct: 527 GLCRQGQMRNAEMLLQAMLNLGLNPDDITYNILLEGHCKHGNPDEYDKLRGEMGLVHDYA 586
Query: 169 TYTSLIREFTKNSKNRQKST 228
TYTSL+ ++ SK + K +
Sbjct: 587 TYTSLVGSLSRTSKRQPKKS 606
>ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cicer arietinum]
Length = 603
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHG---DKELHS-EQGLVSDFA 168
GLCKQGQMK GVVP+D+T+NILL+GH KH D ++ S E+GLVSD+A
Sbjct: 525 GLCKQGQMKNAKMLLDAMLNLGVVPNDITFNILLDGHCKHASSFDFDIFSGEKGLVSDYA 584
Query: 169 TYTSLIREFTKNSKNRQKS 225
+YT+L+ E K SK+ KS
Sbjct: 585 SYTALVNESNKISKDHLKS 603
>ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 811
Score = 75.9 bits (185), Expect = 6e-12
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGD----KELHSEQGLVSDFA 168
G CKQGQMK VVP+D+T+NILL+GH KHG K + E+GLVSD+A
Sbjct: 515 GFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYA 574
Query: 169 TYTSLIREFTKNSKNRQKS 225
+YT+L+ E K SK++ KS
Sbjct: 575 SYTALVNESIKISKDQLKS 593
>ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein
SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGD----KELHSEQGLVSDFA 168
G C GQMK GV PDD+TYNILL+GH KHG +EL S +G+VSDF
Sbjct: 533 GFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVSDFG 592
Query: 169 TYTSLIREFTKNSKNR 216
YTSLI EF K +
Sbjct: 593 LYTSLINEFVKKKSTK 608
>ref|XP_007141926.1| hypothetical protein PHAVU_008G237700g [Phaseolus vulgaris]
gi|561015059|gb|ESW13920.1| hypothetical protein
PHAVU_008G237700g [Phaseolus vulgaris]
Length = 609
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHGDK----ELHSEQGLVSDFA 168
G+CK GQMK GV P+D+TYNILL+GH KH +SE+GLV+D+A
Sbjct: 531 GMCKLGQMKNAKMLLDAMLNLGVAPNDITYNILLDGHCKHESSVDVDTFNSEKGLVTDYA 590
Query: 169 TYTSLIREFTKNSKNRQK 222
TY +L+ E +K SK+R K
Sbjct: 591 TYKALLNESSKASKDRLK 608
>tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHG----DKELHSEQGLVSDFA 168
G C GQMK GV P+D+TYNILL+GH KHG +EL S +G+VSDF
Sbjct: 403 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFG 462
Query: 169 TYTSLIREFTK 201
YTSLI EF K
Sbjct: 463 VYTSLINEFVK 473
>tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHG----DKELHSEQGLVSDFA 168
G C GQMK GV P+D+TYNILL+GH KHG +EL S +G+VSDF
Sbjct: 531 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFG 590
Query: 169 TYTSLIREFTK 201
YTSLI EF K
Sbjct: 591 VYTSLINEFVK 601
>ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 GLCKQGQMKXXXXXXXXXXXXGVVPDDVTYNILLEGHSKHG----DKELHSEQGLVSDFA 168
GLCK GQMK GV PDD+TYNILL+G KHG +EL S +G+V DFA
Sbjct: 474 GLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVPDFA 533
Query: 169 TYTSLIREFTK 201
YTSLI E K
Sbjct: 534 VYTSLISELAK 544